FFCP PHASE1:Hg19::chr2:220115944..220115958,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7277|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=12407|TSSclassifier=N|UniProt=|association_with_transcript=-214bp_to_BC018854_5end|coexpression_cluster_id=C4188|description=CAGE_peak_7_at_TUBA4A_5end|id=chr2:220115944..220115958,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000775;2.32e-15;3!CL:0002202;9.78e-09;9!CL:0002632;9.78e-09;9!CL:0002328;2.29e-07;3!CL:0000307;2.29e-07;3|ontology_enrichment_celltype_v019_2=CL:0000775,2.83e-15,3;CL:0002202,1.00e-08,9;CL:0002632,1.00e-08,9;CL:0002328,1.84e-07,3;CL:0000068,2.94e-07,3;CL:0000069,2.94e-07,3;CL:0000307,2.94e-07,3;CL:0000377,2.94e-07,3|ontology_enrichment_development_v019=CL:0000377;2.29e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.37e-08!115|ontology_enrichment_uberon_v019=UBERON:0004815;2.29e-07;3!UBERON:0002031;2.29e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.84e-07,3;UBERON:0002031,1.84e-07,3|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,1.52826811495903,0.738905305049512,1.57421562627358,0,0,0,2.75826367343678,2.409647350226,0.739508020333575,0.309868802321207,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.581592955118259,0.377875943688809,0.727752183563449,0,0.411167888021826,0.619412741790207,0,0.512321413058201,0,0.689491361473237,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.48217676009124,0,0.19891667719909,0,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0.393010762749165,1.02800749499755,0.668745981562712,0,0.473447805734733,0,1.33692548262208,0.294605907474837,0,0,1.5370958367081,0.910415432919148,0.493313713811028,0,0.579606171470105,0,0.535081656179426,0,0.453237370790265,0.766440987203842,0,0,0.318565414324097,0,0,0.451725357233318,0.383959833463255,0,0,0.821127996921047,0.403213486449465,3.4767225451856,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.196468613246569,0,0.370784442784429,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,1.3082821564276,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0.368502951935304,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0.919463387397059,0.150238058906597,0,0,0,0.423863802319124,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.818238361772504,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,1.18306800039844,1.68584690078102,0.723033089650446,1.32352767278873,0.653638332277218,0.237270619111097,0.674156540800822,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.548751427043128,0,1.40740561376283,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0.239624855491583,0,0,0,0.410952645100767,0,0.224170287987055,0,1.94064817373566,0.256686072559497,0,0,0,0.167516265334349,0,2.24702107184155,8.97484377612075,2.07207756718018,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0.606255142892519,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41114234667227,0.736647911487171,0,0.182091168006717,0,0,0.308061348417659,0,0,0.316654886678627,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.732555718546747,0.165018999841176,0.574265537996172,3.90036147621913,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.4046311234222,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0,0.54907405947211,0.353437207037059,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,2.01090682660736,2.17781969722645,0.0941438007767792,2.58303223602738,3.36942951335251,0.443430153536676,0.229723400206959,0.507447609232169,0.764637207142375,2.27858874869665,0,0.822724546172388,0,0.540031437238115,5.55187623405989,0,0,0.735120647943095,0.371606350251437,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,1.09675927041116,0,0.677167111206413,0.1605880751037,0.201799707191048,0,2.06103206853459,0,0,0,0.586164286206121,0.278406173895242,0,0.270455678475983,0.66614393599564,0,0.18714054040822,0,0,0,0,0.71623345421307,0,0.614321404198464,0,0,0,0.494411622680279,0.211125408127993,0.19924798825107,0,0.251932747854276,0.2045373650043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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7277 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12407 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-214bp_to_BC018854_5end | |||
|coexpression_cluster_id=C4188 | |||
|description=CAGE_peak_7_at_TUBA4A_5end | |||
|id=chr2:220115944..220115958,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.32e-15;3!CL:0002202;9.78e-09;9!CL:0002632;9.78e-09;9!CL:0002328;2.29e-07;3!CL:0000307;2.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.83e-15,3;CL:0002202,1.00e-08,9;CL:0002632,1.00e-08,9;CL:0002328,1.84e-07,3;CL:0000068,2.94e-07,3;CL:0000069,2.94e-07,3;CL:0000307,2.94e-07,3;CL:0000377,2.94e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.29e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.29e-07;3!UBERON:0002031;2.29e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.84e-07,3;UBERON:0002031,1.84e-07,3 | |||
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| |||
|short_description=p7@TUBA4A | |||
}} |
Revision as of 16:56, 12 September 2013
Short description: | p7@TUBA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TUBA4A_5end |
Coexpression cluster: | C4188_Neutrophils_Bronchial_Alveolar_medial_Prostate_Sebocyte_Urothelial |
Association with transcript: | -214bp_to_BC018854_5end |
EntrezGene: | TUBA4A |
HGNC: | 12407 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.83e-15 | 3 |
epithelial cell of tracheobronchial tree | 1.00e-08 | 9 |
epithelial cell of lower respiratory tract | 1.00e-08 | 9 |
bronchial epithelial cell | 1.84e-07 | 3 |
duct epithelial cell | 2.94e-07 | 3 |
branched duct epithelial cell | 2.94e-07 | 3 |
tracheal epithelial cell | 2.94e-07 | 3 |
tracheoblast | 2.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.84e-07 | 3 |
epithelium of bronchus | 1.84e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.