FFCP PHASE1:Hg19::chr20:2795626..2795639,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100288797,128653|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16134,40044|TSSclassifier=S|UniProt=Q6ZPB1,Q8WW34|association_with_transcript=12bp_to_ENST00000380593,ENST00000554164,uc002wgv.1,uc010gat.2_5end|coexpression_cluster_id=C1|description=CAGE_peak_1_at_C20orf141_5end,CAGE_peak_1_at_TMEM239_5end|id=chr20:2795626..2795639,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002174;1.12e-17;1!CL:0000501;1.12e-17;1!CL:0000650;1.22e-09;2!CL:1000500;1.22e-09;2!CL:1000618;1.22e-09;2!CL:1001318;1.22e-09;2!CL:0002173;1.22e-09;2!CL:0000322;7.08e-07;3!CL:0000174;9.37e-07;3|ontology_enrichment_celltype_v019_2=CL:0002174,7.37e-18,1;CL:0000501,7.37e-18,1;CL:0000650,1.22e-09,2;CL:1000500,1.22e-09,2;CL:1000618,1.22e-09,2;CL:1001318,1.22e-09,2;CL:0002173,1.22e-09,2;CL:0000322,7.28e-07,3;CL:0000174,8.15e-07,3|ontology_enrichment_development_v019=UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3910;1.07e-09;2|ontology_enrichment_disease_v019_2=DOID:3910,1.12e-09,2|ontology_enrichment_uberon_v019=UBERON:0004903;1.07e-09;2!UBERON:0002173;1.07e-09;2!UBERON:0002186;1.07e-09;2!UBERON:0003567;1.22e-09;2!UBERON:0003838;1.22e-09;2!UBERON:0003586;1.22e-09;2!UBERON:0005169;1.22e-09;2!UBERON:0002321;1.22e-09;2!UBERON:0005215;1.22e-09;2!UBERON:0002303;1.22e-09;2!UBERON:0002319;1.22e-09;2!UBERON:0000473;1.99e-09;8!UBERON:0003135;4.30e-07;11!UBERON:0004821;7.08e-07;3!UBERON:0007499;7.08e-07;3!UBERON:0003215;7.08e-07;3!UBERON:0010368;7.08e-07;3!UBERON:0009911;7.08e-07;3!UBERON:0002299;7.08e-07;3!UBERON:0006524;7.08e-07;3!UBERON:0008874;7.08e-07;3!UBERON:0002169;7.08e-07;3!UBERON:0004894;7.08e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.12e-09,2;UBERON:0002173,1.12e-09,2;UBERON:0002186,1.12e-09,2;UBERON:0003567,1.22e-09,2;UBERON:0003838,1.22e-09,2;UBERON:0003586,1.22e-09,2;UBERON:0005169,1.22e-09,2;UBERON:0002321,1.22e-09,2;UBERON:0005215,1.22e-09,2;UBERON:0002303,1.22e-09,2;UBERON:0002319,1.22e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0004821,7.28e-07,3;UBERON:0003215,7.28e-07,3;UBERON:0010368,7.28e-07,3;UBERON:0009911,7.28e-07,3;UBERON:0002299,7.28e-07,3;UBERON:0006524,7.28e-07,3;UBERON:0008874,7.28e-07,3;UBERON:0002169,7.28e-07,3;UBERON:0004894,7.28e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,1.00499466102697,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,17.5511961166935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.813795071099207,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.783204629850962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,2.00675909541941,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,4.54617834890261,0.23874448473769,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,1.62971057883012,0.31900115973192,0.0915975934018623,0,0,0.627921025580099,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,4.83836228250648,0,0,0,0.34823682632161,0.698906672968121,0.343972064943233,0,0,0.0821154570532092,0,0,0,0,0,0,0.782205530939212,0.160317640503067,0,0.19980960958213,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0,0.604923695052956,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,1.54400723580486,0.219284049578707,0.530067437837643,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,1.0085253435176,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.354809480650555,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,47.2101289899632,81.4610955674783,0,0,0,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@C20orf141,p1@TMEM239}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=100288797,128653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16134,40044 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZPB1,Q8WW34 | |||
|association_with_transcript=12bp_to_ENST00000380593,ENST00000554164,uc002wgv.1,uc010gat.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_C20orf141_5end,CAGE_peak_1_at_TMEM239_5end | |||
|id=chr20:2795626..2795639,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002174;1.12e-17;1!CL:0000501;1.12e-17;1!CL:0000650;1.22e-09;2!CL:1000500;1.22e-09;2!CL:1000618;1.22e-09;2!CL:1001318;1.22e-09;2!CL:0002173;1.22e-09;2!CL:0000322;7.08e-07;3!CL:0000174;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,7.37e-18,1;CL:0000501,7.37e-18,1;CL:0000650,1.22e-09,2;CL:1000500,1.22e-09,2;CL:1000618,1.22e-09,2;CL:1001318,1.22e-09,2;CL:0002173,1.22e-09,2;CL:0000322,7.28e-07,3;CL:0000174,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;1.07e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.12e-09,2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.07e-09;2!UBERON:0002173;1.07e-09;2!UBERON:0002186;1.07e-09;2!UBERON:0003567;1.22e-09;2!UBERON:0003838;1.22e-09;2!UBERON:0003586;1.22e-09;2!UBERON:0005169;1.22e-09;2!UBERON:0002321;1.22e-09;2!UBERON:0005215;1.22e-09;2!UBERON:0002303;1.22e-09;2!UBERON:0002319;1.22e-09;2!UBERON:0000473;1.99e-09;8!UBERON:0003135;4.30e-07;11!UBERON:0004821;7.08e-07;3!UBERON:0007499;7.08e-07;3!UBERON:0003215;7.08e-07;3!UBERON:0010368;7.08e-07;3!UBERON:0009911;7.08e-07;3!UBERON:0002299;7.08e-07;3!UBERON:0006524;7.08e-07;3!UBERON:0008874;7.08e-07;3!UBERON:0002169;7.08e-07;3!UBERON:0004894;7.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.12e-09,2;UBERON:0002173,1.12e-09,2;UBERON:0002186,1.12e-09,2;UBERON:0003567,1.22e-09,2;UBERON:0003838,1.22e-09,2;UBERON:0003586,1.22e-09,2;UBERON:0005169,1.22e-09,2;UBERON:0002321,1.22e-09,2;UBERON:0005215,1.22e-09,2;UBERON:0002303,1.22e-09,2;UBERON:0002319,1.22e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0004821,7.28e-07,3;UBERON:0003215,7.28e-07,3;UBERON:0010368,7.28e-07,3;UBERON:0009911,7.28e-07,3;UBERON:0002299,7.28e-07,3;UBERON:0006524,7.28e-07,3;UBERON:0008874,7.28e-07,3;UBERON:0002169,7.28e-07,3;UBERON:0004894,7.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,1.00499466102697,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,17.5511961166935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.813795071099207,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.783204629850962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,2.00675909541941,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,4.54617834890261,0.23874448473769,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,1.62971057883012,0.31900115973192,0.0915975934018623,0,0,0.627921025580099,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,4.83836228250648,0,0,0,0.34823682632161,0.698906672968121,0.343972064943233,0,0,0.0821154570532092,0,0,0,0,0,0,0.782205530939212,0.160317640503067,0,0.19980960958213,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0,0.604923695052956,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,1.54400723580486,0.219284049578707,0.530067437837643,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,1.0085253435176,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.354809480650555,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,47.2101289899632,81.4610955674783,0,0,0,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@C20orf141,p1@TMEM239 | |||
}} |
Revision as of 07:55, 12 September 2013
Short description: | p1@C20orf141, p1@TMEM239 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C20orf141_5end, CAGE_peak_1_at_TMEM239_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 12bp_to_ENST00000380593, ENST00000554164, uc002wgv.1, uc010gat.2_5end |
EntrezGene: | 100288797,128653 |
HGNC: | 40044&submit=Submit 16134, 40044 |
UniProt: | Q6ZPB1Q8WW34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 7.37e-18 | 1 |
granulosa cell | 7.37e-18 | 1 |
mesangial cell | 1.22e-09 | 2 |
kidney interstitial cell | 1.22e-09 | 2 |
juxtaglomerular complex cell | 1.22e-09 | 2 |
renal interstitial pericyte | 1.22e-09 | 2 |
extraglomerular mesangial cell | 1.22e-09 | 2 |
pneumocyte | 7.28e-07 | 3 |
steroid hormone secreting cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.12e-09 | 2 |
alveolar duct | 1.12e-09 | 2 |
bronchiole | 1.12e-09 | 2 |
abdomen connective tissue | 1.22e-09 | 2 |
abdominal segment connective tissue | 1.22e-09 | 2 |
trunk connective tissue | 1.22e-09 | 2 |
interstitial tissue | 1.22e-09 | 2 |
extraglomerular mesangium | 1.22e-09 | 2 |
kidney interstitium | 1.22e-09 | 2 |
juxtaglomerular apparatus | 1.22e-09 | 2 |
mesangium | 1.22e-09 | 2 |
testis | 1.99e-09 | 8 |
male reproductive organ | 4.30e-07 | 11 |
pulmonary alveolus epithelium | 7.28e-07 | 3 |
alveolus | 7.28e-07 | 3 |
pulmonary lobule | 7.28e-07 | 3 |
lobule | 7.28e-07 | 3 |
alveolus of lung | 7.28e-07 | 3 |
alveolar system | 7.28e-07 | 3 |
pulmonary acinus | 7.28e-07 | 3 |
alveolar sac | 7.28e-07 | 3 |
alveolar wall | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.12e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.