FFCP PHASE1:Hg19::chr2:163137897..163137919,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64135|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=18873|TSSclassifier=S|UniProt=Q9BYX4|association_with_transcript=18bp_to_AK056293_5end|description=CAGE_peak_5_at_IFIH1_5end|id=chr2:163137897..163137919,-|ontology_enrichment_celltype=CL:0000860!2.15e-17!45;CL:0002057!3.11e-16!42;CL:0002009!5.09e-13!65;CL:0002194!1.06e-12!63;CL:0000576!1.06e-12!63;CL:0000040!1.06e-12!63;CL:0000559!1.06e-12!63;CL:0000557!1.31e-11!71;CL:0002087!1.48e-11!119;CL:0000839!5.70e-11!70;CL:0002032!1.57e-10!165;CL:0000837!1.57e-10!165;CL:0000763!2.21e-10!112;CL:0000049!2.21e-10!112;CL:0000037!2.62e-10!172;CL:0000566!2.62e-10!172;CL:0000738!2.63e-10!140;CL:0000766!4.17e-10!76;CL:0002031!6.38e-10!124;CL:0000988!3.26e-09!182|ontology_enrichment_celltype_v019=CL:0000860;1.02e-55;33!CL:0002057;1.02e-55;33!CL:0000473;9.62e-38;39!CL:0000234;9.62e-38;39!CL:0000576;9.87e-26;48!CL:0000766;1.65e-13;69!CL:0002087;4.27e-10;104!CL:0000763;1.30e-09;100|ontology_enrichment_celltype_v019_2=CL:0000860,9.47e-48,42;CL:0002057,9.47e-48,42;CL:0000473,1.89e-41,48;CL:0000234,1.89e-41,48;CL:0002194,1.27e-32,59;CL:0000576,1.27e-32,59;CL:0000040,1.27e-32,59;CL:0000559,1.27e-32,59;CL:0002009,1.75e-31,61;CL:0000839,6.26e-29,66;CL:0000557,1.83e-28,67;CL:0000766,2.50e-26,72;CL:0002087,9.55e-18,115;CL:0002031,6.85e-17,120;CL:0000763,1.03e-16,108;CL:0000049,1.03e-16,108;CL:0000738,1.43e-14,136;CL:0002032,7.36e-12,161;CL:0000837,7.36e-12,161;CL:0000037,3.04e-11,168;CL:0000988,1.60e-10,177|ontology_enrichment_development_v019=CL:0002057;2.47e-33;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;1.55e-09;1!DOID:0050177;1.55e-09;1!DOID:0050427;1.55e-09;1|ontology_enrichment_disease_v019_2=DOID:630,1.15e-09,1;DOID:0050177,1.15e-09,1;DOID:0050427,1.15e-09,1|ontology_enrichment_uberon=UBERON:0002371!4.19e-11!80;UBERON:0002390!5.69e-11!102;UBERON:0003061!5.69e-11!102;UBERON:0002193!3.27e-10!112;UBERON:0001474!4.62e-10!86;UBERON:0004765!1.18e-08!101;UBERON:0001434!1.18e-08!101;UBERON:0002405!8.31e-08!115;UBERON:0001737!9.50e-07!9|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.11e-25,76;UBERON:0001474,7.99e-23,82;UBERON:0004765,1.42e-20,90;UBERON:0002405,7.90e-20,93;UBERON:0002390,1.10e-18,98;UBERON:0003061,1.10e-18,98;UBERON:0001434,2.92e-18,100;UBERON:0002193,1.03e-16,108;UBERON:0002204,2.34e-11,167;UBERON:0003081,8.08e-09,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.671746422719773,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0.309706370895104,1.7261543539329,1.5369642391746,1.18241114944293,1.72372840368309,0,1.35426486594342,0.564727018627814,0.545812300115692,0,2.44867113896722,0,1.27867425159808,0.989553900560148,0.997318288108159,0.426224750532694,13.0594157382863,1.70215567407342,1.24564449799115,2.76373531782418,6.25779502104242,1.08594422352558,11.502590550034,1.10483290796269,2.53169909952708,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0,0,0,0.512365278902701,0.390178042679635,0.657751618414705,0.552700035571697,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.220587945464788,0.435758888184812,0,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0,0,0,0.445893486866185,0,0.503946384596579,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0.336255431980582,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,3.1682753652067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0,0,0,0,0.635020748171649,0,0.280797178113459,0,0.313359791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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18873 | |||
|TSSclassifier=S | |||
|UniProt=Q9BYX4 | |||
|association_with_transcript=18bp_to_AK056293_5end | |||
|description=CAGE_peak_5_at_IFIH1_5end | |||
|id=chr2:163137897..163137919,- | |||
|ontology_enrichment_celltype=CL:0000860!2.15e-17!45;CL:0002057!3.11e-16!42;CL:0002009!5.09e-13!65;CL:0002194!1.06e-12!63;CL:0000576!1.06e-12!63;CL:0000040!1.06e-12!63;CL:0000559!1.06e-12!63;CL:0000557!1.31e-11!71;CL:0002087!1.48e-11!119;CL:0000839!5.70e-11!70;CL:0002032!1.57e-10!165;CL:0000837!1.57e-10!165;CL:0000763!2.21e-10!112;CL:0000049!2.21e-10!112;CL:0000037!2.62e-10!172;CL:0000566!2.62e-10!172;CL:0000738!2.63e-10!140;CL:0000766!4.17e-10!76;CL:0002031!6.38e-10!124;CL:0000988!3.26e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-55;33!CL:0002057;1.02e-55;33!CL:0000473;9.62e-38;39!CL:0000234;9.62e-38;39!CL:0000576;9.87e-26;48!CL:0000766;1.65e-13;69!CL:0002087;4.27e-10;104!CL:0000763;1.30e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.47e-48,42;CL:0002057,9.47e-48,42;CL:0000473,1.89e-41,48;CL:0000234,1.89e-41,48;CL:0002194,1.27e-32,59;CL:0000576,1.27e-32,59;CL:0000040,1.27e-32,59;CL:0000559,1.27e-32,59;CL:0002009,1.75e-31,61;CL:0000839,6.26e-29,66;CL:0000557,1.83e-28,67;CL:0000766,2.50e-26,72;CL:0002087,9.55e-18,115;CL:0002031,6.85e-17,120;CL:0000763,1.03e-16,108;CL:0000049,1.03e-16,108;CL:0000738,1.43e-14,136;CL:0002032,7.36e-12,161;CL:0000837,7.36e-12,161;CL:0000037,3.04e-11,168;CL:0000988,1.60e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.47e-33;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.55e-09;1!DOID:0050177;1.55e-09;1!DOID:0050427;1.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.15e-09,1;DOID:0050177,1.15e-09,1;DOID:0050427,1.15e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.19e-11!80;UBERON:0002390!5.69e-11!102;UBERON:0003061!5.69e-11!102;UBERON:0002193!3.27e-10!112;UBERON:0001474!4.62e-10!86;UBERON:0004765!1.18e-08!101;UBERON:0001434!1.18e-08!101;UBERON:0002405!8.31e-08!115;UBERON:0001737!9.50e-07!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.11e-25,76;UBERON:0001474,7.99e-23,82;UBERON:0004765,1.42e-20,90;UBERON:0002405,7.90e-20,93;UBERON:0002390,1.10e-18,98;UBERON:0003061,1.10e-18,98;UBERON:0001434,2.92e-18,100;UBERON:0002193,1.03e-16,108;UBERON:0002204,2.34e-11,167;UBERON:0003081,8.08e-09,203 | |||
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| |||
|short_description=p5@IFIH1 | |||
}} |
Revision as of 14:25, 12 September 2013
Short description: | p5@IFIH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_IFIH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_AK056293_5end |
EntrezGene: | IFIH1 |
HGNC: | 18873 |
UniProt: | Q9BYX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.47e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.47e-48 | 42 |
defensive cell | 1.89e-41 | 48 |
phagocyte | 1.89e-41 | 48 |
monopoietic cell | 1.27e-32 | 59 |
monocyte | 1.27e-32 | 59 |
monoblast | 1.27e-32 | 59 |
promonocyte | 1.27e-32 | 59 |
macrophage dendritic cell progenitor | 1.75e-31 | 61 |
myeloid lineage restricted progenitor cell | 6.26e-29 | 66 |
granulocyte monocyte progenitor cell | 1.83e-28 | 67 |
myeloid leukocyte | 2.50e-26 | 72 |
nongranular leukocyte | 9.55e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 6.85e-17 | 120 |
myeloid cell | 1.03e-16 | 108 |
common myeloid progenitor | 1.03e-16 | 108 |
leukocyte | 1.43e-14 | 136 |
hematopoietic oligopotent progenitor cell | 7.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.36e-12 | 161 |
hematopoietic stem cell | 3.04e-11 | 168 |
hematopoietic cell | 1.60e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.11e-25 | 76 |
bone element | 7.99e-23 | 82 |
skeletal element | 1.42e-20 | 90 |
immune system | 7.90e-20 | 93 |
hematopoietic system | 1.10e-18 | 98 |
blood island | 1.10e-18 | 98 |
skeletal system | 2.92e-18 | 100 |
hemolymphoid system | 1.03e-16 | 108 |
musculoskeletal system | 2.34e-11 | 167 |
lateral plate mesoderm | 8.08e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.15e-09 | 1 |
monogenic disease | 1.15e-09 | 1 |
xeroderma pigmentosum | 1.15e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.