FFCP PHASE1:Hg19::chr2:55237340..55237419,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14085 | |||
|TSSclassifier=W | |||
|UniProt=Q7L7Q5,Q9NQC3 | |||
|association_with_transcript=50bp_to_NM_007008,uc002ryc.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_RTN4_5end | |||
|id=chr2:55237340..55237419,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.31e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.91e-48!115;UBERON:0001049!3.57e-23!57;UBERON:0005068!3.57e-23!57;UBERON:0006241!3.57e-23!57;UBERON:0007135!3.57e-23!57;UBERON:0003080!8.62e-20!42;UBERON:0002780!2.12e-19!41;UBERON:0001890!2.12e-19!41;UBERON:0006240!2.12e-19!41;UBERON:0002616!5.89e-18!59;UBERON:0000955!2.30e-16!69;UBERON:0006238!2.30e-16!69;UBERON:0001017!1.35e-15!82;UBERON:0002020!1.88e-15!34;UBERON:0003528!1.88e-15!34;UBERON:0005743!1.98e-15!86;UBERON:0001893!2.13e-15!34;UBERON:0002791!9.05e-15!33;UBERON:0001869!1.37e-14!32;UBERON:0002346!1.62e-13!90;UBERON:0003075!1.98e-13!86;UBERON:0007284!1.98e-13!86;UBERON:0000073!3.08e-13!94;UBERON:0001016!3.08e-13!94;UBERON:0002619!7.33e-13!22;UBERON:0001950!1.10e-11!20;UBERON:0000956!2.10e-10!25;UBERON:0000203!2.10e-10!25;UBERON:0003056!2.15e-10!61;UBERON:0000153!1.51e-08!129;UBERON:0007811!1.51e-08!129;UBERON:0000033!2.23e-07!123;UBERON:0002420!6.18e-07!9;UBERON:0007245!6.18e-07!9;UBERON:0010009!6.18e-07!9;UBERON:0010011!6.18e-07!9;UBERON:0000454!6.18e-07!9;UBERON:0002308!9.64e-07!9;UBERON:0000125!9.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.11e-15;41!UBERON:0001890;1.11e-15;41!UBERON:0001893;7.63e-15;34!UBERON:0007023;1.48e-14;114!UBERON:0001869;1.68e-14;32!UBERON:0003528;1.98e-14;34!UBERON:0002020;1.98e-14;34!UBERON:0002791;2.79e-14;32!UBERON:0002619;5.61e-14;22!UBERON:0000073;5.79e-14;53!UBERON:0002616;5.79e-14;53!UBERON:0001950;1.34e-12;20!UBERON:0000956;4.02e-11;25!UBERON:0000203;4.02e-11;25!UBERON:0001017;8.57e-10;75!UBERON:0000955;2.21e-09;68!UBERON:0002420;6.62e-08;9!UBERON:0007245;6.62e-08;9!UBERON:0010009;6.62e-08;9!UBERON:0010011;6.62e-08;9!UBERON:0000454;6.62e-08;9!UBERON:0000125;1.12e-07;9!UBERON:0002308;1.12e-07;9!UBERON:0001016;1.47e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.34e-56,114;UBERON:0001049,1.29e-26,56;UBERON:0005068,1.29e-26,56;UBERON:0006241,1.29e-26,56;UBERON:0007135,1.29e-26,56;UBERON:0000073,7.91e-25,53;UBERON:0002616,7.91e-25,53;UBERON:0002780,1.07e-21,41;UBERON:0001890,1.07e-21,41;UBERON:0003080,1.07e-21,41;UBERON:0006240,1.07e-21,41;UBERON:0000955,8.85e-19,68;UBERON:0006238,8.85e-19,68;UBERON:0001017,5.71e-18,81;UBERON:0003528,4.49e-17,34;UBERON:0002020,4.49e-17,34;UBERON:0001893,5.18e-17,34;UBERON:0001869,4.64e-16,32;UBERON:0002791,9.01e-16,32;UBERON:0001016,1.09e-14,89;UBERON:0002346,1.25e-14,86;UBERON:0003075,1.58e-14,82;UBERON:0007284,1.58e-14,82;UBERON:0002619,4.62e-14,22;UBERON:0001950,1.10e-12,20;UBERON:0000956,3.41e-11,25;UBERON:0000203,3.41e-11,25;UBERON:0003056,3.46e-11,61;UBERON:0010371,2.13e-10,104;UBERON:0011216,2.59e-08,223;UBERON:0002420,6.74e-08,9;UBERON:0007245,6.74e-08,9;UBERON:0010009,6.74e-08,9;UBERON:0010011,6.74e-08,9;UBERON:0000454,6.74e-08,9;UBERON:0000125,1.14e-07,9;UBERON:0002308,1.14e-07,9;UBERON:0004121,8.97e-07,171;UBERON:0000924,8.97e-07,171;UBERON:0006601,8.97e-07,171 | |||
|phase1_expression=1.2717486548939,29.1176712491737,13.5316227932132,8.00586386825043,22.7950158157917,2.61701557230111,2.53299878168311,2.52687949370732,15.1487664355906,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,2.13957536094264,1.72411237844886,1.33808328233255,6.29382842958246,6.52509976765262,5.88301268601089,1.83884244895785,0,1.84877005083394,0,0,1.76160263600908,3.32397245119126,1.40381113229099,2.82114131930607,33.1394901875088,28.1787489436512,35.2878527658836,2.32637182047304,1.88937971844405,0.727752183563449,1.85943229524548,0,3.40677007984614,3.16461631554365,2.0492856522328,1.6553756092201,1.72372840368309,0.645484683583826,0,2.07066573496865,1.36453075028923,0.898893937780338,2.14258724659632,1.92557416245656,1.91801137739712,2.30895910130701,2.19410023383795,1.27867425159808,1.7412554317715,0.56738522469114,0,2.26123798731069,2.60741459210101,2.17188844705117,4.23779651843358,1.10483290796269,0.632924774881769,1.26753171787165,1.70083439972035,2.09658645508376,0.112328631146495,0.150176892841506,0.64290234678832,0.570025487482497,0.79566670879636,1.82664153764634,0,0,0.889509253863555,1.70692089026603,1.20118796110804,1.72425731986345,0,1.90810750907073,1.1384259382189,0.587237189370939,0,1.32171328579026,5.04457706683382,5.53106578027662,13.3762643677406,10.2182798314783,8.42966145897988,10.1983762188314,14.6665019985116,25.5661815096756,25.3274746930285,44.5641827540694,29.7551966549586,23.2610589312802,28.4344056953266,9.99112293860266,11.0550445425897,5.91976456573234,8.5668505513613,8.40428948631652,15.7183756951784,20.8681845909976,16.7256838087963,5.09892042139048,8.43085085924227,19.5867643925099,17.7113784413652,9.5569624297229,3.25541726928209,6.65316431113862,2.10805166708882,2.17577238962511,6.24653632761729,5.91943130110042,7.39015197228942,7.4594494993151,3.20928234940209,4.92402973201517,2.43806866313962,0,0.255725123687061,1.0843174571537,0,0.724232594804119,0.795285947051099,0,0,0.443458794925128,0.263504357079378,73.1518136654725,0.364295288292542,0.370784442784429,1.9472843619281,2.26368658489047,2.12732736830184,2.8618874916641,4.57595928624102,3.71457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,2.63560834872127,0,0.872188104285069,0.993943903390637,0,0.132409180813219,0,0.709336764396714,0,0,0,0.622422070799533,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0.45071417671979,0,0.179389635688862,0.640672166455702,1.27159140695737,0,0.412210116953756,1.03056216018252,0.558350568994769,2.19409231913646,1.55899208257918,0.504867548488229,0.368199594569197,0.646584227275248,3.19508633264953,0.906768884048762,0.508681776931463,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0.928735856063958,1.44375896333917,0.946454400318751,0.674338760312407,1.44606617930089,1.21323370005633,1.74303555273925,1.66089433377768,0.808987848960987,1.37355025587742,0.38474715694639,0,0,0.4115740113314,0,398.010809340549,126.784710951414,223.318584725571,0.441463099414651,6.88735255841436,0,0.109750285408626,0,0.201057944823262,3.61094936118265,0,0,0,1.15930404975077,0,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,1.71697232418975,20.6822285113414,2.10603838625314,2.52672975890838,0,0.16798212819886,0.141775097242386,3.40322386270824,4.94077695473735,0,5.91195885475132,11.2701995536929,6.84182781284548,8.79131715843465,6.43836410474538,1.33345578013555,0,0,1.71072446022705,1.64523988325318,2.40274446275134,6.28818151787272,0,0,0,0,0,0,0,3.12022310734098,0,0,0,0.714889968290738,0,0,0,0.355391948742546,0,1.20575750823834,1.74306691720059,0.199945982364114,13.378615870531,28.1263971201991,10.5416969741516,0,0,0,0.434343920002738,0.61642896765115,0.537182889719687,0.784596007954691,13.2010609335291,5.82194452120697,7.44389610422541,2.28685161800217,1.30139853857622,0.773288812777695,0.502548796003046,0,2.99602809578873,2.99161459204025,1.24324654030811,0.36807447515742,0,0,0,0.713715955188647,0.473107245101804,0.35142424497814,0.300946099727719,0,0,0,0,0.955719759148911,0.195801157462741,0,4.9624326269493,4.52999821719095,3.842192080924,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0.512556597022804,1.53512174720011,0.804269605718038,0,0,0,0.9033987161519,0,1.16210378459959,0.604297247958111,1.60405176242628,2.5782676902051,0,0,0.131124414959424,0.451199612907412,0.385076685522074,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,1.5686127061494,1.79515087581472,0,0.976135183992909,173.418022603117,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0.435050081742686,0.0852266274161009,8.19094727949984,0.165284915360978,0.384380134730212,0.382838137483752,0.30347334256665,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0.316379424718726,0.38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| |||
|short_description=p4@RTN4 | |||
}} |
Revision as of 19:01, 12 September 2013
Short description: | p4@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RTN4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 50bp_to_NM_007008, uc002ryc.2_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | Q7L7Q5Q9NQC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
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