FFCP PHASE1:Hg19::chr2:206950781..206950947,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54891 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25997 | |||
|TSSclassifier=S | |||
|UniProt=Q53TQ3 | |||
|association_with_transcript=0bp_to_ENST00000233270,ENST00000403263,NM_017759,uc002vaz.3_5end | |||
|coexpression_cluster_id=C1055 | |||
|description=CAGE_peak_1_at_INO80D_5end | |||
|id=chr2:206950781..206950947,- | |||
|ontology_enrichment_celltype=CL:0000037!2.25e-37!172;CL:0000566!2.25e-37!172;CL:0000738!2.86e-37!140;CL:0002032!3.84e-34!165;CL:0000837!3.84e-34!165;CL:0000988!6.63e-34!182;CL:0002031!1.30e-31!124;CL:0002087!1.29e-30!119;CL:0000542!3.64e-17!53;CL:0000051!3.64e-17!53;CL:0000838!5.56e-17!52;CL:0000763!7.52e-17!112;CL:0000049!7.52e-17!112;CL:0002057!3.29e-16!42;CL:0000766!2.35e-15!76;CL:0000860!4.91e-15!45;CL:0000557!1.26e-14!71;CL:0000839!9.07e-14!70;CL:0002009!4.55e-13!65;CL:0002194!3.90e-12!63;CL:0000576!3.90e-12!63;CL:0000040!3.90e-12!63;CL:0000559!3.90e-12!63;CL:0000791!7.11e-09!18;CL:0000789!7.11e-09!18;CL:0002420!7.11e-09!18;CL:0002419!7.11e-09!18;CL:0000790!7.11e-09!18;CL:0000945!2.34e-08!24;CL:0000826!2.34e-08!24;CL:0000084!3.67e-08!25;CL:0000827!3.67e-08!25;CL:0000236!4.69e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.74e-15;33!CL:0002057;8.74e-15;33!CL:0002087;5.51e-11;104!CL:0000576;1.53e-10;48!CL:0000542;1.62e-10;53!CL:0000473;1.86e-10;39!CL:0000234;1.86e-10;39!CL:0000791;6.28e-09;18!CL:0000789;6.28e-09;18!CL:0002419;6.28e-09;18!CL:0000738;8.53e-09;136!CL:0000945;1.60e-08;24!CL:0000084;4.40e-08;25!CL:0000766;4.67e-08;69!CL:0000236;2.32e-07;13 | |||
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|ontology_enrichment_development_v019=CL:0002057;2.24e-12;42!CL:0000051;1.62e-10;53!CL:0000790;6.28e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-23!115;UBERON:0002390!4.13e-17!102;UBERON:0003061!4.13e-17!102;UBERON:0002193!6.72e-15!112;UBERON:0001049!1.06e-10!57;UBERON:0005068!1.06e-10!57;UBERON:0006241!1.06e-10!57;UBERON:0007135!1.06e-10!57;UBERON:0002371!3.56e-10!80;UBERON:0001017!8.13e-10!82;UBERON:0001474!1.23e-09!86;UBERON:0005743!7.38e-09!86;UBERON:0002780!1.41e-08!41;UBERON:0001890!1.41e-08!41;UBERON:0006240!1.41e-08!41;UBERON:0003080!1.58e-08!42;UBERON:0001893!3.07e-08!34;UBERON:0000073!4.41e-08!94;UBERON:0001016!4.41e-08!94;UBERON:0002791!5.34e-08!33;UBERON:0002020!6.04e-08!34;UBERON:0003528!6.04e-08!34;UBERON:0002616!7.14e-08!59;UBERON:0001869!1.06e-07!32;UBERON:0000955!1.43e-07!69;UBERON:0006238!1.43e-07!69;UBERON:0002405!3.21e-07!115;UBERON:0002619!7.65e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;3.68e-07;32!UBERON:0001893;4.03e-07;34!UBERON:0007023;4.28e-07;114!UBERON:0001869;4.83e-07;32!UBERON:0003528;5.46e-07;34!UBERON:0002020;5.46e-07;34!UBERON:0002619;7.45e-07;22!UBERON:0002780;9.17e-07;41!UBERON:0001890;9.17e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.94e-23,114;UBERON:0002390,4.00e-18,98;UBERON:0003061,4.00e-18,98;UBERON:0002193,7.46e-16,108;UBERON:0002405,2.98e-11,93;UBERON:0002371,5.83e-11,76;UBERON:0001049,9.08e-11,56;UBERON:0005068,9.08e-11,56;UBERON:0006241,9.08e-11,56;UBERON:0007135,9.08e-11,56;UBERON:0001474,2.42e-10,82;UBERON:0000073,4.92e-10,53;UBERON:0002616,4.92e-10,53;UBERON:0001017,7.66e-10,81;UBERON:0001016,6.45e-09,89;UBERON:0002780,1.35e-08,41;UBERON:0001890,1.35e-08,41;UBERON:0003080,1.35e-08,41;UBERON:0006240,1.35e-08,41;UBERON:0001893,2.94e-08,34;UBERON:0003528,5.79e-08,34;UBERON:0002020,5.79e-08,34;UBERON:0001869,1.02e-07,32;UBERON:0002791,1.17e-07,32;UBERON:0000955,1.38e-07,68;UBERON:0006238,1.38e-07,68;UBERON:0004765,3.51e-07,90;UBERON:0002619,7.40e-07,22 | |||
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| |||
|short_description=p1@INO80D | |||
}} |
Revision as of 16:12, 12 September 2013
Short description: | p1@INO80D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_INO80D_5end |
Coexpression cluster: | C1055_CD19_thymus_CD4_CD8_Neutrophils_Natural_cerebellum |
Association with transcript: | 0bp_to_ENST00000233270, ENST00000403263, NM_017759, uc002vaz.3_5end |
EntrezGene: | INO80D |
HGNC: | 25997 |
UniProt: | Q53TQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.94e-23 | 114 |
hematopoietic system | 4.00e-18 | 98 |
blood island | 4.00e-18 | 98 |
hemolymphoid system | 7.46e-16 | 108 |
immune system | 2.98e-11 | 93 |
bone marrow | 5.83e-11 | 76 |
neural tube | 9.08e-11 | 56 |
neural rod | 9.08e-11 | 56 |
future spinal cord | 9.08e-11 | 56 |
neural keel | 9.08e-11 | 56 |
bone element | 2.42e-10 | 82 |
regional part of nervous system | 4.92e-10 | 53 |
regional part of brain | 4.92e-10 | 53 |
central nervous system | 7.66e-10 | 81 |
nervous system | 6.45e-09 | 89 |
regional part of forebrain | 1.35e-08 | 41 |
forebrain | 1.35e-08 | 41 |
anterior neural tube | 1.35e-08 | 41 |
future forebrain | 1.35e-08 | 41 |
telencephalon | 2.94e-08 | 34 |
brain grey matter | 5.79e-08 | 34 |
gray matter | 5.79e-08 | 34 |
cerebral hemisphere | 1.02e-07 | 32 |
regional part of telencephalon | 1.17e-07 | 32 |
brain | 1.38e-07 | 68 |
future brain | 1.38e-07 | 68 |
skeletal element | 3.51e-07 | 90 |
regional part of cerebral cortex | 7.40e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.