FFCP PHASE1:Hg19::chr2:219264492..219264504,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=58190|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21614|TSSclassifier=S|UniProt=Q9GZU7|association_with_transcript=14bp_to_ENST00000273062,NM_021198,NM_182642,uc002vhx.2,uc002vhy.2_5end|description=CAGE_peak_7_at_CTDSP1_5end|id=chr2:219264492..219264504,+|ontology_enrichment_celltype=CL:0002057!1.97e-11!42;CL:0000860!1.71e-10!45;CL:0000766!4.55e-08!76;CL:0002194!5.01e-08!63;CL:0000576!5.01e-08!63;CL:0000040!5.01e-08!63;CL:0000559!5.01e-08!63;CL:0000003!8.57e-08!722;CL:0000839!2.70e-07!70;CL:0000063!4.81e-07!578;CL:0002009!5.44e-07!65;CL:0002371!9.85e-07!591|ontology_enrichment_celltype_v019=CL:0000860;2.21e-11;33!CL:0002057;2.21e-11;33!CL:0000473;9.97e-09;39!CL:0000234;9.97e-09;39!CL:0000576;5.94e-07;48|ontology_enrichment_celltype_v019_2=CL:0000860,3.39e-13,42;CL:0002057,3.39e-13,42;CL:0000473,1.97e-12,48;CL:0000234,1.97e-12,48;CL:0000766,6.96e-10,72;CL:0002194,1.70e-09,59;CL:0000576,1.70e-09,59;CL:0000040,1.70e-09,59;CL:0000559,1.70e-09,59;CL:0002009,1.15e-08,61;CL:0000839,2.84e-08,66;CL:0000557,1.32e-07,67|ontology_enrichment_development_v019=CL:0002057;2.47e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!8.91e-07!448;UBERON:0004120!8.91e-07!448;UBERON:0006603!8.91e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.23e-07,203;UBERON:0002371,2.33e-07,76;UBERON:0002390,2.86e-07,98;UBERON:0003061,2.86e-07,98|phase1_expression=2.54349730978779,2.5692062866918,2.39622486963151,0,1.78784437770915,0.872338524100369,0,3.15859936713415,0.783556884599516,1.22866968250754,4.18680700783456,2.62129646556207,2.63766978228454,0.618831764800233,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,0,0.61560529038394,2.04000691244253,0.626909442956176,0.572471974262113,0.547497700291537,0.502170558379211,0.458480434487708,1.06730766284929,0.787107813136792,0,1.15148819429164,1.54816123316076,5.51652734687356,3.31326510656075,2.58827807116751,0.774672005803016,0.853015394924529,0,1.10799081706375,0.802177789880567,0.217010870715852,0.223915474239924,0,1.80302897343931,8.28769961043519,6.04601509902095,9.21819432513701,5.34586784883075,4.52284676824008,3.09706370895104,2.8769239232215,2.0492856522328,1.18241114944293,1.03423704220986,1.93645405075148,0,10.9180556934711,6.5497476013883,4.04502272001152,6.12167784741805,6.09765151444578,1.27867425159808,1.9791078011203,2.39356389145958,3.83602275479425,4.06292934080018,1.70215567407342,1.86846674698672,1.7587406567972,1.5644487552606,1.08594422352558,3.02699751316684,1.84138817993782,1.58231193720442,2.95757400836718,4.03948169933583,2.51590374610051,2.3589012540764,2.25265339262259,1.92870704036496,1.71007646244749,2.78483348078726,1.27864907635244,0,0,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0,1.32171328579026,0,0.263384084775077,0,0,0,1.5046784585161,0.651844533267181,0.473447805734733,0,1.78256731016278,2.06224135232386,1.77227115666897,1.08321545506006,3.5865569523189,1.56071217071854,0.986627427622057,2.48715016007264,1.44901542867526,0.296573126324121,0.802622484269139,2.09071047609954,2.15287751125376,0.766440987203842,2.06176467289578,0.253019692019503,0.318565414324097,1.95325036156926,0,1.20460095262218,0.895906278080929,0,0.473554504088034,2.46338399076314,0.403213486449465,0.267440195783507,0.434473211648397,0,2.01210257911091,2.04580098949649,1.44575660953827,4.51204119572301,2.60723734129483,2.3858578411533,4.37971383272372,0,0.443458794925128,0.351339142772504,0.392937226493138,1.09288586487763,2.22470665670658,0.324547393654683,0.870648686496336,1.99436940778298,0.953962497221368,0,0,0,0,0.347140501607594,1.69592382577203,1.25849830862972,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,1.67360306382335,0.402829317109147,1.52054421143703,1.46437234528902,0.367663080345869,1.62028389576352,0.357198913136319,0.44905874525234,0.450445921933289,0,0,0.916008719652036,5.27121669744253,0,1.3082821564276,3.97577561356255,1.64619665163954,0.529636723252875,1.14734648299525,3.54668382198357,2.24271040056923,2.1349799145941,2.4666754841716,0.933633106199299,0.942974704487816,0.980771418680752,1.21085942115945,2.30470369792,0,0.312160076830321,1.1409436430889,0.448346041655403,0.23486899728753,0.971237666208789,0.842704840213491,1.63323337003915,1.22834317311768,0.516628905878827,4.75201142912821,1.97813543422845,0.910161361938026,5.03032699271367,0.673344455816265,0.500474079487857,1.93944880838928,2.63386572528503,2.75839016219118,2.10333282469236,1.58805056424029,0.89694817844431,2.56268866582281,2.7551147150743,1.50045548042201,1.23663035086127,2.57640540045629,3.16398655763703,1.5189869901714,1.94874010322397,1.51460264546469,2.11714766877288,2.26304479546337,1.06502877754984,1.71278566986988,1.18692414617341,3.28543450377605,1.90922284413584,1.72082757233402,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=58190 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21614 | |||
|TSSclassifier=S | |||
|UniProt=Q9GZU7 | |||
|association_with_transcript=14bp_to_ENST00000273062,NM_021198,NM_182642,uc002vhx.2,uc002vhy.2_5end | |||
|description=CAGE_peak_7_at_CTDSP1_5end | |||
|id=chr2:219264492..219264504,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.97e-11!42;CL:0000860!1.71e-10!45;CL:0000766!4.55e-08!76;CL:0002194!5.01e-08!63;CL:0000576!5.01e-08!63;CL:0000040!5.01e-08!63;CL:0000559!5.01e-08!63;CL:0000003!8.57e-08!722;CL:0000839!2.70e-07!70;CL:0000063!4.81e-07!578;CL:0002009!5.44e-07!65;CL:0002371!9.85e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-11;33!CL:0002057;2.21e-11;33!CL:0000473;9.97e-09;39!CL:0000234;9.97e-09;39!CL:0000576;5.94e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.39e-13,42;CL:0002057,3.39e-13,42;CL:0000473,1.97e-12,48;CL:0000234,1.97e-12,48;CL:0000766,6.96e-10,72;CL:0002194,1.70e-09,59;CL:0000576,1.70e-09,59;CL:0000040,1.70e-09,59;CL:0000559,1.70e-09,59;CL:0002009,1.15e-08,61;CL:0000839,2.84e-08,66;CL:0000557,1.32e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.47e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.91e-07!448;UBERON:0004120!8.91e-07!448;UBERON:0006603!8.91e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.23e-07,203;UBERON:0002371,2.33e-07,76;UBERON:0002390,2.86e-07,98;UBERON:0003061,2.86e-07,98 | |||
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| |||
|short_description=p7@CTDSP1 | |||
}} |
Revision as of 16:51, 12 September 2013
Short description: | p7@CTDSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_CTDSP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000273062, NM_021198, NM_182642, uc002vhx.2, uc002vhy.2_5end |
EntrezGene: | CTDSP1 |
HGNC: | 21614 |
UniProt: | Q9GZU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.39e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.39e-13 | 42 |
defensive cell | 1.97e-12 | 48 |
phagocyte | 1.97e-12 | 48 |
myeloid leukocyte | 6.96e-10 | 72 |
monopoietic cell | 1.70e-09 | 59 |
monocyte | 1.70e-09 | 59 |
monoblast | 1.70e-09 | 59 |
promonocyte | 1.70e-09 | 59 |
macrophage dendritic cell progenitor | 1.15e-08 | 61 |
myeloid lineage restricted progenitor cell | 2.84e-08 | 66 |
granulocyte monocyte progenitor cell | 1.32e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.23e-07 | 203 |
bone marrow | 2.33e-07 | 76 |
hematopoietic system | 2.86e-07 | 98 |
blood island | 2.86e-07 | 98 |
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