FFCP PHASE1:Hg19::chr2:196411636..196411643,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1866|description=CAGE_peak_at_chr2:196411636..196411643,-|id=chr2:196411636..196411643,-|ontology_enrichment_celltype=CL:0000791!2.42e-20!18;CL:0000789!2.42e-20!18;CL:0002420!2.42e-20!18;CL:0002419!2.42e-20!18;CL:0000790!2.42e-20!18;CL:0000084!1.91e-15!25;CL:0000827!1.91e-15!25;CL:0000624!7.81e-13!6;CL:0000838!2.18e-09!52;CL:0000542!4.05e-09!53;CL:0000051!4.05e-09!53;CL:0000625!1.38e-08!11;CL:0000080!3.67e-08!6;CL:0000988!5.87e-08!182;CL:0000037!7.62e-08!172;CL:0000566!7.62e-08!172;CL:0002087!1.01e-07!119;CL:0000842!2.52e-07!3;CL:0000898!4.40e-07!3;CL:0000623!7.03e-07!3;CL:0000825!7.03e-07!3|ontology_enrichment_celltype_v019=CL:0000791;2.00e-31;18!CL:0000789;2.00e-31;18!CL:0002419;2.00e-31;18!CL:0000084;6.49e-22;25!CL:0000624;8.25e-18;6!CL:0000226;1.97e-13;3!CL:0000842;1.97e-13;3!CL:0000625;3.00e-13;11!CL:0002149;3.39e-07;6!CL:0002255;3.39e-07;6|ontology_enrichment_celltype_v019_2=CL:0000791,1.43e-31,18;CL:0000789,1.43e-31,18;CL:0002420,1.43e-31,18;CL:0002419,1.43e-31,18;CL:0000790,1.43e-31,18;CL:0000084,5.14e-22,25;CL:0000827,5.14e-22,25;CL:0000624,7.97e-18,6;CL:0000226,1.89e-13,3;CL:0000842,1.89e-13,3;CL:0000625,2.52e-13,11;CL:0000838,8.52e-13,52;CL:0000542,1.69e-12,53;CL:0000051,1.69e-12,53;CL:0000893,5.67e-10,2;CL:0002489,5.67e-10,2;CL:0000809,5.67e-10,2;CL:0000808,5.67e-10,2;CL:0000894,5.67e-10,2;CL:0000806,5.67e-10,2;CL:0000807,5.67e-10,2;CL:0000805,5.67e-10,2;CL:0002425,5.67e-10,2;CL:0000037,5.02e-08,168;CL:0002087,1.23e-07,115;CL:0000988,2.27e-07,177;CL:0002149,3.89e-07,6;CL:0002255,3.89e-07,6;CL:0000738,8.73e-07,136|ontology_enrichment_development_v019=CL:0000790;2.00e-31;18!CL:0002425;6.61e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3001;3.39e-07;6|ontology_enrichment_disease_v019_2=DOID:3001,3.89e-07,6|ontology_enrichment_uberon=UBERON:0000178!3.44e-14!15;UBERON:0000179!3.44e-14!15;UBERON:0000463!3.44e-14!15|ontology_enrichment_uberon_v019=UBERON:0000178;7.29e-13;15!UBERON:0000179;7.29e-13;15!UBERON:0000463;7.29e-13;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.64e-13,15;UBERON:0000179,6.64e-13,15;UBERON:0000463,6.64e-13,15|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,5.37361157336098,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0.647787332037959,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,2.75393678159366,2.75107533924415,2.05601498999509,0.334372990781356,0.651844533267181,0.473447805734733,0,4.12218690475142,1.17842362989935,0.886135578334485,0.270803863765016,2.0494611156108,0.780356085359269,0.822189523018381,0.829050053357545,0.579606171470105,4.89345658434799,3.47803076516627,2.09071047609954,3.85251765171725,5.74830740402882,7.21617635513523,3.79529538029254,2.22995790026868,1.30216690771284,0,2.40920190524436,2.68771883424279,2.49861453104692,1.89421801635213,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07800827419625,0,0,0.649094787309367,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57795831185113,1.37921532141349,1.2937654491571,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.48121631347465,3.23571301227925,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,1.66215201785745,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,1.70894156152249,0.238231775457789,2.05681136543097,1.94541993357815,2.16012574895246,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0,0,0,32.5724726611612,1.82587743226554,0,0,0,65.5199346423094,14.1259795033733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,1.38141957765574,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0.30607276163049,0,4.81034942126376,0,0,0,0,0,0,0,1.04135843001079,0,0.0870592065804026,0,0.51595809741485,0.870806981601766,0.292357268344742,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.412618309791701,0,0,0,0,0,0.236417121897595,0.2098183525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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1866 | |||
|description=CAGE_peak_at_chr2:196411636..196411643,- | |||
|id=chr2:196411636..196411643,- | |||
|ontology_enrichment_celltype=CL:0000791!2.42e-20!18;CL:0000789!2.42e-20!18;CL:0002420!2.42e-20!18;CL:0002419!2.42e-20!18;CL:0000790!2.42e-20!18;CL:0000084!1.91e-15!25;CL:0000827!1.91e-15!25;CL:0000624!7.81e-13!6;CL:0000838!2.18e-09!52;CL:0000542!4.05e-09!53;CL:0000051!4.05e-09!53;CL:0000625!1.38e-08!11;CL:0000080!3.67e-08!6;CL:0000988!5.87e-08!182;CL:0000037!7.62e-08!172;CL:0000566!7.62e-08!172;CL:0002087!1.01e-07!119;CL:0000842!2.52e-07!3;CL:0000898!4.40e-07!3;CL:0000623!7.03e-07!3;CL:0000825!7.03e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.00e-31;18!CL:0000789;2.00e-31;18!CL:0002419;2.00e-31;18!CL:0000084;6.49e-22;25!CL:0000624;8.25e-18;6!CL:0000226;1.97e-13;3!CL:0000842;1.97e-13;3!CL:0000625;3.00e-13;11!CL:0002149;3.39e-07;6!CL:0002255;3.39e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.43e-31,18;CL:0000789,1.43e-31,18;CL:0002420,1.43e-31,18;CL:0002419,1.43e-31,18;CL:0000790,1.43e-31,18;CL:0000084,5.14e-22,25;CL:0000827,5.14e-22,25;CL:0000624,7.97e-18,6;CL:0000226,1.89e-13,3;CL:0000842,1.89e-13,3;CL:0000625,2.52e-13,11;CL:0000838,8.52e-13,52;CL:0000542,1.69e-12,53;CL:0000051,1.69e-12,53;CL:0000893,5.67e-10,2;CL:0002489,5.67e-10,2;CL:0000809,5.67e-10,2;CL:0000808,5.67e-10,2;CL:0000894,5.67e-10,2;CL:0000806,5.67e-10,2;CL:0000807,5.67e-10,2;CL:0000805,5.67e-10,2;CL:0002425,5.67e-10,2;CL:0000037,5.02e-08,168;CL:0002087,1.23e-07,115;CL:0000988,2.27e-07,177;CL:0002149,3.89e-07,6;CL:0002255,3.89e-07,6;CL:0000738,8.73e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;2.00e-31;18!CL:0002425;6.61e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;3.39e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.89e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.44e-14!15;UBERON:0000179!3.44e-14!15;UBERON:0000463!3.44e-14!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.29e-13;15!UBERON:0000179;7.29e-13;15!UBERON:0000463;7.29e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.64e-13,15;UBERON:0000179,6.64e-13,15;UBERON:0000463,6.64e-13,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,5.37361157336098,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0.647787332037959,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,2.75393678159366,2.75107533924415,2.05601498999509,0.334372990781356,0.651844533267181,0.473447805734733,0,4.12218690475142,1.17842362989935,0.886135578334485,0.270803863765016,2.0494611156108,0.780356085359269,0.822189523018381,0.829050053357545,0.579606171470105,4.89345658434799,3.47803076516627,2.09071047609954,3.85251765171725,5.74830740402882,7.21617635513523,3.79529538029254,2.22995790026868,1.30216690771284,0,2.40920190524436,2.68771883424279,2.49861453104692,1.89421801635213,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07800827419625,0,0,0.649094787309367,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57795831185113,1.37921532141349,1.2937654491571,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.48121631347465,3.23571301227925,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,1.66215201785745,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,1.70894156152249,0.238231775457789,2.05681136543097,1.94541993357815,2.16012574895246,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0,0,0,32.5724726611612,1.82587743226554,0,0,0,65.5199346423094,14.1259795033733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,1.38141957765574,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0.30607276163049,0,4.81034942126376,0,0,0,0,0,0,0,1.04135843001079,0,0.0870592065804026,0,0.51595809741485,0.870806981601766,0.292357268344742,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.412618309791701,0,0,0,0,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7785949122191,0,0,0,0,8.56578465772636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.470958557103084,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.44495325594368,5.7332336338646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94049230734845,8.57485216499771,0,0,0,0,0,0,0,0,0,0,0,0.942928742204225,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr2:196411636..196411643,- | |||
}} |
Revision as of 15:48, 12 September 2013
Short description: | p@chr2:196411636..196411643, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:196411636..196411643, - |
Coexpression cluster: | C1866_acute_testis_mesothelioma_serous_CD4_Basophils_embryonic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.43e-31 | 18 |
alpha-beta T cell | 1.43e-31 | 18 |
immature T cell | 1.43e-31 | 18 |
mature T cell | 1.43e-31 | 18 |
immature alpha-beta T cell | 1.43e-31 | 18 |
T cell | 5.14e-22 | 25 |
pro-T cell | 5.14e-22 | 25 |
CD4-positive, alpha-beta T cell | 7.97e-18 | 6 |
single nucleate cell | 1.89e-13 | 3 |
mononuclear cell | 1.89e-13 | 3 |
CD8-positive, alpha-beta T cell | 2.52e-13 | 11 |
lymphoid lineage restricted progenitor cell | 8.52e-13 | 52 |
lymphocyte | 1.69e-12 | 53 |
common lymphoid progenitor | 1.69e-12 | 53 |
thymocyte | 5.67e-10 | 2 |
double negative thymocyte | 5.67e-10 | 2 |
double-positive, alpha-beta thymocyte | 5.67e-10 | 2 |
DN4 thymocyte | 5.67e-10 | 2 |
DN1 thymic pro-T cell | 5.67e-10 | 2 |
DN2 thymocyte | 5.67e-10 | 2 |
DN3 thymocyte | 5.67e-10 | 2 |
immature single positive thymocyte | 5.67e-10 | 2 |
early T lineage precursor | 5.67e-10 | 2 |
hematopoietic stem cell | 5.02e-08 | 168 |
nongranular leukocyte | 1.23e-07 | 115 |
hematopoietic cell | 2.27e-07 | 177 |
epithelial cell of uterus | 3.89e-07 | 6 |
stromal cell of endometrium | 3.89e-07 | 6 |
leukocyte | 8.73e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 6.64e-13 | 15 |
haemolymphatic fluid | 6.64e-13 | 15 |
organism substance | 6.64e-13 | 15 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.89e-07 | 6 |
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