FFCP PHASE1:Hg19::chr2:95691395..95691406,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4118|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6817|TSSclassifier=S|UniProt=|association_with_transcript=-15bp_to_ENST00000489399_5end|coexpression_cluster_id=C18|description=CAGE_peak_2_at_MAL_5end|id=chr2:95691395..95691406,+|ontology_enrichment_celltype=CL:0000791!1.90e-15!18;CL:0000789!1.90e-15!18;CL:0002420!1.90e-15!18;CL:0002419!1.90e-15!18;CL:0000790!1.90e-15!18;CL:0000084!3.21e-14!25;CL:0000827!3.21e-14!25;CL:0000625!4.35e-11!11;CL:0000838!1.04e-09!52;CL:0000542!2.55e-09!53;CL:0000051!2.55e-09!53;CL:0000624!2.35e-07!6|ontology_enrichment_celltype_v019=CL:0000791;6.34e-21;18!CL:0000789;6.34e-21;18!CL:0002419;6.34e-21;18!CL:0000084;5.54e-20;25!CL:0000625;1.19e-14;11!CL:0000624;1.58e-09;6|ontology_enrichment_celltype_v019_2=CL:0000791,6.53e-21,18;CL:0000789,6.53e-21,18;CL:0002420,6.53e-21,18;CL:0002419,6.53e-21,18;CL:0000790,6.53e-21,18;CL:0000084,7.39e-20,25;CL:0000827,7.39e-20,25;CL:0000625,1.22e-14,11;CL:0000838,4.09e-12,52;CL:0000542,1.02e-11,53;CL:0000051,1.02e-11,53;CL:0000624,1.59e-09,6|ontology_enrichment_development_v019=CL:0000790;6.34e-21;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.26e-44!115;UBERON:0001049!7.67e-15!57;UBERON:0005068!7.67e-15!57;UBERON:0006241!7.67e-15!57;UBERON:0007135!7.67e-15!57;UBERON:0000178!9.84e-13!15;UBERON:0000179!9.84e-13!15;UBERON:0000463!9.84e-13!15;UBERON:0002616!4.98e-11!59;UBERON:0003080!1.10e-10!42;UBERON:0003075!1.60e-10!86;UBERON:0007284!1.60e-10!86;UBERON:0002780!2.20e-10!41;UBERON:0001890!2.20e-10!41;UBERON:0006240!2.20e-10!41;UBERON:0001893!3.25e-10!34;UBERON:0002020!3.70e-10!34;UBERON:0003528!3.70e-10!34;UBERON:0002791!8.78e-10!33;UBERON:0002346!2.22e-09!90;UBERON:0005743!3.12e-09!86;UBERON:0001869!3.61e-09!32;UBERON:0001017!3.69e-09!82;UBERON:0000955!1.08e-08!69;UBERON:0006238!1.08e-08!69;UBERON:0000073!1.09e-07!94;UBERON:0001016!1.09e-07!94;UBERON:0003056!2.36e-07!61|ontology_enrichment_uberon_v019=UBERON:0000178;6.20e-17;15!UBERON:0000179;6.20e-17;15!UBERON:0000463;6.20e-17;15!UBERON:0007023;6.13e-09;114!UBERON:0002390;7.50e-09;32!UBERON:0001893;4.25e-08;34!UBERON:0000073;7.03e-08;53!UBERON:0002616;7.03e-08;53!UBERON:0003528;7.46e-08;34!UBERON:0002020;7.46e-08;34!UBERON:0002791;1.11e-07;32!UBERON:0001869;2.12e-07;32!UBERON:0002780;2.24e-07;41!UBERON:0001890;2.24e-07;41!UBERON:0002619;6.83e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-36,114;UBERON:0000178,6.69e-17,15;UBERON:0000179,6.69e-17,15;UBERON:0000463,6.69e-17,15;UBERON:0001049,7.96e-15,56;UBERON:0005068,7.96e-15,56;UBERON:0006241,7.96e-15,56;UBERON:0007135,7.96e-15,56;UBERON:0000073,7.34e-13,53;UBERON:0002616,7.34e-13,53;UBERON:0003075,1.40e-10,82;UBERON:0007284,1.40e-10,82;UBERON:0002780,7.72e-10,41;UBERON:0001890,7.72e-10,41;UBERON:0003080,7.72e-10,41;UBERON:0006240,7.72e-10,41;UBERON:0001893,9.67e-10,34;UBERON:0003528,1.12e-09,34;UBERON:0002020,1.12e-09,34;UBERON:0002346,1.34e-09,86;UBERON:0000955,2.83e-09,68;UBERON:0006238,2.83e-09,68;UBERON:0001017,5.13e-09,81;UBERON:0002791,1.60e-08,32;UBERON:0001869,1.83e-08,32;UBERON:0001016,7.12e-08,89;UBERON:0002619,6.69e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0,0.916960868975415,0.656804715599566,1.02324015707783,4.32700704533794,0.383829398097213,1.39334510984468,0,0,0,0,0,0.293600439334847,5.53995408531877,6.21687787157439,9.98250005292918,0.447830948479849,2.26725566213286,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0.47296445977717,0,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,0.852449501065388,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,1.70763890732835,1.76171156811282,0,0,5.04457706683382,0,57.8326724134669,69.9559157693513,60.0356377078567,24.5764148224297,76.2658103922601,100.370934815763,62.3445530905316,26.961330566212,47.7261570109236,55.1619397513217,25.1847593301464,42.3982268291985,28.0928190729337,55.5800117560425,60.7970039128866,42.6010536030527,58.4249058858518,48.6924307123278,49.1316961883391,34.4460401800601,50.2018846618517,58.4166657320471,29.3502842742623,36.316457232947,31.9030892389645,37.0676297334866,38.0955051266765,38.7799431797888,21.2382235138988,31.9649290259423,25.4549679045524,10.8867641341356,9.62784704820626,27.2269879299662,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,3.1434978119451,0.364295288292542,0,0.324547393654683,0,0.398873881556595,1.19245312152671,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,1.15930404975077,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6817 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_ENST00000489399_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_MAL_5end | |||
|id=chr2:95691395..95691406,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.90e-15!18;CL:0000789!1.90e-15!18;CL:0002420!1.90e-15!18;CL:0002419!1.90e-15!18;CL:0000790!1.90e-15!18;CL:0000084!3.21e-14!25;CL:0000827!3.21e-14!25;CL:0000625!4.35e-11!11;CL:0000838!1.04e-09!52;CL:0000542!2.55e-09!53;CL:0000051!2.55e-09!53;CL:0000624!2.35e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.34e-21;18!CL:0000789;6.34e-21;18!CL:0002419;6.34e-21;18!CL:0000084;5.54e-20;25!CL:0000625;1.19e-14;11!CL:0000624;1.58e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.53e-21,18;CL:0000789,6.53e-21,18;CL:0002420,6.53e-21,18;CL:0002419,6.53e-21,18;CL:0000790,6.53e-21,18;CL:0000084,7.39e-20,25;CL:0000827,7.39e-20,25;CL:0000625,1.22e-14,11;CL:0000838,4.09e-12,52;CL:0000542,1.02e-11,53;CL:0000051,1.02e-11,53;CL:0000624,1.59e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000790;6.34e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.26e-44!115;UBERON:0001049!7.67e-15!57;UBERON:0005068!7.67e-15!57;UBERON:0006241!7.67e-15!57;UBERON:0007135!7.67e-15!57;UBERON:0000178!9.84e-13!15;UBERON:0000179!9.84e-13!15;UBERON:0000463!9.84e-13!15;UBERON:0002616!4.98e-11!59;UBERON:0003080!1.10e-10!42;UBERON:0003075!1.60e-10!86;UBERON:0007284!1.60e-10!86;UBERON:0002780!2.20e-10!41;UBERON:0001890!2.20e-10!41;UBERON:0006240!2.20e-10!41;UBERON:0001893!3.25e-10!34;UBERON:0002020!3.70e-10!34;UBERON:0003528!3.70e-10!34;UBERON:0002791!8.78e-10!33;UBERON:0002346!2.22e-09!90;UBERON:0005743!3.12e-09!86;UBERON:0001869!3.61e-09!32;UBERON:0001017!3.69e-09!82;UBERON:0000955!1.08e-08!69;UBERON:0006238!1.08e-08!69;UBERON:0000073!1.09e-07!94;UBERON:0001016!1.09e-07!94;UBERON:0003056!2.36e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.20e-17;15!UBERON:0000179;6.20e-17;15!UBERON:0000463;6.20e-17;15!UBERON:0007023;6.13e-09;114!UBERON:0002390;7.50e-09;32!UBERON:0001893;4.25e-08;34!UBERON:0000073;7.03e-08;53!UBERON:0002616;7.03e-08;53!UBERON:0003528;7.46e-08;34!UBERON:0002020;7.46e-08;34!UBERON:0002791;1.11e-07;32!UBERON:0001869;2.12e-07;32!UBERON:0002780;2.24e-07;41!UBERON:0001890;2.24e-07;41!UBERON:0002619;6.83e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-36,114;UBERON:0000178,6.69e-17,15;UBERON:0000179,6.69e-17,15;UBERON:0000463,6.69e-17,15;UBERON:0001049,7.96e-15,56;UBERON:0005068,7.96e-15,56;UBERON:0006241,7.96e-15,56;UBERON:0007135,7.96e-15,56;UBERON:0000073,7.34e-13,53;UBERON:0002616,7.34e-13,53;UBERON:0003075,1.40e-10,82;UBERON:0007284,1.40e-10,82;UBERON:0002780,7.72e-10,41;UBERON:0001890,7.72e-10,41;UBERON:0003080,7.72e-10,41;UBERON:0006240,7.72e-10,41;UBERON:0001893,9.67e-10,34;UBERON:0003528,1.12e-09,34;UBERON:0002020,1.12e-09,34;UBERON:0002346,1.34e-09,86;UBERON:0000955,2.83e-09,68;UBERON:0006238,2.83e-09,68;UBERON:0001017,5.13e-09,81;UBERON:0002791,1.60e-08,32;UBERON:0001869,1.83e-08,32;UBERON:0001016,7.12e-08,89;UBERON:0002619,6.69e-07,22 | |||
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| |||
|short_description=p2@MAL | |||
}} |
Revision as of 20:13, 12 September 2013
Short description: | p2@MAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MAL_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -15bp_to_ENST00000489399_5end |
EntrezGene: | MAL |
HGNC: | 6817 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.53e-21 | 18 |
alpha-beta T cell | 6.53e-21 | 18 |
immature T cell | 6.53e-21 | 18 |
mature T cell | 6.53e-21 | 18 |
immature alpha-beta T cell | 6.53e-21 | 18 |
T cell | 7.39e-20 | 25 |
pro-T cell | 7.39e-20 | 25 |
CD8-positive, alpha-beta T cell | 1.22e-14 | 11 |
lymphoid lineage restricted progenitor cell | 4.09e-12 | 52 |
lymphocyte | 1.02e-11 | 53 |
common lymphoid progenitor | 1.02e-11 | 53 |
CD4-positive, alpha-beta T cell | 1.59e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.09e-36 | 114 |
blood | 6.69e-17 | 15 |
haemolymphatic fluid | 6.69e-17 | 15 |
organism substance | 6.69e-17 | 15 |
neural tube | 7.96e-15 | 56 |
neural rod | 7.96e-15 | 56 |
future spinal cord | 7.96e-15 | 56 |
neural keel | 7.96e-15 | 56 |
regional part of nervous system | 7.34e-13 | 53 |
regional part of brain | 7.34e-13 | 53 |
neural plate | 1.40e-10 | 82 |
presumptive neural plate | 1.40e-10 | 82 |
regional part of forebrain | 7.72e-10 | 41 |
forebrain | 7.72e-10 | 41 |
anterior neural tube | 7.72e-10 | 41 |
future forebrain | 7.72e-10 | 41 |
telencephalon | 9.67e-10 | 34 |
brain grey matter | 1.12e-09 | 34 |
gray matter | 1.12e-09 | 34 |
neurectoderm | 1.34e-09 | 86 |
brain | 2.83e-09 | 68 |
future brain | 2.83e-09 | 68 |
central nervous system | 5.13e-09 | 81 |
regional part of telencephalon | 1.60e-08 | 32 |
cerebral hemisphere | 1.83e-08 | 32 |
nervous system | 7.12e-08 | 89 |
regional part of cerebral cortex | 6.69e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.