FFCP PHASE1:Hg19::chr2:42180940..42180951,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=400950|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=Q6ZV80|association_with_transcript=0bp_to_ENST00000378711,NM_001242815,uc002rsf.1_5end|coexpression_cluster_id=C15|description=CAGE_peak_1_at_LOC400950_5end|id=chr2:42180940..42180951,-|ontology_enrichment_celltype=CL:0000167!1.74e-09!1;CL:0000164!1.74e-09!1;CL:0000502!1.74e-09!1;CL:0000172!1.74e-09!1;CL:0000173!1.74e-09!1;CL:0002351!1.74e-09!1;CL:0000946!3.05e-09!1;CL:0000786!3.05e-09!1;CL:0000980!3.05e-09!1;CL:0000945!5.98e-08!24;CL:0000826!5.98e-08!24|ontology_enrichment_celltype_v019=CL:0000167;3.99e-50;1!CL:0000164;3.99e-50;1!CL:0000502;3.99e-50;1!CL:0000172;3.99e-50;1!CL:0000173;3.99e-50;1!CL:0000150;8.37e-07;9!CL:0000163;8.37e-07;9|ontology_enrichment_celltype_v019_2=CL:0000167,2.42e-50,1;CL:0000164,2.42e-50,1;CL:0000502,2.42e-50,1;CL:0000172,2.42e-50,1;CL:0000173,2.42e-50,1;CL:0002351,2.42e-50,1;CL:0000150,7.91e-07,9;CL:0000163,7.91e-07,9|ontology_enrichment_development_v019=CL:0002351;3.99e-50;1|ontology_enrichment_disease=DOID:4430!1.74e-09!1;DOID:630!2.04e-09!1;DOID:0050177!2.04e-09!1;DOID:0050427!2.04e-09!1;DOID:2355!4.54e-09!1|ontology_enrichment_disease_v019=DOID:630;3.99e-50;1!DOID:0050177;3.99e-50;1!DOID:0050427;3.99e-50;1!DOID:4430;3.99e-50;1!DOID:169;1.44e-09;6|ontology_enrichment_disease_v019_2=DOID:4430,2.42e-50,1;DOID:630,6.58e-50,1;DOID:0050177,6.58e-50,1;DOID:0050427,6.58e-50,1;DOID:169,1.32e-09,6|ontology_enrichment_uberon=UBERON:0002298!7.56e-24!8;UBERON:0006331!2.38e-11!3;UBERON:0000988!3.42e-11!3;UBERON:0002616!4.44e-11!59;UBERON:0001896!4.90e-11!3;UBERON:0005290!4.90e-11!3;UBERON:0010096!4.90e-11!3;UBERON:0004733!2.34e-10!12;UBERON:0002028!2.34e-10!12;UBERON:0007277!2.34e-10!12;UBERON:0004732!1.42e-09!13;UBERON:0002038!2.40e-09!1;UBERON:0009661!2.40e-09!1;UBERON:0001736!2.60e-09!1;UBERON:0006298!2.60e-09!1;UBERON:0001049!2.95e-09!57;UBERON:0005068!2.95e-09!57;UBERON:0006241!2.95e-09!57;UBERON:0007135!2.95e-09!57;UBERON:0000955!4.08e-09!69;UBERON:0006238!4.08e-09!69;UBERON:0002336!5.75e-09!1;UBERON:0001018!5.75e-09!1;UBERON:0002473!5.75e-09!1;UBERON:0005340!5.75e-09!1;UBERON:0002316!5.75e-09!1;UBERON:0003544!5.75e-09!1;UBERON:0001020!5.75e-09!1;UBERON:0005970!5.75e-09!1;UBERON:0002437!5.75e-09!1;UBERON:0007023!8.46e-09!115;UBERON:0002372!9.91e-09!1;UBERON:0001961!9.91e-09!1;UBERON:0001744!9.91e-09!1;UBERON:0001735!9.91e-09!1;UBERON:0002581!1.07e-08!1;UBERON:0003076!2.57e-08!15;UBERON:0003057!2.57e-08!15;UBERON:0002308!2.70e-08!9;UBERON:0000125!2.70e-08!9;UBERON:0001017!1.84e-07!82;UBERON:0005743!4.74e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2452736714236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,1.3948971044175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88541237681301,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.573358332605805,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293|short_description=p1@LOC400950}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=400950 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=Q6ZV80 | |||
|association_with_transcript=0bp_to_ENST00000378711,NM_001242815,uc002rsf.1_5end | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_1_at_LOC400950_5end | |||
|id=chr2:42180940..42180951,- | |||
|ontology_enrichment_celltype=CL:0000167!1.74e-09!1;CL:0000164!1.74e-09!1;CL:0000502!1.74e-09!1;CL:0000172!1.74e-09!1;CL:0000173!1.74e-09!1;CL:0002351!1.74e-09!1;CL:0000946!3.05e-09!1;CL:0000786!3.05e-09!1;CL:0000980!3.05e-09!1;CL:0000945!5.98e-08!24;CL:0000826!5.98e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.99e-50;1!CL:0000164;3.99e-50;1!CL:0000502;3.99e-50;1!CL:0000172;3.99e-50;1!CL:0000173;3.99e-50;1!CL:0000150;8.37e-07;9!CL:0000163;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.42e-50,1;CL:0000164,2.42e-50,1;CL:0000502,2.42e-50,1;CL:0000172,2.42e-50,1;CL:0000173,2.42e-50,1;CL:0002351,2.42e-50,1;CL:0000150,7.91e-07,9;CL:0000163,7.91e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002351;3.99e-50;1 | |||
|ontology_enrichment_disease=DOID:4430!1.74e-09!1;DOID:630!2.04e-09!1;DOID:0050177!2.04e-09!1;DOID:0050427!2.04e-09!1;DOID:2355!4.54e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:630;3.99e-50;1!DOID:0050177;3.99e-50;1!DOID:0050427;3.99e-50;1!DOID:4430;3.99e-50;1!DOID:169;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.42e-50,1;DOID:630,6.58e-50,1;DOID:0050177,6.58e-50,1;DOID:0050427,6.58e-50,1;DOID:169,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002298!7.56e-24!8;UBERON:0006331!2.38e-11!3;UBERON:0000988!3.42e-11!3;UBERON:0002616!4.44e-11!59;UBERON:0001896!4.90e-11!3;UBERON:0005290!4.90e-11!3;UBERON:0010096!4.90e-11!3;UBERON:0004733!2.34e-10!12;UBERON:0002028!2.34e-10!12;UBERON:0007277!2.34e-10!12;UBERON:0004732!1.42e-09!13;UBERON:0002038!2.40e-09!1;UBERON:0009661!2.40e-09!1;UBERON:0001736!2.60e-09!1;UBERON:0006298!2.60e-09!1;UBERON:0001049!2.95e-09!57;UBERON:0005068!2.95e-09!57;UBERON:0006241!2.95e-09!57;UBERON:0007135!2.95e-09!57;UBERON:0000955!4.08e-09!69;UBERON:0006238!4.08e-09!69;UBERON:0002336!5.75e-09!1;UBERON:0001018!5.75e-09!1;UBERON:0002473!5.75e-09!1;UBERON:0005340!5.75e-09!1;UBERON:0002316!5.75e-09!1;UBERON:0003544!5.75e-09!1;UBERON:0001020!5.75e-09!1;UBERON:0005970!5.75e-09!1;UBERON:0002437!5.75e-09!1;UBERON:0007023!8.46e-09!115;UBERON:0002372!9.91e-09!1;UBERON:0001961!9.91e-09!1;UBERON:0001744!9.91e-09!1;UBERON:0001735!9.91e-09!1;UBERON:0002581!1.07e-08!1;UBERON:0003076!2.57e-08!15;UBERON:0003057!2.57e-08!15;UBERON:0002308!2.70e-08!9;UBERON:0000125!2.70e-08!9;UBERON:0001017!1.84e-07!82;UBERON:0005743!4.74e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2452736714236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,1.3948971044175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88541237681301,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.573358332605805,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |||
|short_description=p1@LOC400950 | |||
}} |
Revision as of 18:37, 12 September 2013
Short description: | p1@LOC400950 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC400950_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 0bp_to_ENST00000378711, NM_001242815, uc002rsf.1_5end |
EntrezGene: | LOC400950 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.42e-50 | 1 |
enteroendocrine cell | 2.42e-50 | 1 |
type D enteroendocrine cell | 2.42e-50 | 1 |
somatostatin secreting cell | 2.42e-50 | 1 |
pancreatic D cell | 2.42e-50 | 1 |
progenitor cell of endocrine pancreas | 2.42e-50 | 1 |
glandular epithelial cell | 7.91e-07 | 9 |
endocrine cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.42e-50 | 1 |
genetic disease | 6.58e-50 | 1 |
monogenic disease | 6.58e-50 | 1 |
xeroderma pigmentosum | 6.58e-50 | 1 |
neuroendocrine tumor | 1.32e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.