FFCP PHASE1:Hg19::chr2:241564889..241564932,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2859|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4492|TSSclassifier=W|UniProt=Q9HC97,A8K2J1,B2RA17|association_with_transcript=227bp_to_ENST00000407714,NM_005301_5end|coexpression_cluster_id=C65|description=CAGE_peak_1_at_GPR35_5end|id=chr2:241564889..241564932,+|ontology_enrichment_celltype=CL:0000037!7.42e-65!172;CL:0000566!7.42e-65!172;CL:0002032!7.93e-61!165;CL:0000837!7.93e-61!165;CL:0000988!1.43e-58!182;CL:0000763!5.52e-57!112;CL:0000049!5.52e-57!112;CL:0000738!2.30e-56!140;CL:0000766!2.03e-50!76;CL:0002087!2.58e-48!119;CL:0002009!1.20e-47!65;CL:0002031!1.53e-46!124;CL:0002194!4.50e-46!63;CL:0000576!4.50e-46!63;CL:0000040!4.50e-46!63;CL:0000559!4.50e-46!63;CL:0000557!7.39e-46!71;CL:0000839!5.42e-43!70;CL:0002057!1.30e-42!42;CL:0000860!2.09e-38!45;CL:0000134!3.51e-14!358;CL:0002320!1.59e-13!365;CL:0000219!2.65e-11!390;CL:0002393!1.46e-09!9;CL:0002397!1.46e-09!9;CL:0000084!2.53e-08!25;CL:0000827!2.53e-08!25;CL:0000094!9.59e-08!8;CL:0000048!2.54e-07!430;CL:0000451!3.78e-07!10;CL:0000791!4.61e-07!18;CL:0000789!4.61e-07!18;CL:0002420!4.61e-07!18;CL:0002419!4.61e-07!18;CL:0000790!4.61e-07!18;CL:0000034!4.74e-07!444;CL:0000838!7.10e-07!52;CL:0000723!9.20e-07!436|ontology_enrichment_celltype_v019=CL:0000860;2.37e-48;33!CL:0002057;2.37e-48;33!CL:0000473;4.92e-44;39!CL:0000234;4.92e-44;39!CL:0000576;1.71e-40;48!CL:0000766;1.65e-31;69!CL:0000763;8.85e-21;100!CL:0002087;6.13e-17;104!CL:0000738;1.44e-16;136!CL:0000988;9.76e-13;177!CL:0000094;2.80e-11;8!CL:0002393;3.37e-10;6!CL:0002397;3.37e-10;6!CL:0000840;5.12e-09;5!CL:0000081;9.65e-08;11!CL:0000451;1.89e-07;10|ontology_enrichment_celltype_v019_2=CL:0000766,4.91e-77,72;CL:0000763,6.33e-75,108;CL:0000049,6.33e-75,108;CL:0000037,8.52e-74,168;CL:0002009,1.52e-73,61;CL:0002194,4.60e-71,59;CL:0000576,4.60e-71,59;CL:0000040,4.60e-71,59;CL:0000559,4.60e-71,59;CL:0000473,8.43e-71,48;CL:0000234,8.43e-71,48;CL:0000557,7.88e-70,67;CL:0000738,3.85e-69,136;CL:0002032,4.98e-69,161;CL:0000837,4.98e-69,161;CL:0000988,1.55e-68,177;CL:0000860,2.67e-66,42;CL:0002057,2.67e-66,42;CL:0000839,7.79e-64,66;CL:0002087,1.08e-59,115;CL:0002031,1.15e-55,120;CL:0000134,1.51e-22,354;CL:0002320,1.50e-21,361;CL:0000219,4.60e-18,386;CL:0000034,3.21e-14,441;CL:0002393,3.95e-14,9;CL:0002397,3.95e-14,9;CL:0000048,7.24e-14,427;CL:0000723,2.70e-13,433;CL:0000094,2.79e-11,8;CL:0000840,5.06e-09,5;CL:0001029,5.06e-09,5;CL:0000081,9.62e-08,11;CL:0000451,1.74e-07,10|ontology_enrichment_development_v019=CL:0002057;2.08e-47;42!CL:0000049;8.51e-21;108|ontology_enrichment_disease=DOID:1240!3.30e-08!39;DOID:8692!3.31e-08!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.53e-50!102;UBERON:0003061!1.53e-50!102;UBERON:0002193!7.94e-46!112;UBERON:0002371!7.52e-39!80;UBERON:0001474!2.38e-38!86;UBERON:0004765!2.14e-31!101;UBERON:0001434!2.14e-31!101;UBERON:0002405!2.34e-31!115;UBERON:0003081!3.67e-13!216;UBERON:0002384!5.61e-13!375;UBERON:0002204!1.67e-12!167;UBERON:0000178!2.59e-07!15;UBERON:0000179!2.59e-07!15;UBERON:0000463!2.59e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;7.97e-10;15!UBERON:0000179;7.97e-10;15!UBERON:0000463;7.97e-10;15!UBERON:0002390;5.03e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.93e-75,98;UBERON:0003061,7.93e-75,98;UBERON:0002193,1.16e-69,108;UBERON:0002405,1.12e-59,93;UBERON:0002371,2.90e-59,76;UBERON:0001474,3.07e-59,82;UBERON:0004765,3.50e-52,90;UBERON:0001434,5.88e-45,100;UBERON:0003081,6.69e-25,203;UBERON:0002384,6.58e-21,371;UBERON:0002204,3.16e-19,167;UBERON:0000178,8.15e-10,15;UBERON:0000179,8.15e-10,15;UBERON:0000463,8.15e-10,15;UBERON:0000926,3.65e-09,315;UBERON:0004120,3.65e-09,315;UBERON:0006603,3.65e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.534893840235659,0.246301768349837,0.314843125254717,25.5686779951788,23.41359328393,28.7957989367901,0,0,0,0,0,0.293600439334847,39.8876694142952,56.3529897391098,44.4872284967496,1.11957737119962,7.12566065241755,1.03030227053675,66.4469951222611,77.0866925125171,78.5972358248524,208.023988030588,164.46715520873,159.498781010978,105.870800374551,106.819014622635,104.052181150978,60.6752398096449,89.7223710181518,67.7132432971709,171.865256002398,115.166395324411,146.070264889305,172.631315297189,128.050681803361,127.228088034009,85.1016354481728,74.5994079504903,79.7040283496138,125.950809564805,160.570018587593,128.924205542084,54.2697116954565,85.0017157024928,73.1926406656243,72.0425408133709,115.639177700095,113.926459478718,48.1662052791227,54.0014921911211,44.6572914932841,33.9232466062415,32.7385626394484,16.5547354297993,18.5258283431812,19.4938343655108,18.2664153764634,0,0,0,0,0,0,0,0,0,4.69789751496751,1.91136614062614,1.32171328579026,30.8279709639845,1.84368859342554,0.393419540227666,2.35806457649499,2.2616164889946,0,0.32592226663359,0,0,1.89397776704795,0.294605907474837,0.443067789167242,0,2.305643755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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4492 | |||
|TSSclassifier=W | |||
|UniProt=Q9HC97,A8K2J1,B2RA17 | |||
|association_with_transcript=227bp_to_ENST00000407714,NM_005301_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_1_at_GPR35_5end | |||
|id=chr2:241564889..241564932,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.42e-65!172;CL:0000566!7.42e-65!172;CL:0002032!7.93e-61!165;CL:0000837!7.93e-61!165;CL:0000988!1.43e-58!182;CL:0000763!5.52e-57!112;CL:0000049!5.52e-57!112;CL:0000738!2.30e-56!140;CL:0000766!2.03e-50!76;CL:0002087!2.58e-48!119;CL:0002009!1.20e-47!65;CL:0002031!1.53e-46!124;CL:0002194!4.50e-46!63;CL:0000576!4.50e-46!63;CL:0000040!4.50e-46!63;CL:0000559!4.50e-46!63;CL:0000557!7.39e-46!71;CL:0000839!5.42e-43!70;CL:0002057!1.30e-42!42;CL:0000860!2.09e-38!45;CL:0000134!3.51e-14!358;CL:0002320!1.59e-13!365;CL:0000219!2.65e-11!390;CL:0002393!1.46e-09!9;CL:0002397!1.46e-09!9;CL:0000084!2.53e-08!25;CL:0000827!2.53e-08!25;CL:0000094!9.59e-08!8;CL:0000048!2.54e-07!430;CL:0000451!3.78e-07!10;CL:0000791!4.61e-07!18;CL:0000789!4.61e-07!18;CL:0002420!4.61e-07!18;CL:0002419!4.61e-07!18;CL:0000790!4.61e-07!18;CL:0000034!4.74e-07!444;CL:0000838!7.10e-07!52;CL:0000723!9.20e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.37e-48;33!CL:0002057;2.37e-48;33!CL:0000473;4.92e-44;39!CL:0000234;4.92e-44;39!CL:0000576;1.71e-40;48!CL:0000766;1.65e-31;69!CL:0000763;8.85e-21;100!CL:0002087;6.13e-17;104!CL:0000738;1.44e-16;136!CL:0000988;9.76e-13;177!CL:0000094;2.80e-11;8!CL:0002393;3.37e-10;6!CL:0002397;3.37e-10;6!CL:0000840;5.12e-09;5!CL:0000081;9.65e-08;11!CL:0000451;1.89e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.91e-77,72;CL:0000763,6.33e-75,108;CL:0000049,6.33e-75,108;CL:0000037,8.52e-74,168;CL:0002009,1.52e-73,61;CL:0002194,4.60e-71,59;CL:0000576,4.60e-71,59;CL:0000040,4.60e-71,59;CL:0000559,4.60e-71,59;CL:0000473,8.43e-71,48;CL:0000234,8.43e-71,48;CL:0000557,7.88e-70,67;CL:0000738,3.85e-69,136;CL:0002032,4.98e-69,161;CL:0000837,4.98e-69,161;CL:0000988,1.55e-68,177;CL:0000860,2.67e-66,42;CL:0002057,2.67e-66,42;CL:0000839,7.79e-64,66;CL:0002087,1.08e-59,115;CL:0002031,1.15e-55,120;CL:0000134,1.51e-22,354;CL:0002320,1.50e-21,361;CL:0000219,4.60e-18,386;CL:0000034,3.21e-14,441;CL:0002393,3.95e-14,9;CL:0002397,3.95e-14,9;CL:0000048,7.24e-14,427;CL:0000723,2.70e-13,433;CL:0000094,2.79e-11,8;CL:0000840,5.06e-09,5;CL:0001029,5.06e-09,5;CL:0000081,9.62e-08,11;CL:0000451,1.74e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-47;42!CL:0000049;8.51e-21;108 | |||
|ontology_enrichment_disease=DOID:1240!3.30e-08!39;DOID:8692!3.31e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-50!102;UBERON:0003061!1.53e-50!102;UBERON:0002193!7.94e-46!112;UBERON:0002371!7.52e-39!80;UBERON:0001474!2.38e-38!86;UBERON:0004765!2.14e-31!101;UBERON:0001434!2.14e-31!101;UBERON:0002405!2.34e-31!115;UBERON:0003081!3.67e-13!216;UBERON:0002384!5.61e-13!375;UBERON:0002204!1.67e-12!167;UBERON:0000178!2.59e-07!15;UBERON:0000179!2.59e-07!15;UBERON:0000463!2.59e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.97e-10;15!UBERON:0000179;7.97e-10;15!UBERON:0000463;7.97e-10;15!UBERON:0002390;5.03e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.93e-75,98;UBERON:0003061,7.93e-75,98;UBERON:0002193,1.16e-69,108;UBERON:0002405,1.12e-59,93;UBERON:0002371,2.90e-59,76;UBERON:0001474,3.07e-59,82;UBERON:0004765,3.50e-52,90;UBERON:0001434,5.88e-45,100;UBERON:0003081,6.69e-25,203;UBERON:0002384,6.58e-21,371;UBERON:0002204,3.16e-19,167;UBERON:0000178,8.15e-10,15;UBERON:0000179,8.15e-10,15;UBERON:0000463,8.15e-10,15;UBERON:0000926,3.65e-09,315;UBERON:0004120,3.65e-09,315;UBERON:0006603,3.65e-09,315 | |||
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| |||
|short_description=p1@GPR35 | |||
}} |
Revision as of 17:46, 12 September 2013
Short description: | p1@GPR35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GPR35_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 227bp_to_ENST00000407714, NM_005301_5end |
EntrezGene: | GPR35 |
HGNC: | 4492 |
UniProt: | Q9HC97A8K2J1B2RA17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.93e-75 | 98 |
blood island | 7.93e-75 | 98 |
hemolymphoid system | 1.16e-69 | 108 |
immune system | 1.12e-59 | 93 |
bone marrow | 2.90e-59 | 76 |
bone element | 3.07e-59 | 82 |
skeletal element | 3.50e-52 | 90 |
skeletal system | 5.88e-45 | 100 |
lateral plate mesoderm | 6.69e-25 | 203 |
connective tissue | 6.58e-21 | 371 |
musculoskeletal system | 3.16e-19 | 167 |
blood | 8.15e-10 | 15 |
haemolymphatic fluid | 8.15e-10 | 15 |
organism substance | 8.15e-10 | 15 |
mesoderm | 3.65e-09 | 315 |
mesoderm-derived structure | 3.65e-09 | 315 |
presumptive mesoderm | 3.65e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.