FFCP PHASE1:Hg19::chr2:85636928..85636947,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=822|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1474|TSSclassifier=W|UniProt=E7ENU9|association_with_transcript=7bp_to_ENST00000449030_5end|coexpression_cluster_id=C602|description=CAGE_peak_4_at_CAPG_5end|id=chr2:85636928..85636947,-|ontology_enrichment_celltype=CL:0000037!1.78e-22!172;CL:0000566!1.78e-22!172;CL:0000763!2.44e-21!112;CL:0000049!2.44e-21!112;CL:0002032!9.23e-21!165;CL:0000837!9.23e-21!165;CL:0000988!1.36e-19!182;CL:0000557!1.96e-16!71;CL:0000738!3.19e-16!140;CL:0002031!9.86e-16!124;CL:0000839!2.66e-15!70;CL:0000766!5.13e-14!76;CL:0002009!3.35e-13!65;CL:0002087!3.38e-12!119;CL:0002194!8.29e-12!63;CL:0000576!8.29e-12!63;CL:0000040!8.29e-12!63;CL:0000559!8.29e-12!63;CL:0000840!2.08e-07!5;CL:0001029!2.08e-07!5;CL:0000451!3.71e-07!10;CL:0002274!8.78e-07!5;CL:0000457!8.78e-07!5;CL:0002191!8.78e-07!5;CL:0000097!8.78e-07!5;CL:0000831!8.78e-07!5;CL:0002028!8.78e-07!5|ontology_enrichment_celltype_v019=CL:0000235;1.78e-19;6!CL:0000840;1.20e-17;5!CL:0000451;4.45e-16;10!CL:0000097;7.02e-16;5!CL:0000990;1.63e-11;8!CL:0002619;2.17e-10;3!CL:0000766;4.16e-09;69!CL:0000763;4.56e-09;100!CL:0000784;5.29e-09;3!CL:0000738;6.37e-09;136!CL:0000163;1.27e-08;9!CL:0001014;2.11e-07;2!CL:0001016;2.11e-07;2!CL:0000236;2.54e-07;13|ontology_enrichment_celltype_v019_2=CL:0000037,3.92e-35,168;CL:0000763,7.34e-34,108;CL:0000049,7.34e-34,108;CL:0002032,8.62e-34,161;CL:0000837,8.62e-34,161;CL:0000988,1.07e-32,177;CL:0000557,9.57e-30,67;CL:0002031,2.62e-27,120;CL:0000738,6.55e-26,136;CL:0000839,1.27e-25,66;CL:0000766,6.70e-23,72;CL:0002009,1.73e-21,61;CL:0000235,1.76e-19,6;CL:0002194,2.90e-18,59;CL:0000576,2.90e-18,59;CL:0000040,2.90e-18,59;CL:0000559,2.90e-18,59;CL:0000840,1.27e-17,5;CL:0001029,1.27e-17,5;CL:0002087,2.06e-17,115;CL:0000451,4.65e-16,10;CL:0000097,6.54e-16,5;CL:0002028,6.54e-16,5;CL:0000990,1.70e-11,8;CL:0000134,2.09e-11,354;CL:0002320,6.12e-11,361;CL:0000219,1.15e-10,386;CL:0002619,2.18e-10,3;CL:0000784,5.23e-09,3;CL:0000163,1.22e-08,9;CL:0000048,7.39e-08,427;CL:0000723,1.41e-07,433;CL:0001014,2.11e-07,2;CL:0001016,2.11e-07,2;CL:0000034,3.25e-07,441;CL:0000236,9.09e-07,14|ontology_enrichment_development_v019=CL:0000049;1.82e-09;108|ontology_enrichment_disease=DOID:1240!1.95e-10!39;DOID:8692!7.62e-10!31;DOID:2531!3.26e-07!51;DOID:0060083!3.26e-07!51|ontology_enrichment_disease_v019=DOID:1240;1.41e-15;39!DOID:8692;7.11e-15;31!DOID:2531;2.07e-09;51!DOID:0060083;2.07e-09;51|ontology_enrichment_disease_v019_2=DOID:1240,1.40e-17,39;DOID:8692,1.88e-15,31;DOID:2531,2.00e-12,51;DOID:0060083,2.00e-12,51|ontology_enrichment_uberon=UBERON:0002390!2.90e-15!102;UBERON:0003061!2.90e-15!102;UBERON:0007023!3.65e-14!115;UBERON:0002193!8.09e-14!112;UBERON:0002371!1.59e-13!80;UBERON:0001474!3.71e-12!86;UBERON:0002405!2.57e-10!115;UBERON:0004765!6.58e-09!101;UBERON:0001434!6.58e-09!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.56e-25,76;UBERON:0001474,6.60e-23,82;UBERON:0002405,7.55e-21,93;UBERON:0004765,3.41e-20,90;UBERON:0002390,2.20e-19,98;UBERON:0003061,2.20e-19,98;UBERON:0001434,2.04e-17,100;UBERON:0002193,7.24e-17,108;UBERON:0002384,5.94e-11,371;UBERON:0002204,1.45e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0.401088894940283,0,32.467743764789,20.4053009591957,23.6969522223452,0.872389432677388,1.88937971844405,0.485168122375632,0.464858073811369,0.411167888021826,0,0,0,0,0,0,0,1.31769637679823,0.272906150057846,2.69668181334102,0.306083892370903,0.962787081228281,1.27867425159808,0,0,0.426224750532694,0.580418477257168,1.13477044938228,0,0,0,0.434377689410233,0.605399502633369,0,0.316462387440884,1.05627643155971,0.212604299965044,0,0,0.300353785683013,0,0,0,0,0,2.18455444504853,0.889509253863555,2.56038133539904,2.00197993518006,1.72425731986345,2.64417949113945,5.72432252721218,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,3.11949279278486,0,0,0,1.15282187753108,0.520237390239513,1.64437904603676,0.829050053357545,0.579606171470105,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0.087834785693126,0.196468613246569,0,0,2.27183175558278,3.30846500868608,29.5166672351881,1.43094374583205,5.14795419702115,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.132529768321485,0.580969714347592,0.518305275076852,0,0.72995471815166,0,1.92972281457866,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,100.210321477571,51.2469340654931,93.6376322418988,0,0,0,0,0,0,167.998164122517,100.023021039025,4.97587477297853,4.61183850934277,6.56460653817176,0.253991577168676,4.20187268114105,3.51652341630141,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=822 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1474 | |||
|TSSclassifier=W | |||
|UniProt=E7ENU9 | |||
|association_with_transcript=7bp_to_ENST00000449030_5end | |||
|coexpression_cluster_id=C602 | |||
|description=CAGE_peak_4_at_CAPG_5end | |||
|id=chr2:85636928..85636947,- | |||
|ontology_enrichment_celltype=CL:0000037!1.78e-22!172;CL:0000566!1.78e-22!172;CL:0000763!2.44e-21!112;CL:0000049!2.44e-21!112;CL:0002032!9.23e-21!165;CL:0000837!9.23e-21!165;CL:0000988!1.36e-19!182;CL:0000557!1.96e-16!71;CL:0000738!3.19e-16!140;CL:0002031!9.86e-16!124;CL:0000839!2.66e-15!70;CL:0000766!5.13e-14!76;CL:0002009!3.35e-13!65;CL:0002087!3.38e-12!119;CL:0002194!8.29e-12!63;CL:0000576!8.29e-12!63;CL:0000040!8.29e-12!63;CL:0000559!8.29e-12!63;CL:0000840!2.08e-07!5;CL:0001029!2.08e-07!5;CL:0000451!3.71e-07!10;CL:0002274!8.78e-07!5;CL:0000457!8.78e-07!5;CL:0002191!8.78e-07!5;CL:0000097!8.78e-07!5;CL:0000831!8.78e-07!5;CL:0002028!8.78e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.78e-19;6!CL:0000840;1.20e-17;5!CL:0000451;4.45e-16;10!CL:0000097;7.02e-16;5!CL:0000990;1.63e-11;8!CL:0002619;2.17e-10;3!CL:0000766;4.16e-09;69!CL:0000763;4.56e-09;100!CL:0000784;5.29e-09;3!CL:0000738;6.37e-09;136!CL:0000163;1.27e-08;9!CL:0001014;2.11e-07;2!CL:0001016;2.11e-07;2!CL:0000236;2.54e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.92e-35,168;CL:0000763,7.34e-34,108;CL:0000049,7.34e-34,108;CL:0002032,8.62e-34,161;CL:0000837,8.62e-34,161;CL:0000988,1.07e-32,177;CL:0000557,9.57e-30,67;CL:0002031,2.62e-27,120;CL:0000738,6.55e-26,136;CL:0000839,1.27e-25,66;CL:0000766,6.70e-23,72;CL:0002009,1.73e-21,61;CL:0000235,1.76e-19,6;CL:0002194,2.90e-18,59;CL:0000576,2.90e-18,59;CL:0000040,2.90e-18,59;CL:0000559,2.90e-18,59;CL:0000840,1.27e-17,5;CL:0001029,1.27e-17,5;CL:0002087,2.06e-17,115;CL:0000451,4.65e-16,10;CL:0000097,6.54e-16,5;CL:0002028,6.54e-16,5;CL:0000990,1.70e-11,8;CL:0000134,2.09e-11,354;CL:0002320,6.12e-11,361;CL:0000219,1.15e-10,386;CL:0002619,2.18e-10,3;CL:0000784,5.23e-09,3;CL:0000163,1.22e-08,9;CL:0000048,7.39e-08,427;CL:0000723,1.41e-07,433;CL:0001014,2.11e-07,2;CL:0001016,2.11e-07,2;CL:0000034,3.25e-07,441;CL:0000236,9.09e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000049;1.82e-09;108 | |||
|ontology_enrichment_disease=DOID:1240!1.95e-10!39;DOID:8692!7.62e-10!31;DOID:2531!3.26e-07!51;DOID:0060083!3.26e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.41e-15;39!DOID:8692;7.11e-15;31!DOID:2531;2.07e-09;51!DOID:0060083;2.07e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.40e-17,39;DOID:8692,1.88e-15,31;DOID:2531,2.00e-12,51;DOID:0060083,2.00e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.90e-15!102;UBERON:0003061!2.90e-15!102;UBERON:0007023!3.65e-14!115;UBERON:0002193!8.09e-14!112;UBERON:0002371!1.59e-13!80;UBERON:0001474!3.71e-12!86;UBERON:0002405!2.57e-10!115;UBERON:0004765!6.58e-09!101;UBERON:0001434!6.58e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.56e-25,76;UBERON:0001474,6.60e-23,82;UBERON:0002405,7.55e-21,93;UBERON:0004765,3.41e-20,90;UBERON:0002390,2.20e-19,98;UBERON:0003061,2.20e-19,98;UBERON:0001434,2.04e-17,100;UBERON:0002193,7.24e-17,108;UBERON:0002384,5.94e-11,371;UBERON:0002204,1.45e-07,167 | |||
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| |||
|short_description=p4@CAPG | |||
}} |
Revision as of 19:59, 12 September 2013
Short description: | p4@CAPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CAPG_5end |
Coexpression cluster: | C602_Macrophage_Monocytederived_CD14_Mast_Dendritic_lung_adipose |
Association with transcript: | 7bp_to_ENST00000449030_5end |
EntrezGene: | CAPG |
HGNC: | 1474 |
UniProt: | E7ENU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.56e-25 | 76 |
bone element | 6.60e-23 | 82 |
immune system | 7.55e-21 | 93 |
skeletal element | 3.41e-20 | 90 |
hematopoietic system | 2.20e-19 | 98 |
blood island | 2.20e-19 | 98 |
skeletal system | 2.04e-17 | 100 |
hemolymphoid system | 7.24e-17 | 108 |
connective tissue | 5.94e-11 | 371 |
musculoskeletal system | 1.45e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.40e-17 | 39 |
myeloid leukemia | 1.88e-15 | 31 |
hematologic cancer | 2.00e-12 | 51 |
immune system cancer | 2.00e-12 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.