FFCP PHASE1:Hg19::chr2:233352573..233352580,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9427|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3147|TSSclassifier=S|UniProt=O95672|association_with_transcript=-35bp_to_ENST00000304546_5end|coexpression_cluster_id=C2693|description=CAGE_peak_4_at_ECEL1_5end|id=chr2:233352573..233352580,-|ontology_enrichment_celltype=CL:0002322!4.66e-22!5;CL:0002563!3.29e-11!4;CL:0002253!2.32e-10!2|ontology_enrichment_celltype_v019=CL:0002553;1.88e-50;1!CL:0000082;3.33e-24;19|ontology_enrichment_celltype_v019_2=CL:0002553,2.42e-50,1;CL:0000082,3.46e-24,19|ontology_enrichment_development_v019=UBERON:0008947;3.22e-16;29!UBERON:0001041;1.03e-15;30|ontology_enrichment_disease=DOID:5409!5.68e-11!4;DOID:1325!6.52e-11!7;DOID:3904!6.52e-11!7;DOID:1324!1.15e-07!15;DOID:0050615!3.65e-07!16|ontology_enrichment_disease_v019=DOID:1324;2.33e-30;15!DOID:1325;4.86e-29;7!DOID:3904;4.86e-29;7!DOID:0050615;1.56e-28;16!DOID:5409;1.21e-13;4!DOID:3905;8.61e-07;9|ontology_enrichment_disease_v019_2=DOID:1324,2.45e-30,15;DOID:1325,4.86e-29,7;DOID:3904,4.86e-29,7;DOID:0050615,1.64e-28,16;DOID:5409,1.29e-13,4;DOID:305,2.62e-08,106;DOID:3905,8.85e-07,9|ontology_enrichment_uberon=UBERON:0001242!3.29e-11!4;UBERON:0001262!3.29e-11!4;UBERON:0004786!3.29e-11!4;UBERON:0004808!3.29e-11!4;UBERON:0001277!3.29e-11!4;UBERON:0003350!4.72e-09!5|ontology_enrichment_uberon_v019=UBERON:0004802;3.33e-24;19!UBERON:0000115;3.33e-24;19!UBERON:0002048;4.74e-21;22!UBERON:0004807;4.74e-21;22!UBERON:0000117;4.74e-21;22!UBERON:0000171;4.74e-21;22!UBERON:0000170;4.74e-21;22!UBERON:0005911;4.28e-14;36!UBERON:0005178;2.72e-13;34!UBERON:0002224;2.72e-13;34!UBERON:0000072;8.28e-13;37!UBERON:0005181;1.72e-12;35!UBERON:0000065;1.39e-09;44|ontology_enrichment_uberon_v019_2=UBERON:0004802,3.46e-24,19;UBERON:0000115,3.46e-24,19;UBERON:0002048,4.90e-21,22;UBERON:0000117,4.90e-21,22;UBERON:0000171,4.90e-21,22;UBERON:0000170,4.90e-21,22;UBERON:0005597,4.90e-21,22;UBERON:0000118,4.90e-21,22;UBERON:0004807,9.46e-17,28;UBERON:0005178,5.72e-14,34;UBERON:0002224,5.72e-14,34;UBERON:0005181,1.35e-13,35;UBERON:0005153,6.49e-13,37;UBERON:0008947,1.34e-12,38;UBERON:0003258,1.34e-12,38;UBERON:0000072,2.31e-10,47;UBERON:0005157,2.31e-10,47;UBERON:0000915,1.89e-09,52;UBERON:0000065,3.93e-09,54;UBERON:0001004,6.92e-07,74|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43363357068786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65471377237555,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0.282706142867882,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.264768380074501,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0.572682980829578,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.968440444553616,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0.11294608203896,1.53916723443601,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.0918948995348449,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@ECEL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9427 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3147 | |||
|TSSclassifier=S | |||
|UniProt=O95672 | |||
|association_with_transcript=-35bp_to_ENST00000304546_5end | |||
|coexpression_cluster_id=C2693 | |||
|description=CAGE_peak_4_at_ECEL1_5end | |||
|id=chr2:233352573..233352580,- | |||
|ontology_enrichment_celltype=CL:0002322!4.66e-22!5;CL:0002563!3.29e-11!4;CL:0002253!2.32e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.88e-50;1!CL:0000082;3.33e-24;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.42e-50,1;CL:0000082,3.46e-24,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.22e-16;29!UBERON:0001041;1.03e-15;30 | |||
|ontology_enrichment_disease=DOID:5409!5.68e-11!4;DOID:1325!6.52e-11!7;DOID:3904!6.52e-11!7;DOID:1324!1.15e-07!15;DOID:0050615!3.65e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:1324;2.33e-30;15!DOID:1325;4.86e-29;7!DOID:3904;4.86e-29;7!DOID:0050615;1.56e-28;16!DOID:5409;1.21e-13;4!DOID:3905;8.61e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,2.45e-30,15;DOID:1325,4.86e-29,7;DOID:3904,4.86e-29,7;DOID:0050615,1.64e-28,16;DOID:5409,1.29e-13,4;DOID:305,2.62e-08,106;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001242!3.29e-11!4;UBERON:0001262!3.29e-11!4;UBERON:0004786!3.29e-11!4;UBERON:0004808!3.29e-11!4;UBERON:0001277!3.29e-11!4;UBERON:0003350!4.72e-09!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;3.33e-24;19!UBERON:0000115;3.33e-24;19!UBERON:0002048;4.74e-21;22!UBERON:0004807;4.74e-21;22!UBERON:0000117;4.74e-21;22!UBERON:0000171;4.74e-21;22!UBERON:0000170;4.74e-21;22!UBERON:0005911;4.28e-14;36!UBERON:0005178;2.72e-13;34!UBERON:0002224;2.72e-13;34!UBERON:0000072;8.28e-13;37!UBERON:0005181;1.72e-12;35!UBERON:0000065;1.39e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,3.46e-24,19;UBERON:0000115,3.46e-24,19;UBERON:0002048,4.90e-21,22;UBERON:0000117,4.90e-21,22;UBERON:0000171,4.90e-21,22;UBERON:0000170,4.90e-21,22;UBERON:0005597,4.90e-21,22;UBERON:0000118,4.90e-21,22;UBERON:0004807,9.46e-17,28;UBERON:0005178,5.72e-14,34;UBERON:0002224,5.72e-14,34;UBERON:0005181,1.35e-13,35;UBERON:0005153,6.49e-13,37;UBERON:0008947,1.34e-12,38;UBERON:0003258,1.34e-12,38;UBERON:0000072,2.31e-10,47;UBERON:0005157,2.31e-10,47;UBERON:0000915,1.89e-09,52;UBERON:0000065,3.93e-09,54;UBERON:0001004,6.92e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43363357068786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65471377237555,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0.282706142867882,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.264768380074501,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0.572682980829578,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.968440444553616,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0.11294608203896,1.53916723443601,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.0918948995348449,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ECEL1 | |||
}} |
Revision as of 17:25, 12 September 2013
Short description: | p4@ECEL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ECEL1_5end |
Coexpression cluster: | C2693_anaplastic_nonsmall_bronchogenic_ovary_small_medulloblastoma_glassy |
Association with transcript: | -35bp_to_ENST00000304546_5end |
EntrezGene: | ECEL1 |
HGNC: | 3147 |
UniProt: | O95672 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.42e-50 | 1 |
epithelial cell of lung | 3.46e-24 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 3.46e-24 | 19 |
lung epithelium | 3.46e-24 | 19 |
lung | 4.90e-21 | 22 |
respiratory tube | 4.90e-21 | 22 |
respiration organ | 4.90e-21 | 22 |
pair of lungs | 4.90e-21 | 22 |
lung primordium | 4.90e-21 | 22 |
lung bud | 4.90e-21 | 22 |
respiratory system epithelium | 9.46e-17 | 28 |
thoracic cavity element | 5.72e-14 | 34 |
thoracic cavity | 5.72e-14 | 34 |
thoracic segment organ | 1.35e-13 | 35 |
epithelial bud | 6.49e-13 | 37 |
respiratory primordium | 1.34e-12 | 38 |
endoderm of foregut | 1.34e-12 | 38 |
segment of respiratory tract | 2.31e-10 | 47 |
epithelial fold | 2.31e-10 | 47 |
thoracic segment of trunk | 1.89e-09 | 52 |
respiratory tract | 3.93e-09 | 54 |
respiratory system | 6.92e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 2.45e-30 | 15 |
bronchus cancer | 4.86e-29 | 7 |
bronchogenic carcinoma | 4.86e-29 | 7 |
respiratory system cancer | 1.64e-28 | 16 |
lung small cell carcinoma | 1.29e-13 | 4 |
carcinoma | 2.62e-08 | 106 |
lung carcinoma | 8.85e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.