FFCP PHASE1:Hg19::chr2:85108416..85108456,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=129293|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27013|TSSclassifier=S|UniProt=Q86V40|association_with_transcript=-47bp_to_ENST00000335459_5end|coexpression_cluster_id=C18|description=CAGE_peak_2_at_C2orf89_5end|id=chr2:85108416..85108456,-|ontology_enrichment_celltype=CL:0000791!2.44e-13!18;CL:0000789!2.44e-13!18;CL:0002420!2.44e-13!18;CL:0002419!2.44e-13!18;CL:0000790!2.44e-13!18;CL:0000838!1.29e-09!52;CL:0000625!1.80e-09!11;CL:0000542!3.86e-09!53;CL:0000051!3.86e-09!53;CL:0000084!4.94e-09!25;CL:0000827!4.94e-09!25|ontology_enrichment_celltype_v019=CL:0000791;5.19e-21;18!CL:0000789;5.19e-21;18!CL:0002419;5.19e-21;18!CL:0000625;4.84e-15;11!CL:0000084;2.43e-13;25!CL:0000624;3.20e-09;6!CL:0000542;8.85e-08;53|ontology_enrichment_celltype_v019_2=CL:0000791,5.50e-21,18;CL:0000789,5.50e-21,18;CL:0002420,5.50e-21,18;CL:0002419,5.50e-21,18;CL:0000790,5.50e-21,18;CL:0000625,5.12e-15,11;CL:0000084,2.52e-13,25;CL:0000827,2.52e-13,25;CL:0000838,1.13e-12,52;CL:0000542,2.93e-12,53;CL:0000051,2.93e-12,53;CL:0000624,3.23e-09,6|ontology_enrichment_development_v019=CL:0000790;5.19e-21;18!CL:0000051;8.85e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.39e-09!15;UBERON:0000179!2.39e-09!15;UBERON:0000463!2.39e-09!15;UBERON:0001737!6.38e-07!9|ontology_enrichment_uberon_v019=UBERON:0000178;1.11e-11;15!UBERON:0000179;1.11e-11;15!UBERON:0000463;1.11e-11;15!UBERON:0001737;9.63e-11;9!UBERON:0001557;9.63e-11;9|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.12e-11,15;UBERON:0000179,1.12e-11,15;UBERON:0000463,1.12e-11,15;UBERON:0001737,1.08e-10,9;UBERON:0001557,2.41e-08,19|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,1.26343974685366,1.82829939739887,0.245733936501509,0,0,0,0.495065411840187,1.32558950291166,0.672325146451775,0,0.730310090387373,0.487932798790507,0.61560529038394,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.0764134057479513,0.246301768349837,0,0.393364276848904,0,0.464448369948228,0,0.30120591877825,0,0.232401601740905,0,0,2.76997704265939,2.80762226458198,4.99125002646459,0,0.971680998056939,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0.889509253863555,2.56038133539904,2.40237592221607,1.72425731986345,0.661044872784862,0.954053754535364,4.55370375287559,2.34894875748376,2.29363936875137,0,0,0,32.2604022986686,27.9037641551907,23.8497738839431,2.34061093546949,25.7478590640536,14.6768819777767,35.068811113424,1.44833593950726,5.30290633454707,4.43067789167242,1.35401931882508,0.896639238079726,1.56071217071854,2.79544437826249,4.42160028457357,6.66547097190621,57.5351865068794,52.9730839617632,59.5852485688368,3.17266159553185,16.0952607312807,14.0887252647878,12.9040042929946,19.751055688094,20.8346705234054,10.4549724889321,21.0805166708882,21.2457774516335,17.4903017173284,12.3124171062889,10.6746639599736,6.24980903996671,3.4767225451856,23.751202236779,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0,0.327447688744282,0.364295288292542,0.370784442784429,0,0.696518949197069,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.933633106199299,0.134710672069688,0.163461903113459,0,0,2.34321431833797,4.37024107562449,0.570471821544449,0.298897361103602,0.704606991862589,0.485618833104395,0.140450806702248,0.816616685019573,0.859840221182376,1.44656093646072,9.50402285825643,4.20353779773547,0.910161361938026,0,0.336672227908132,0.625592599359821,0.554128230968366,0.438977620880838,0.30648779579902,6.30999847407706,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.721367704669072,0,0.37223371266318,0.843881661206331,0,0.504867548488229,0.184099797284599,1.93975268182574,0,0.403008392910561,0.508681776931463,0,0,0,1.95157929807353,1.19276791489337,1.04574548582567,1.0366105501537,1.26160425437814,1.09493207722749,1.56449532329816,0,0,0,0,2.72105640091641,6.23763353288976,5.54325368732009,4.41175890929576,5.01122721412534,5.21995362044413,4.58426447744559,2.15843611637881,3.8474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.686271241194102,0.109750285408626,0,0,0.277765335475589,1.3032332212413,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0,0.383382679165211,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.387815147273333,7.15312891703765,1.690605505112,0,0,0.771622122786426,0,0,0.57191197463259,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0.112085143993527,7.09310736726938,6.4688272457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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=129293 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27013 | |||
|TSSclassifier=S | |||
|UniProt=Q86V40 | |||
|association_with_transcript=-47bp_to_ENST00000335459_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_C2orf89_5end | |||
|id=chr2:85108416..85108456,- | |||
|ontology_enrichment_celltype=CL:0000791!2.44e-13!18;CL:0000789!2.44e-13!18;CL:0002420!2.44e-13!18;CL:0002419!2.44e-13!18;CL:0000790!2.44e-13!18;CL:0000838!1.29e-09!52;CL:0000625!1.80e-09!11;CL:0000542!3.86e-09!53;CL:0000051!3.86e-09!53;CL:0000084!4.94e-09!25;CL:0000827!4.94e-09!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.19e-21;18!CL:0000789;5.19e-21;18!CL:0002419;5.19e-21;18!CL:0000625;4.84e-15;11!CL:0000084;2.43e-13;25!CL:0000624;3.20e-09;6!CL:0000542;8.85e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.50e-21,18;CL:0000789,5.50e-21,18;CL:0002420,5.50e-21,18;CL:0002419,5.50e-21,18;CL:0000790,5.50e-21,18;CL:0000625,5.12e-15,11;CL:0000084,2.52e-13,25;CL:0000827,2.52e-13,25;CL:0000838,1.13e-12,52;CL:0000542,2.93e-12,53;CL:0000051,2.93e-12,53;CL:0000624,3.23e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000790;5.19e-21;18!CL:0000051;8.85e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.39e-09!15;UBERON:0000179!2.39e-09!15;UBERON:0000463!2.39e-09!15;UBERON:0001737!6.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.11e-11;15!UBERON:0000179;1.11e-11;15!UBERON:0000463;1.11e-11;15!UBERON:0001737;9.63e-11;9!UBERON:0001557;9.63e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.12e-11,15;UBERON:0000179,1.12e-11,15;UBERON:0000463,1.12e-11,15;UBERON:0001737,1.08e-10,9;UBERON:0001557,2.41e-08,19 | |||
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| |||
|short_description=p2@C2orf89 | |||
}} |
Revision as of 19:57, 12 September 2013
Short description: | p2@C2orf89 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C2orf89_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -47bp_to_ENST00000335459_5end |
EntrezGene: | C2orf89 |
HGNC: | 27013 |
UniProt: | Q86V40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.50e-21 | 18 |
alpha-beta T cell | 5.50e-21 | 18 |
immature T cell | 5.50e-21 | 18 |
mature T cell | 5.50e-21 | 18 |
immature alpha-beta T cell | 5.50e-21 | 18 |
CD8-positive, alpha-beta T cell | 5.12e-15 | 11 |
T cell | 2.52e-13 | 25 |
pro-T cell | 2.52e-13 | 25 |
lymphoid lineage restricted progenitor cell | 1.13e-12 | 52 |
lymphocyte | 2.93e-12 | 53 |
common lymphoid progenitor | 2.93e-12 | 53 |
CD4-positive, alpha-beta T cell | 3.23e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 1.12e-11 | 15 |
haemolymphatic fluid | 1.12e-11 | 15 |
organism substance | 1.12e-11 | 15 |
larynx | 1.08e-10 | 9 |
upper respiratory tract | 2.41e-08 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.