FFCP PHASE1:Hg19::chr20:34357224..34357250,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C446|description=CAGE_peak_at_chr20:34357224..34357250,+|id=chr20:34357224..34357250,+|ontology_enrichment_celltype=CL:0002057!2.99e-38!42;CL:0000860!4.37e-36!45;CL:0000766!7.97e-30!76;CL:0000738!1.28e-29!140;CL:0000557!1.89e-26!71;CL:0002009!4.59e-24!65;CL:0000839!8.89e-23!70;CL:0002194!2.10e-22!63;CL:0000576!2.10e-22!63;CL:0000040!2.10e-22!63;CL:0000559!2.10e-22!63;CL:0002031!2.14e-22!124;CL:0002087!5.47e-22!119;CL:0000037!4.02e-21!172;CL:0000566!4.02e-21!172;CL:0002032!8.77e-19!165;CL:0000837!8.77e-19!165;CL:0000988!1.98e-18!182;CL:0000763!4.61e-18!112;CL:0000049!4.61e-18!112;CL:0002393!1.45e-10!9;CL:0002397!1.45e-10!9;CL:0000134!3.67e-10!358;CL:0000219!1.16e-09!390;CL:0002320!2.29e-09!365;CL:0000034!6.41e-08!444;CL:0000048!6.87e-08!430;CL:0000094!1.04e-07!8;CL:0000723!2.42e-07!436|ontology_enrichment_celltype_v019=CL:0000860;3.63e-40;33!CL:0002057;3.63e-40;33!CL:0000576;3.09e-33;48!CL:0000766;2.42e-31;69!CL:0000473;1.40e-27;39!CL:0000234;1.40e-27;39!CL:0000094;7.62e-20;8!CL:0002393;4.93e-19;6!CL:0002397;4.93e-19;6!CL:0000081;4.08e-14;11!CL:0002087;7.08e-13;104!CL:0000763;1.02e-12;100!CL:0000738;4.32e-12;136!CL:0000775;8.84e-11;3!CL:0000767;1.34e-10;3!CL:0000226;3.82e-10;3!CL:0000842;3.82e-10;3!CL:0000623;5.21e-10;3!CL:0001014;4.02e-07;2!CL:0001016;4.02e-07;2!CL:0000988;6.64e-07;177!CL:0000097;6.87e-07;5|ontology_enrichment_celltype_v019_2=CL:0000860,3.62e-64,42;CL:0002057,3.62e-64,42;CL:0000766,5.48e-64,72;CL:0000473,4.49e-55,48;CL:0000234,4.49e-55,48;CL:0000557,2.48e-54,67;CL:0000738,4.05e-53,136;CL:0002009,1.24e-46,61;CL:0000839,4.05e-46,66;CL:0000763,4.87e-46,108;CL:0000049,4.87e-46,108;CL:0000037,1.70e-42,168;CL:0002194,2.36e-42,59;CL:0000576,2.36e-42,59;CL:0000040,2.36e-42,59;CL:0000559,2.36e-42,59;CL:0000988,1.05e-39,177;CL:0002032,5.78e-39,161;CL:0000837,5.78e-39,161;CL:0002031,2.86e-37,120;CL:0002087,6.83e-35,115;CL:0002393,9.12e-22,9;CL:0002397,9.12e-22,9;CL:0000094,6.68e-20,8;CL:0000134,4.61e-17,354;CL:0002320,1.77e-16,361;CL:0000219,2.04e-14,386;CL:0000081,3.71e-14,11;CL:0000048,6.70e-12,427;CL:0000723,1.49e-11,433;CL:0000034,4.17e-11,441;CL:0000775,7.54e-11,3;CL:0000767,1.35e-10,3;CL:0000226,3.08e-10,3;CL:0000842,3.08e-10,3;CL:0000623,5.39e-10,3;CL:0000825,5.39e-10,3;CL:0001014,5.32e-07,2;CL:0001016,5.32e-07,2;CL:0000097,7.02e-07,5;CL:0002028,7.02e-07,5|ontology_enrichment_development_v019=CL:0002057;6.27e-42;42!CL:0000049;2.31e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.04e-24!80;UBERON:0002390!2.37e-24!102;UBERON:0003061!2.37e-24!102;UBERON:0001474!8.80e-23!86;UBERON:0002193!7.95e-22!112;UBERON:0004765!2.06e-17!101;UBERON:0001434!2.06e-17!101;UBERON:0002405!3.30e-17!115;UBERON:0003081!4.67e-09!216;UBERON:0002384!5.93e-09!375;UBERON:0002204!3.04e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.06e-47,76;UBERON:0002390,6.45e-46,98;UBERON:0003061,6.45e-46,98;UBERON:0001474,1.01e-42,82;UBERON:0002193,1.05e-40,108;UBERON:0004765,4.26e-38,90;UBERON:0002405,1.44e-36,93;UBERON:0001434,2.36e-33,100;UBERON:0003081,5.31e-19,203;UBERON:0002204,3.11e-16,167;UBERON:0002384,1.11e-15,371;UBERON:0000926,3.40e-09,315;UBERON:0004120,3.40e-09,315;UBERON:0006603,3.40e-09,315|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.0821005894499457,0.0787107813136792,5.90046415273356,2.68680578668049,5.41856431606266,0,0,0,0,0,0.293600439334847,3.32397245119126,1.00272223735071,3.68918480216948,0,0,0,1.16318591023652,1.13362783106643,1.69808842831471,0.464858073811369,0.411167888021826,5.57471467611186,0.28769239232215,0.512321413058201,4.49316236788312,2.41321976515633,3.87290810150296,2.70852973188684,1.69418105588344,0.545812300115692,6.96642801779762,2.75475503133812,2.24650318953266,10.2293940127847,0.329851300186716,0.199463657621632,1.27867425159808,0.870627715885752,0.56738522469114,1.24564449799115,1.50749199154046,1.5644487552606,1.95469960234605,0,1.10483290796269,3.16462387440884,5.70389273042243,4.889898899196,4.82214884669265,10.1095768031846,6.15725260650176,4.8217676009124,5.98526761856622,0.99458338599545,2.19196984517561,0,0,0,1.28019066769952,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,1.02800749499755,0,0,0,1.94826728407911,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.604820229674197,1.60464117470104,1.01377082717959,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0.949265659568129,0,11.8602375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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C446 | |||
|description=CAGE_peak_at_chr20:34357224..34357250,+ | |||
|id=chr20:34357224..34357250,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.99e-38!42;CL:0000860!4.37e-36!45;CL:0000766!7.97e-30!76;CL:0000738!1.28e-29!140;CL:0000557!1.89e-26!71;CL:0002009!4.59e-24!65;CL:0000839!8.89e-23!70;CL:0002194!2.10e-22!63;CL:0000576!2.10e-22!63;CL:0000040!2.10e-22!63;CL:0000559!2.10e-22!63;CL:0002031!2.14e-22!124;CL:0002087!5.47e-22!119;CL:0000037!4.02e-21!172;CL:0000566!4.02e-21!172;CL:0002032!8.77e-19!165;CL:0000837!8.77e-19!165;CL:0000988!1.98e-18!182;CL:0000763!4.61e-18!112;CL:0000049!4.61e-18!112;CL:0002393!1.45e-10!9;CL:0002397!1.45e-10!9;CL:0000134!3.67e-10!358;CL:0000219!1.16e-09!390;CL:0002320!2.29e-09!365;CL:0000034!6.41e-08!444;CL:0000048!6.87e-08!430;CL:0000094!1.04e-07!8;CL:0000723!2.42e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.63e-40;33!CL:0002057;3.63e-40;33!CL:0000576;3.09e-33;48!CL:0000766;2.42e-31;69!CL:0000473;1.40e-27;39!CL:0000234;1.40e-27;39!CL:0000094;7.62e-20;8!CL:0002393;4.93e-19;6!CL:0002397;4.93e-19;6!CL:0000081;4.08e-14;11!CL:0002087;7.08e-13;104!CL:0000763;1.02e-12;100!CL:0000738;4.32e-12;136!CL:0000775;8.84e-11;3!CL:0000767;1.34e-10;3!CL:0000226;3.82e-10;3!CL:0000842;3.82e-10;3!CL:0000623;5.21e-10;3!CL:0001014;4.02e-07;2!CL:0001016;4.02e-07;2!CL:0000988;6.64e-07;177!CL:0000097;6.87e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.62e-64,42;CL:0002057,3.62e-64,42;CL:0000766,5.48e-64,72;CL:0000473,4.49e-55,48;CL:0000234,4.49e-55,48;CL:0000557,2.48e-54,67;CL:0000738,4.05e-53,136;CL:0002009,1.24e-46,61;CL:0000839,4.05e-46,66;CL:0000763,4.87e-46,108;CL:0000049,4.87e-46,108;CL:0000037,1.70e-42,168;CL:0002194,2.36e-42,59;CL:0000576,2.36e-42,59;CL:0000040,2.36e-42,59;CL:0000559,2.36e-42,59;CL:0000988,1.05e-39,177;CL:0002032,5.78e-39,161;CL:0000837,5.78e-39,161;CL:0002031,2.86e-37,120;CL:0002087,6.83e-35,115;CL:0002393,9.12e-22,9;CL:0002397,9.12e-22,9;CL:0000094,6.68e-20,8;CL:0000134,4.61e-17,354;CL:0002320,1.77e-16,361;CL:0000219,2.04e-14,386;CL:0000081,3.71e-14,11;CL:0000048,6.70e-12,427;CL:0000723,1.49e-11,433;CL:0000034,4.17e-11,441;CL:0000775,7.54e-11,3;CL:0000767,1.35e-10,3;CL:0000226,3.08e-10,3;CL:0000842,3.08e-10,3;CL:0000623,5.39e-10,3;CL:0000825,5.39e-10,3;CL:0001014,5.32e-07,2;CL:0001016,5.32e-07,2;CL:0000097,7.02e-07,5;CL:0002028,7.02e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.27e-42;42!CL:0000049;2.31e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.04e-24!80;UBERON:0002390!2.37e-24!102;UBERON:0003061!2.37e-24!102;UBERON:0001474!8.80e-23!86;UBERON:0002193!7.95e-22!112;UBERON:0004765!2.06e-17!101;UBERON:0001434!2.06e-17!101;UBERON:0002405!3.30e-17!115;UBERON:0003081!4.67e-09!216;UBERON:0002384!5.93e-09!375;UBERON:0002204!3.04e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.06e-47,76;UBERON:0002390,6.45e-46,98;UBERON:0003061,6.45e-46,98;UBERON:0001474,1.01e-42,82;UBERON:0002193,1.05e-40,108;UBERON:0004765,4.26e-38,90;UBERON:0002405,1.44e-36,93;UBERON:0001434,2.36e-33,100;UBERON:0003081,5.31e-19,203;UBERON:0002204,3.11e-16,167;UBERON:0002384,1.11e-15,371;UBERON:0000926,3.40e-09,315;UBERON:0004120,3.40e-09,315;UBERON:0006603,3.40e-09,315 | |||
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| |||
|short_description=p@chr20:34357224..34357250,+ | |||
}} |
Revision as of 08:14, 12 September 2013
Short description: | p@chr20:34357224..34357250, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:34357224..34357250, + |
Coexpression cluster: | C446_Neutrophils_Mast_Eosinophils_Whole_CD14_immature_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.06e-47 | 76 |
hematopoietic system | 6.45e-46 | 98 |
blood island | 6.45e-46 | 98 |
bone element | 1.01e-42 | 82 |
hemolymphoid system | 1.05e-40 | 108 |
skeletal element | 4.26e-38 | 90 |
immune system | 1.44e-36 | 93 |
skeletal system | 2.36e-33 | 100 |
lateral plate mesoderm | 5.31e-19 | 203 |
musculoskeletal system | 3.11e-16 | 167 |
connective tissue | 1.11e-15 | 371 |
mesoderm | 3.40e-09 | 315 |
mesoderm-derived structure | 3.40e-09 | 315 |
presumptive mesoderm | 3.40e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.