FFCP PHASE1:Hg19::chr2:152146312..152146323,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9111|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7854|TSSclassifier=S|UniProt=|association_with_transcript=53bp_to_ENST00000477072,ENST00000491771_5end|description=CAGE_peak_6_at_NMI_5end|id=chr2:152146312..152146323,-|ontology_enrichment_celltype=CL:0000037!4.71e-33!172;CL:0000566!4.71e-33!172;CL:0000988!6.67e-31!182;CL:0002032!1.46e-30!165;CL:0000837!1.46e-30!165;CL:0000738!3.74e-29!140;CL:0002087!3.46e-25!119;CL:0002031!1.44e-24!124;CL:0000763!1.62e-15!112;CL:0000049!1.62e-15!112;CL:0000838!4.97e-15!52;CL:0000542!5.54e-15!53;CL:0000051!5.54e-15!53;CL:0002057!4.72e-12!42;CL:0000766!5.40e-12!76;CL:0000860!5.45e-12!45;CL:0000084!3.64e-11!25;CL:0000827!3.64e-11!25;CL:0002009!1.96e-10!65;CL:0000134!2.38e-10!358;CL:0002320!3.67e-10!365;CL:0000839!9.55e-10!70;CL:0002194!9.66e-10!63;CL:0000576!9.66e-10!63;CL:0000040!9.66e-10!63;CL:0000559!9.66e-10!63;CL:0000557!3.06e-09!71;CL:0000791!2.49e-08!18;CL:0000789!2.49e-08!18;CL:0002420!2.49e-08!18;CL:0002419!2.49e-08!18;CL:0000790!2.49e-08!18;CL:0000219!1.85e-07!390|ontology_enrichment_celltype_v019=CL:0000473;5.69e-13;39!CL:0000234;5.69e-13;39!CL:0000860;1.81e-12;33!CL:0002057;1.81e-12;33!CL:0000094;2.18e-12;8!CL:0000081;1.75e-11;11!CL:0002087;3.41e-10;104!CL:0000775;2.30e-09;3!CL:0000542;1.54e-08;53!CL:0000738;1.85e-08;136!CL:0000945;2.50e-08;24!CL:0000766;7.26e-08;69!CL:0000084;1.18e-07;25!CL:0000576;1.45e-07;48!CL:0000791;2.42e-07;18!CL:0000789;2.42e-07;18!CL:0002419;2.42e-07;18|ontology_enrichment_celltype_v019_2=CL:0000738,4.31e-35,136;CL:0000037,4.39e-34,168;CL:0000988,5.27e-33,177;CL:0002032,2.76e-30,161;CL:0000837,2.76e-30,161;CL:0002087,1.99e-28,115;CL:0002031,8.65e-27,120;CL:0000766,2.12e-17,72;CL:0000838,7.88e-17,52;CL:0000542,2.12e-16,53;CL:0000051,2.12e-16,53;CL:0000473,1.28e-14,48;CL:0000234,1.28e-14,48;CL:0000763,2.78e-14,108;CL:0000049,2.78e-14,108;CL:0000860,6.29e-14,42;CL:0002057,6.29e-14,42;CL:0000094,2.07e-12,8;CL:0000134,7.91e-12,354;CL:0000081,1.82e-11,11;CL:0000839,2.32e-11,66;CL:0002320,2.60e-11,361;CL:0002194,1.10e-10,59;CL:0000576,1.10e-10,59;CL:0000040,1.10e-10,59;CL:0000559,1.10e-10,59;CL:0002009,3.51e-10,61;CL:0000557,5.38e-10,67;CL:0000219,1.68e-09,386;CL:0000775,2.18e-09,3;CL:0000945,2.42e-08,24;CL:0000826,2.42e-08,24;CL:0000034,2.99e-08,441;CL:0000084,1.09e-07,25;CL:0000827,1.09e-07,25;CL:0000791,1.64e-07,18;CL:0000789,1.64e-07,18;CL:0002420,1.64e-07,18;CL:0002419,1.64e-07,18;CL:0000790,1.64e-07,18;CL:0000048,2.49e-07,427;CL:0000723,4.90e-07,433|ontology_enrichment_development_v019=CL:0002057;8.22e-11;42!CL:0000051;1.54e-08;53!CL:0000790;2.42e-07;18|ontology_enrichment_disease=DOID:2531!6.96e-08!51;DOID:0060083!6.96e-08!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.88e-14!102;UBERON:0003061!6.88e-14!102;UBERON:0002193!1.85e-11!112;UBERON:0002384!1.92e-10!375;UBERON:0002371!2.47e-09!80;UBERON:0001474!2.53e-08!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.30e-14,98;UBERON:0003061,1.30e-14,98;UBERON:0002193,1.52e-12,108;UBERON:0002371,1.61e-11,76;UBERON:0001474,2.27e-11,82;UBERON:0002384,3.11e-11,371;UBERON:0004765,7.95e-10,90;UBERON:0002405,2.84e-09,93;UBERON:0001434,3.34e-09,100|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0.273748850145768,0,1.06978768047132,1.47781061009902,1.02324015707783,0,4.22212337906934,0.77408061658038,0,0,0,0.232401601740905,0.426507697462265,1.17440175733939,2.21598163412751,2.4065333696417,0.434021741431704,0.447830948479849,0.32389366601898,0.257575567634187,0.290796477559129,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,3.45230870786581,1.2808035326455,0.945928919554341,1.37898272294647,1.29096936716765,4.06279459783025,0.376484679085209,0.545812300115692,0.224723484445085,0.918251677112708,0,0,4.61791820261403,2.79249120670285,3.40979800426155,4.06292934080018,0.56738522469114,3.11411124497787,2.76373531782418,2.08593167368081,1.52032191293582,3.63239701580021,0.736555271975129,2.21523671208619,0,0.425208599930087,0.628975936525128,0,0,0.48217676009124,0,0,0.547992461293902,0,0,0.889509253863555,0,0,0.574752439954483,0,0,1.70763890732835,0.587237189370939,2.6759125968766,2.64342657158052,3.92355994087075,1.05353633910031,1.37696839079683,1.96505381374582,2.2616164889946,0.668745981562712,0.32592226663359,0,0,1.33692548262208,0.589211814949674,1.55073726208535,0.812411591295047,1.0247305578054,1.69077151827842,0.493313713811028,1.10540007114339,0.869409257205157,0.444859689486181,0.802622484269139,0,0.906474741580529,0.766440987203842,0.68725489096526,0.759059076058509,0.637130828648193,1.95325036156926,0.950452044448374,0.752875595388864,1.02389288923535,0,0.473554504088034,0.821127996921047,0.201606743224732,2.40696176205157,1.30341963494519,0,0.670700859703636,0.255725123687061,0.7228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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7854 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=53bp_to_ENST00000477072,ENST00000491771_5end | |||
|description=CAGE_peak_6_at_NMI_5end | |||
|id=chr2:152146312..152146323,- | |||
|ontology_enrichment_celltype=CL:0000037!4.71e-33!172;CL:0000566!4.71e-33!172;CL:0000988!6.67e-31!182;CL:0002032!1.46e-30!165;CL:0000837!1.46e-30!165;CL:0000738!3.74e-29!140;CL:0002087!3.46e-25!119;CL:0002031!1.44e-24!124;CL:0000763!1.62e-15!112;CL:0000049!1.62e-15!112;CL:0000838!4.97e-15!52;CL:0000542!5.54e-15!53;CL:0000051!5.54e-15!53;CL:0002057!4.72e-12!42;CL:0000766!5.40e-12!76;CL:0000860!5.45e-12!45;CL:0000084!3.64e-11!25;CL:0000827!3.64e-11!25;CL:0002009!1.96e-10!65;CL:0000134!2.38e-10!358;CL:0002320!3.67e-10!365;CL:0000839!9.55e-10!70;CL:0002194!9.66e-10!63;CL:0000576!9.66e-10!63;CL:0000040!9.66e-10!63;CL:0000559!9.66e-10!63;CL:0000557!3.06e-09!71;CL:0000791!2.49e-08!18;CL:0000789!2.49e-08!18;CL:0002420!2.49e-08!18;CL:0002419!2.49e-08!18;CL:0000790!2.49e-08!18;CL:0000219!1.85e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.69e-13;39!CL:0000234;5.69e-13;39!CL:0000860;1.81e-12;33!CL:0002057;1.81e-12;33!CL:0000094;2.18e-12;8!CL:0000081;1.75e-11;11!CL:0002087;3.41e-10;104!CL:0000775;2.30e-09;3!CL:0000542;1.54e-08;53!CL:0000738;1.85e-08;136!CL:0000945;2.50e-08;24!CL:0000766;7.26e-08;69!CL:0000084;1.18e-07;25!CL:0000576;1.45e-07;48!CL:0000791;2.42e-07;18!CL:0000789;2.42e-07;18!CL:0002419;2.42e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.31e-35,136;CL:0000037,4.39e-34,168;CL:0000988,5.27e-33,177;CL:0002032,2.76e-30,161;CL:0000837,2.76e-30,161;CL:0002087,1.99e-28,115;CL:0002031,8.65e-27,120;CL:0000766,2.12e-17,72;CL:0000838,7.88e-17,52;CL:0000542,2.12e-16,53;CL:0000051,2.12e-16,53;CL:0000473,1.28e-14,48;CL:0000234,1.28e-14,48;CL:0000763,2.78e-14,108;CL:0000049,2.78e-14,108;CL:0000860,6.29e-14,42;CL:0002057,6.29e-14,42;CL:0000094,2.07e-12,8;CL:0000134,7.91e-12,354;CL:0000081,1.82e-11,11;CL:0000839,2.32e-11,66;CL:0002320,2.60e-11,361;CL:0002194,1.10e-10,59;CL:0000576,1.10e-10,59;CL:0000040,1.10e-10,59;CL:0000559,1.10e-10,59;CL:0002009,3.51e-10,61;CL:0000557,5.38e-10,67;CL:0000219,1.68e-09,386;CL:0000775,2.18e-09,3;CL:0000945,2.42e-08,24;CL:0000826,2.42e-08,24;CL:0000034,2.99e-08,441;CL:0000084,1.09e-07,25;CL:0000827,1.09e-07,25;CL:0000791,1.64e-07,18;CL:0000789,1.64e-07,18;CL:0002420,1.64e-07,18;CL:0002419,1.64e-07,18;CL:0000790,1.64e-07,18;CL:0000048,2.49e-07,427;CL:0000723,4.90e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.22e-11;42!CL:0000051;1.54e-08;53!CL:0000790;2.42e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!6.96e-08!51;DOID:0060083!6.96e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.88e-14!102;UBERON:0003061!6.88e-14!102;UBERON:0002193!1.85e-11!112;UBERON:0002384!1.92e-10!375;UBERON:0002371!2.47e-09!80;UBERON:0001474!2.53e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.30e-14,98;UBERON:0003061,1.30e-14,98;UBERON:0002193,1.52e-12,108;UBERON:0002371,1.61e-11,76;UBERON:0001474,2.27e-11,82;UBERON:0002384,3.11e-11,371;UBERON:0004765,7.95e-10,90;UBERON:0002405,2.84e-09,93;UBERON:0001434,3.34e-09,100 | |||
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| |||
|short_description=p6@NMI | |||
}} |
Revision as of 13:59, 12 September 2013
Short description: | p6@NMI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NMI_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000477072, ENST00000491771_5end |
EntrezGene: | NMI |
HGNC: | 7854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.30e-14 | 98 |
blood island | 1.30e-14 | 98 |
hemolymphoid system | 1.52e-12 | 108 |
bone marrow | 1.61e-11 | 76 |
bone element | 2.27e-11 | 82 |
connective tissue | 3.11e-11 | 371 |
skeletal element | 7.95e-10 | 90 |
immune system | 2.84e-09 | 93 |
skeletal system | 3.34e-09 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.