FFCP PHASE1:Hg19::chr2:234600297..234600308,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54578|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12538|TSSclassifier=S|UniProt=C9JMY5|association_with_transcript=7bp_to_ENST00000441351_5end|coexpression_cluster_id=C1898|description=CAGE_peak_4_at_UGT1A6_5end|id=chr2:234600297..234600308,+|ontology_enrichment_celltype=CL:0000066!2.95e-25!254;CL:0002076!1.14e-20!43;CL:0000223!9.39e-18!59;CL:0002251!5.65e-12!21;CL:0000076!3.89e-11!62;CL:0000244!2.12e-10!4;CL:0000731!2.12e-10!4;CL:0002368!9.90e-08!13;CL:0002159!3.18e-07!13;CL:0002231!4.56e-07!3|ontology_enrichment_celltype_v019=CL:0000244;3.10e-18;4!CL:0000731;3.10e-18;4!CL:0002076;1.40e-13;42!CL:0002368;5.47e-11;13!CL:0002159;5.75e-07;14!CL:0002251;7.73e-07;20|ontology_enrichment_celltype_v019_2=CL:0000066,4.73e-23,253;CL:0000244,3.25e-18,4;CL:0000731,3.25e-18,4;CL:0002076,3.20e-16,42;CL:0000223,1.33e-14,58;CL:0000076,2.37e-11,63;CL:0002368,5.63e-11,13;CL:0002159,5.80e-07,14;CL:0002251,7.24e-07,20|ontology_enrichment_development_v019=CL:0000223;3.09e-08;58|ontology_enrichment_disease=DOID:1749!6.99e-15!14;DOID:305!2.01e-14!106;DOID:0050687!7.91e-10!143|ontology_enrichment_disease_v019=DOID:1749;1.13e-18;14|ontology_enrichment_disease_v019_2=DOID:1749,9.04e-19,14;DOID:305,4.58e-14,106;DOID:0050687,4.12e-10,143|ontology_enrichment_uberon=UBERON:0004119!3.69e-17!169;UBERON:0000925!3.69e-17!169;UBERON:0006595!3.69e-17!169;UBERON:0000365!1.77e-12!5;UBERON:0001007!1.08e-10!155;UBERON:0001555!1.08e-10!155;UBERON:0007026!1.08e-10!155;UBERON:0005911!1.36e-10!82;UBERON:0005910!2.70e-10!6;UBERON:0000344!2.71e-10!12;UBERON:0001004!1.31e-09!72;UBERON:0000077!2.78e-09!130;UBERON:0000161!1.46e-08!35;UBERON:0000065!1.67e-08!53;UBERON:0004921!6.09e-08!129;UBERON:0004185!6.09e-08!129;UBERON:0003729!2.70e-07!5|ontology_enrichment_uberon_v019=UBERON:0000365;3.87e-22;5!UBERON:0005910;2.11e-18;6!UBERON:0000486;1.71e-12;12!UBERON:0005911;2.29e-10;36!UBERON:0001255;2.28e-09;2!UBERON:0001556;2.28e-09;2!UBERON:0000344;9.13e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.88e-22,5;UBERON:0005910,2.11e-18,6;UBERON:0004119,1.16e-13,160;UBERON:0000925,1.16e-13,160;UBERON:0006595,1.16e-13,160;UBERON:0001255,1.97e-09,2;UBERON:0001556,1.97e-09,2;UBERON:0005911,3.51e-08,82;UBERON:0001004,7.79e-08,74;UBERON:0000065,4.79e-07,54;UBERON:0000344,8.46e-07,20|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,2.74375713521564,0,1.3068766413512,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0,0.141775097242386,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,5.21316822788541,0.920809889358963,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0,0,0,8.59481559877086,5.18913181885787,5.99779748724545,4.95673126192195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,1.34060455107157,0,0.0941438007767792,7.31859133541091,11.7930032967338,15.9634855273203,18.8373188169707,0,0,0,0,0,0,0,0,0,0,8.82144777531714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37063524026827,0,2.95930216910801,0,0,0,0,0,0,0.61221999997337,0,27.6518079333764,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,3.91758739581955,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,2.73930466504926,0,0,0,0,0,0,0,0,0,0,0,6.54601955868523,0,0,7.83939179315021,3.74354588295731,0,0,0.0967563312890851,0,0,0.969890164884194,0,0,0,0,0,3.71547627196126,0.160317640503067,0.213452994739353,0.999048047910651,0.432271251462318,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,5.36695500158826,1.26089131678717,0.157363764404994,0,0,5.75745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3733408034002,0.213574825135389,0,0,0,0,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.71635536432595,0,1.31570429747224,0,0,0.168942440653073,1.28120759293973,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54578 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12538 | |||
|TSSclassifier=S | |||
|UniProt=C9JMY5 | |||
|association_with_transcript=7bp_to_ENST00000441351_5end | |||
|coexpression_cluster_id=C1898 | |||
|description=CAGE_peak_4_at_UGT1A6_5end | |||
|id=chr2:234600297..234600308,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.95e-25!254;CL:0002076!1.14e-20!43;CL:0000223!9.39e-18!59;CL:0002251!5.65e-12!21;CL:0000076!3.89e-11!62;CL:0000244!2.12e-10!4;CL:0000731!2.12e-10!4;CL:0002368!9.90e-08!13;CL:0002159!3.18e-07!13;CL:0002231!4.56e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000244;3.10e-18;4!CL:0000731;3.10e-18;4!CL:0002076;1.40e-13;42!CL:0002368;5.47e-11;13!CL:0002159;5.75e-07;14!CL:0002251;7.73e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.73e-23,253;CL:0000244,3.25e-18,4;CL:0000731,3.25e-18,4;CL:0002076,3.20e-16,42;CL:0000223,1.33e-14,58;CL:0000076,2.37e-11,63;CL:0002368,5.63e-11,13;CL:0002159,5.80e-07,14;CL:0002251,7.24e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;3.09e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!6.99e-15!14;DOID:305!2.01e-14!106;DOID:0050687!7.91e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.13e-18;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.04e-19,14;DOID:305,4.58e-14,106;DOID:0050687,4.12e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.69e-17!169;UBERON:0000925!3.69e-17!169;UBERON:0006595!3.69e-17!169;UBERON:0000365!1.77e-12!5;UBERON:0001007!1.08e-10!155;UBERON:0001555!1.08e-10!155;UBERON:0007026!1.08e-10!155;UBERON:0005911!1.36e-10!82;UBERON:0005910!2.70e-10!6;UBERON:0000344!2.71e-10!12;UBERON:0001004!1.31e-09!72;UBERON:0000077!2.78e-09!130;UBERON:0000161!1.46e-08!35;UBERON:0000065!1.67e-08!53;UBERON:0004921!6.09e-08!129;UBERON:0004185!6.09e-08!129;UBERON:0003729!2.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.87e-22;5!UBERON:0005910;2.11e-18;6!UBERON:0000486;1.71e-12;12!UBERON:0005911;2.29e-10;36!UBERON:0001255;2.28e-09;2!UBERON:0001556;2.28e-09;2!UBERON:0000344;9.13e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.88e-22,5;UBERON:0005910,2.11e-18,6;UBERON:0004119,1.16e-13,160;UBERON:0000925,1.16e-13,160;UBERON:0006595,1.16e-13,160;UBERON:0001255,1.97e-09,2;UBERON:0001556,1.97e-09,2;UBERON:0005911,3.51e-08,82;UBERON:0001004,7.79e-08,74;UBERON:0000065,4.79e-07,54;UBERON:0000344,8.46e-07,20 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,2.74375713521564,0,1.3068766413512,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0,0.141775097242386,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,5.21316822788541,0.920809889358963,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,2.29706215198469,0.650060246036521,0,0,0,0,0,0,0,0,0,8.59481559877086,5.18913181885787,5.99779748724545,4.95673126192195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,1.34060455107157,0,0.0941438007767792,7.31859133541091,11.7930032967338,15.9634855273203,18.8373188169707,0,0,0,0,0,0,0,0,0,0,8.82144777531714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37063524026827,0,2.95930216910801,0,0,0,0,0,0,0.61221999997337,0,27.6518079333764,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,3.91758739581955,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,2.73930466504926,0,0,0,0,0,0,0,0,0,0,0,6.54601955868523,0,0,7.83939179315021,3.74354588295731,0,0,0.0967563312890851,0,0,0.969890164884194,0,0,0,0,0,3.71547627196126,0.160317640503067,0.213452994739353,0.999048047910651,0.432271251462318,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,5.36695500158826,1.26089131678717,0.157363764404994,0,0,5.75745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3733408034002,0.213574825135389,0,0,0,0,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.71635536432595,0,1.31570429747224,0,0,0.168942440653073,1.28120759293973,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86480665151949,28.5486730501532,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.9136733897211,0,0,0,0,0,0,6.5165443586219,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34896406775364,0,7.92466512384751,0,0,0,0.485710993059139,0,0,0,1.6941912305844,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,12.498775702396,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,1.27940389140589,0,0,0.0620747142958579,0,0,0,0.435433495793923,0.342233301085281,0.606168477131288,1.43444410785353,0,5.53542226554627,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@UGT1A6 | |||
}} |
Revision as of 17:29, 12 September 2013
Short description: | p4@UGT1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_UGT1A6_5end |
Coexpression cluster: | C1898_oral_lung_pharyngeal_bronchial_pleomorphic_squamous_Urothelial |
Association with transcript: | 7bp_to_ENST00000441351_5end |
EntrezGene: | UGT1A6 |
HGNC: | 12538 |
UniProt: | C9JMY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.73e-23 | 253 |
transitional epithelial cell | 3.25e-18 | 4 |
urothelial cell | 3.25e-18 | 4 |
endo-epithelial cell | 3.20e-16 | 42 |
endodermal cell | 1.33e-14 | 58 |
squamous epithelial cell | 2.37e-11 | 63 |
respiratory epithelial cell | 5.63e-11 | 13 |
general ecto-epithelial cell | 5.80e-07 | 14 |
epithelial cell of alimentary canal | 7.24e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.88e-22 | 5 |
transitional epithelium | 2.11e-18 | 6 |
endoderm-derived structure | 1.16e-13 | 160 |
endoderm | 1.16e-13 | 160 |
presumptive endoderm | 1.16e-13 | 160 |
urinary bladder | 1.97e-09 | 2 |
lower urinary tract | 1.97e-09 | 2 |
endo-epithelium | 3.51e-08 | 82 |
respiratory system | 7.79e-08 | 74 |
respiratory tract | 4.79e-07 | 54 |
mucosa | 8.46e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.04e-19 | 14 |
carcinoma | 4.58e-14 | 106 |
cell type cancer | 4.12e-10 | 143 |
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