FFCP PHASE1:Hg19::chr20:30310021..30310038,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=598|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=992|TSSclassifier=W|UniProt=|association_with_transcript=94bp_to_uc002wwk.2_5end|description=CAGE_peak_18_at_BCL2L1_5end|id=chr20:30310021..30310038,-|ontology_enrichment_celltype=CL:0000066!1.04e-17!254;CL:0000076!6.90e-13!62;CL:0000220!4.49e-08!246;CL:0002321!9.22e-08!248;CL:0000223!4.22e-07!59|ontology_enrichment_celltype_v019=CL:0000650;1.45e-08;2!CL:1000500;1.45e-08;2!CL:1000618;1.45e-08;2!CL:1001318;1.45e-08;2!CL:0002173;1.45e-08;2|ontology_enrichment_celltype_v019_2=CL:0000066,2.71e-11,253;CL:0000650,1.67e-08,2;CL:1000500,1.67e-08,2;CL:1000618,1.67e-08,2;CL:1001318,1.67e-08,2;CL:0002173,1.67e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.82e-09!106;DOID:0050687!3.73e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,6.90e-07,106|ontology_enrichment_uberon=UBERON:0000119!7.98e-07!312;UBERON:0000483!8.99e-07!309|ontology_enrichment_uberon_v019=UBERON:0000178;3.75e-09;15!UBERON:0000179;3.75e-09;15!UBERON:0000463;3.75e-09;15!UBERON:0003567;1.45e-08;2!UBERON:0003838;1.45e-08;2!UBERON:0003586;1.45e-08;2!UBERON:0005169;1.45e-08;2!UBERON:0002321;1.45e-08;2!UBERON:0005215;1.45e-08;2!UBERON:0002303;1.45e-08;2!UBERON:0002319;1.45e-08;2!UBERON:0004909;3.48e-08;2!UBERON:0000490;1.66e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.73e-09,15;UBERON:0000179,3.73e-09,15;UBERON:0000463,3.73e-09,15;UBERON:0003567,1.67e-08,2;UBERON:0003838,1.67e-08,2;UBERON:0003586,1.67e-08,2;UBERON:0004909,1.67e-08,2;UBERON:0005169,1.67e-08,2;UBERON:0002321,1.67e-08,2;UBERON:0005215,1.67e-08,2;UBERON:0002303,1.67e-08,2;UBERON:0002319,1.67e-08,2|phase1_expression=0.363356758541113,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.246301768349837,0.157421562627358,0,0,0,0,0,0.369754010166788,0.309868802321207,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.72038491523742,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0,0,0,1.78886166630035,0.860234595106124,0.694281003215189,0,0.419499436209906,0.550236083880135,1.8809546988313,0.516833518338658,0.71153252537342,0,0.805658634218294,0,2.68468263302986,0.735326160691737,0,0.446498641420399,0,0.337834441449967,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0.624320153660641,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19769940212095,0,1.20725313949488,0,0.603173834469785,0.370353780634118,0,0,1.44331342025273,0,0,0.577465791044295,0.462985512576611,0,0,0,0.246217006087397,0,0,2.81201501960331,0.16798212819886,0.283550194484773,0.895585227028483,0,3.4504441124869,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0,0,0,0.65147236858747,0.355391948742546,0,0,0.871533458600294,0,0,0,0,0,0,0,0.723906533337896,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,1.5156378572313,0,0.907170879989041,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,2.05461064305758,0.601519410909855,0.368323955743585,0,0,0.131124414959424,0.902399225814824,1.61732207919271,0.784349769176855,0,0.73886140225013,0,0.170093705276516,0,0,1.35473218771926,2.00675909541941,0,0,0.447749509444357,1.09629938322967,0.261435451024901,0,0.328014645699706,0.976135183992909,0.206082023295445,0,0,1.14853107599234,0.650060246036521,1.6068392984416,0.386682873168488,0,0,0.137836572484531,0,0.290033387828457,0.340906509664404,0.178064071293475,0,0.576570202095319,0,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0,0,0.316379424718726,0,0.511795582622668,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0,0.141405431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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=598 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=992 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=94bp_to_uc002wwk.2_5end | |||
|description=CAGE_peak_18_at_BCL2L1_5end | |||
|id=chr20:30310021..30310038,- | |||
|ontology_enrichment_celltype=CL:0000066!1.04e-17!254;CL:0000076!6.90e-13!62;CL:0000220!4.49e-08!246;CL:0002321!9.22e-08!248;CL:0000223!4.22e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000650;1.45e-08;2!CL:1000500;1.45e-08;2!CL:1000618;1.45e-08;2!CL:1001318;1.45e-08;2!CL:0002173;1.45e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.71e-11,253;CL:0000650,1.67e-08,2;CL:1000500,1.67e-08,2;CL:1000618,1.67e-08,2;CL:1001318,1.67e-08,2;CL:0002173,1.67e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.82e-09!106;DOID:0050687!3.73e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.90e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000119!7.98e-07!312;UBERON:0000483!8.99e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.75e-09;15!UBERON:0000179;3.75e-09;15!UBERON:0000463;3.75e-09;15!UBERON:0003567;1.45e-08;2!UBERON:0003838;1.45e-08;2!UBERON:0003586;1.45e-08;2!UBERON:0005169;1.45e-08;2!UBERON:0002321;1.45e-08;2!UBERON:0005215;1.45e-08;2!UBERON:0002303;1.45e-08;2!UBERON:0002319;1.45e-08;2!UBERON:0004909;3.48e-08;2!UBERON:0000490;1.66e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.73e-09,15;UBERON:0000179,3.73e-09,15;UBERON:0000463,3.73e-09,15;UBERON:0003567,1.67e-08,2;UBERON:0003838,1.67e-08,2;UBERON:0003586,1.67e-08,2;UBERON:0004909,1.67e-08,2;UBERON:0005169,1.67e-08,2;UBERON:0002321,1.67e-08,2;UBERON:0005215,1.67e-08,2;UBERON:0002303,1.67e-08,2;UBERON:0002319,1.67e-08,2 | |||
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| |||
|short_description=p18@BCL2L1 | |||
}} |
Revision as of 07:57, 12 September 2013
Short description: | p18@BCL2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_BCL2L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 94bp_to_uc002wwk.2_5end |
EntrezGene: | BCL2L1 |
HGNC: | 992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.71e-11 | 253 |
mesangial cell | 1.67e-08 | 2 |
kidney interstitial cell | 1.67e-08 | 2 |
juxtaglomerular complex cell | 1.67e-08 | 2 |
renal interstitial pericyte | 1.67e-08 | 2 |
extraglomerular mesangial cell | 1.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.73e-09 | 15 |
haemolymphatic fluid | 3.73e-09 | 15 |
organism substance | 3.73e-09 | 15 |
abdomen connective tissue | 1.67e-08 | 2 |
abdominal segment connective tissue | 1.67e-08 | 2 |
trunk connective tissue | 1.67e-08 | 2 |
epithelium of gonad | 1.67e-08 | 2 |
interstitial tissue | 1.67e-08 | 2 |
extraglomerular mesangium | 1.67e-08 | 2 |
kidney interstitium | 1.67e-08 | 2 |
juxtaglomerular apparatus | 1.67e-08 | 2 |
mesangium | 1.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.90e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.