FFCP PHASE1:Hg19::chr2:220491902..220491915,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6508|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11029|TSSclassifier=W|UniProt=P48751|association_with_transcript=-133bp_to_ENST00000358055_5end|coexpression_cluster_id=C56|description=CAGE_peak_11_at_SLC4A3_5end|id=chr2:220491902..220491915,+|ontology_enrichment_celltype=CL:0002605!3.37e-07!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;1.81e-63;4!UBERON:0007284;1.81e-63;4!UBERON:0004140;7.48e-30;1!UBERON:0010226;2.37e-29;1!UBERON:0003104;1.00e-08;31!UBERON:0006603;1.41e-07;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;3.58e-57;2!DOID:178;2.37e-29;1!DOID:326;2.37e-29;1!DOID:3978;2.37e-29;1!DOID:3394;2.37e-29;1!DOID:5844;2.37e-29;1!DOID:1287;3.16e-29;4|ontology_enrichment_disease_v019_2=DOID:114,3.58e-57,2;DOID:178,2.37e-29,1;DOID:326,2.37e-29,1;DOID:3978,2.37e-29,1;DOID:3394,2.37e-29,1;DOID:5844,2.37e-29,1;DOID:1287,3.16e-29,4|ontology_enrichment_uberon=UBERON:0001049!2.73e-36!57;UBERON:0005068!2.73e-36!57;UBERON:0006241!2.73e-36!57;UBERON:0007135!2.73e-36!57;UBERON:0002616!4.00e-30!59;UBERON:0003075!2.80e-29!86;UBERON:0007284!2.80e-29!86;UBERON:0001017!2.17e-28!82;UBERON:0002780!5.47e-28!41;UBERON:0001890!5.47e-28!41;UBERON:0006240!5.47e-28!41;UBERON:0007023!1.10e-27!115;UBERON:0002346!1.77e-27!90;UBERON:0000955!2.28e-27!69;UBERON:0006238!2.28e-27!69;UBERON:0003080!3.71e-27!42;UBERON:0005743!1.38e-26!86;UBERON:0000073!1.27e-24!94;UBERON:0001016!1.27e-24!94;UBERON:0001893!9.65e-24!34;UBERON:0002791!2.07e-22!33;UBERON:0002020!1.36e-21!34;UBERON:0003528!1.36e-21!34;UBERON:0001869!8.46e-21!32;UBERON:0003056!5.53e-18!61;UBERON:0000956!1.84e-17!25;UBERON:0000203!1.84e-17!25;UBERON:0000153!4.89e-16!129;UBERON:0007811!4.89e-16!129;UBERON:0000033!2.68e-15!123;UBERON:0004121!3.93e-15!169;UBERON:0000924!1.65e-14!173;UBERON:0006601!1.65e-14!173;UBERON:0002619!5.26e-13!22;UBERON:0001950!2.39e-12!20;UBERON:0000200!4.91e-12!6;UBERON:0003076!4.09e-10!15;UBERON:0003057!4.09e-10!15;UBERON:0000025!4.59e-10!194;UBERON:0002298!6.05e-09!8;UBERON:0003978!1.65e-08!3;UBERON:0009751!1.65e-08!3;UBERON:0000946!1.65e-08!3;UBERON:0002523!1.65e-08!3;UBERON:0005983!1.65e-08!3;UBERON:0002165!1.65e-08!3;UBERON:0002062!1.65e-08!3;UBERON:0007280!1.65e-08!3;UBERON:0004111!3.14e-08!241;UBERON:0000064!6.43e-08!219;UBERON:0004733!9.15e-08!12;UBERON:0002028!9.15e-08!12;UBERON:0007277!9.15e-08!12;UBERON:0001896!2.96e-07!3;UBERON:0005290!2.96e-07!3;UBERON:0010096!2.96e-07!3;UBERON:0004732!4.39e-07!13;UBERON:0002771!6.95e-07!3|ontology_enrichment_uberon_v019=UBERON:0003978;3.02e-84;3!UBERON:0000946;3.02e-84;3!UBERON:0002133;8.46e-57;2!UBERON:0007100;3.42e-55;25!UBERON:0004151;2.64e-38;3!UBERON:0000948;2.63e-32;22!UBERON:0002084;2.37e-29;1!UBERON:0002135;2.37e-29;1!UBERON:0002146;2.37e-29;1!UBERON:0002134;2.37e-29;1!UBERON:0002082;2.37e-29;1!UBERON:0005208;2.37e-29;1!UBERON:0005623;2.37e-29;1!UBERON:0004145;2.37e-29;1!UBERON:0005946;2.37e-29;1!UBERON:0005965;2.37e-29;1!UBERON:0002078;2.37e-29;1!UBERON:0010313;5.53e-26;10!UBERON:0002081;2.05e-15;2!UBERON:0003103;1.04e-11;61!UBERON:0001009;9.29e-07;112|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.71e-84,3;UBERON:0009751,1.71e-84,3;UBERON:0000946,1.71e-84,3;UBERON:0002523,1.71e-84,3;UBERON:0005983,1.71e-84,3;UBERON:0002165,1.71e-84,3;UBERON:0002062,1.71e-84,3;UBERON:0007280,1.71e-84,3;UBERON:0002133,6.36e-57,2;UBERON:0007100,3.82e-51,27;UBERON:0004151,4.67e-38,3;UBERON:0004797,8.05e-37,7;UBERON:0000948,1.16e-29,24;UBERON:0005498,1.16e-29,24;UBERON:0004140,1.16e-29,24;UBERON:0009881,1.16e-29,24;UBERON:0004141,1.16e-29,24;UBERON:0003084,1.16e-29,24;UBERON:0007005,1.16e-29,24;UBERON:0004139,1.16e-29,24;UBERON:0004291,1.16e-29,24;UBERON:0002135,1.33e-29,1;UBERON:0002146,1.78e-29,1;UBERON:0005623,1.78e-29,1;UBERON:0002134,3.16e-29,1;UBERON:0005208,3.16e-29,1;UBERON:0005946,3.16e-29,1;UBERON:0005965,3.16e-29,1;UBERON:0002078,3.16e-29,1;UBERON:0002084,4.20e-29,1;UBERON:0002082,4.20e-29,1;UBERON:0010226,4.20e-29,1;UBERON:0010313,4.66e-26,10;UBERON:0002342,4.66e-26,10;UBERON:0005062,4.66e-26,10;UBERON:0003103,1.45e-20,68;UBERON:0002081,2.37e-15,2;UBERON:0010227,2.37e-15,2;UBERON:0001009,1.36e-12,112;UBERON:0004145,1.09e-10,3;UBERON:0007023,3.77e-09,114;UBERON:0004872,7.51e-09,83;UBERON:0004535,8.55e-07,109|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6508 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11029 | |||
|TSSclassifier=W | |||
|UniProt=P48751 | |||
|association_with_transcript=-133bp_to_ENST00000358055_5end | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_11_at_SLC4A3_5end | |||
|id=chr2:220491902..220491915,+ | |||
|ontology_enrichment_celltype=CL:0002605!3.37e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.81e-63;4!UBERON:0007284;1.81e-63;4!UBERON:0004140;7.48e-30;1!UBERON:0010226;2.37e-29;1!UBERON:0003104;1.00e-08;31!UBERON:0006603;1.41e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.58e-57;2!DOID:178;2.37e-29;1!DOID:326;2.37e-29;1!DOID:3978;2.37e-29;1!DOID:3394;2.37e-29;1!DOID:5844;2.37e-29;1!DOID:1287;3.16e-29;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.58e-57,2;DOID:178,2.37e-29,1;DOID:326,2.37e-29,1;DOID:3978,2.37e-29,1;DOID:3394,2.37e-29,1;DOID:5844,2.37e-29,1;DOID:1287,3.16e-29,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.73e-36!57;UBERON:0005068!2.73e-36!57;UBERON:0006241!2.73e-36!57;UBERON:0007135!2.73e-36!57;UBERON:0002616!4.00e-30!59;UBERON:0003075!2.80e-29!86;UBERON:0007284!2.80e-29!86;UBERON:0001017!2.17e-28!82;UBERON:0002780!5.47e-28!41;UBERON:0001890!5.47e-28!41;UBERON:0006240!5.47e-28!41;UBERON:0007023!1.10e-27!115;UBERON:0002346!1.77e-27!90;UBERON:0000955!2.28e-27!69;UBERON:0006238!2.28e-27!69;UBERON:0003080!3.71e-27!42;UBERON:0005743!1.38e-26!86;UBERON:0000073!1.27e-24!94;UBERON:0001016!1.27e-24!94;UBERON:0001893!9.65e-24!34;UBERON:0002791!2.07e-22!33;UBERON:0002020!1.36e-21!34;UBERON:0003528!1.36e-21!34;UBERON:0001869!8.46e-21!32;UBERON:0003056!5.53e-18!61;UBERON:0000956!1.84e-17!25;UBERON:0000203!1.84e-17!25;UBERON:0000153!4.89e-16!129;UBERON:0007811!4.89e-16!129;UBERON:0000033!2.68e-15!123;UBERON:0004121!3.93e-15!169;UBERON:0000924!1.65e-14!173;UBERON:0006601!1.65e-14!173;UBERON:0002619!5.26e-13!22;UBERON:0001950!2.39e-12!20;UBERON:0000200!4.91e-12!6;UBERON:0003076!4.09e-10!15;UBERON:0003057!4.09e-10!15;UBERON:0000025!4.59e-10!194;UBERON:0002298!6.05e-09!8;UBERON:0003978!1.65e-08!3;UBERON:0009751!1.65e-08!3;UBERON:0000946!1.65e-08!3;UBERON:0002523!1.65e-08!3;UBERON:0005983!1.65e-08!3;UBERON:0002165!1.65e-08!3;UBERON:0002062!1.65e-08!3;UBERON:0007280!1.65e-08!3;UBERON:0004111!3.14e-08!241;UBERON:0000064!6.43e-08!219;UBERON:0004733!9.15e-08!12;UBERON:0002028!9.15e-08!12;UBERON:0007277!9.15e-08!12;UBERON:0001896!2.96e-07!3;UBERON:0005290!2.96e-07!3;UBERON:0010096!2.96e-07!3;UBERON:0004732!4.39e-07!13;UBERON:0002771!6.95e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.02e-84;3!UBERON:0000946;3.02e-84;3!UBERON:0002133;8.46e-57;2!UBERON:0007100;3.42e-55;25!UBERON:0004151;2.64e-38;3!UBERON:0000948;2.63e-32;22!UBERON:0002084;2.37e-29;1!UBERON:0002135;2.37e-29;1!UBERON:0002146;2.37e-29;1!UBERON:0002134;2.37e-29;1!UBERON:0002082;2.37e-29;1!UBERON:0005208;2.37e-29;1!UBERON:0005623;2.37e-29;1!UBERON:0004145;2.37e-29;1!UBERON:0005946;2.37e-29;1!UBERON:0005965;2.37e-29;1!UBERON:0002078;2.37e-29;1!UBERON:0010313;5.53e-26;10!UBERON:0002081;2.05e-15;2!UBERON:0003103;1.04e-11;61!UBERON:0001009;9.29e-07;112 | |||
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|short_description=p11@SLC4A3 | |||
}} |
Revision as of 17:01, 12 September 2013
Short description: | p11@SLC4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SLC4A3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -133bp_to_ENST00000358055_5end |
EntrezGene: | SLC4A3 |
HGNC: | 11029 |
UniProt: | P48751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.58e-57 | 2 |
vascular disease | 2.37e-29 | 1 |
ischemia | 2.37e-29 | 1 |
extrinsic cardiomyopathy | 2.37e-29 | 1 |
myocardial ischemia | 2.37e-29 | 1 |
myocardial infarction | 2.37e-29 | 1 |
cardiovascular system disease | 3.16e-29 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.