FFCP PHASE1:Hg19::chr2:38358217..38358244,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285154|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=28543|TSSclassifier=S|UniProt=|association_with_transcript=-2bp_to_ENST00000413828,NR_027252,uc010faj.1_5end|coexpression_cluster_id=C26|description=CAGE_peak_1_at_CYP1B1-AS1_5end|id=chr2:38358217..38358244,+|ontology_enrichment_celltype=CL:0002194!1.88e-75!63;CL:0000576!1.88e-75!63;CL:0000040!1.88e-75!63;CL:0000559!1.88e-75!63;CL:0002057!1.19e-72!42;CL:0002009!1.27e-72!65;CL:0000766!1.31e-67!76;CL:0000860!7.76e-67!45;CL:0000839!3.03e-66!70;CL:0000557!4.46e-65!71;CL:0002087!6.92e-48!119;CL:0000763!7.59e-47!112;CL:0000049!7.59e-47!112;CL:0000738!1.22e-42!140;CL:0002031!4.46e-40!124;CL:0000037!6.77e-36!172;CL:0000566!6.77e-36!172;CL:0002032!4.12e-34!165;CL:0000837!4.12e-34!165;CL:0000988!8.49e-33!182;CL:0002393!3.48e-16!9;CL:0002397!3.48e-16!9;CL:0000134!2.83e-09!358;CL:0002320!9.39e-09!365;CL:0000219!2.36e-07!390|ontology_enrichment_celltype_v019=CL:0000860;2.14e-91;33!CL:0002057;2.14e-91;33!CL:0000473;1.85e-85;39!CL:0000234;1.85e-85;39!CL:0000576;1.02e-80;48!CL:0000766;1.28e-55;69!CL:0000763;7.58e-26;100!CL:0002393;2.60e-19;6!CL:0002397;2.60e-19;6!CL:0002087;4.52e-19;104!CL:0000738;6.43e-16;136!CL:0000235;8.74e-14;6!CL:0000988;2.66e-10;177!CL:0000767;4.88e-10;3!CL:0000875;9.06e-10;3!CL:0002619;9.06e-10;3!CL:0002396;9.06e-10;3!CL:0000219;7.11e-07;193|ontology_enrichment_celltype_v019_2=CL:0000473,6.50e-141,48;CL:0000234,6.50e-141,48;CL:0002194,5.87e-136,59;CL:0000576,5.87e-136,59;CL:0000040,5.87e-136,59;CL:0000559,5.87e-136,59;CL:0002009,3.39e-131,61;CL:0000860,3.17e-128,42;CL:0002057,3.17e-128,42;CL:0000766,1.64e-123,72;CL:0000839,1.56e-120,66;CL:0000557,1.37e-118,67;CL:0000763,7.19e-82,108;CL:0000049,7.19e-82,108;CL:0002087,2.47e-70,115;CL:0000738,2.59e-65,136;CL:0002031,1.70e-61,120;CL:0000037,1.05e-52,168;CL:0002032,4.01e-51,161;CL:0000837,4.01e-51,161;CL:0000988,2.03e-49,177;CL:0002393,2.18e-27,9;CL:0002397,2.18e-27,9;CL:0000134,1.36e-18,354;CL:0002320,5.44e-18,361;CL:0000219,7.16e-16,386;CL:0000235,1.13e-13,6;CL:0000048,2.80e-13,427;CL:0000723,6.38e-13,433;CL:0000034,1.85e-12,441;CL:0000767,5.37e-10,3;CL:0000875,8.12e-10,3;CL:0002396,8.12e-10,3;CL:0002619,1.01e-09,3|ontology_enrichment_development_v019=CL:0002057;1.36e-90;42!CL:0000049;3.95e-23;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.97e-71!102;UBERON:0003061!9.97e-71!102;UBERON:0002193!1.39e-62!112;UBERON:0002371!7.16e-56!80;UBERON:0001474!9.87e-55!86;UBERON:0004765!8.27e-46!101;UBERON:0001434!8.27e-46!101;UBERON:0002405!1.42e-44!115;UBERON:0003081!1.17e-24!216;UBERON:0002204!6.87e-22!167;UBERON:0001869!3.52e-11!32;UBERON:0002619!1.87e-10!22;UBERON:0001893!2.76e-10!34;UBERON:0000178!3.84e-10!15;UBERON:0000179!3.84e-10!15;UBERON:0000463!3.84e-10!15;UBERON:0001950!4.57e-10!20;UBERON:0007023!6.90e-10!115;UBERON:0002791!1.96e-09!33;UBERON:0002020!4.76e-09!34;UBERON:0003528!4.76e-09!34;UBERON:0002780!6.09e-09!41;UBERON:0001890!6.09e-09!41;UBERON:0006240!6.09e-09!41;UBERON:0000956!7.16e-09!25;UBERON:0000203!7.16e-09!25;UBERON:0003080!1.25e-08!42;UBERON:0002384!4.73e-08!375;UBERON:0000062!7.73e-08!511;UBERON:0000923!7.77e-08!604;UBERON:0005291!7.77e-08!604;UBERON:0006598!7.77e-08!604;UBERON:0002532!7.77e-08!604;UBERON:0002050!8.81e-08!605;UBERON:0005423!8.81e-08!605;UBERON:0000926!1.15e-07!448;UBERON:0004120!1.15e-07!448;UBERON:0006603!1.15e-07!448;UBERON:0000922!2.08e-07!612;UBERON:0001871!6.48e-07!7;UBERON:0000467!9.74e-07!625|ontology_enrichment_uberon_v019=UBERON:0000178;4.68e-09;15!UBERON:0000179;4.68e-09;15!UBERON:0000463;4.68e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.33e-103,76;UBERON:0002390,4.00e-102,98;UBERON:0003061,4.00e-102,98;UBERON:0001474,4.86e-95,82;UBERON:0002193,1.22e-91,108;UBERON:0004765,1.19e-85,90;UBERON:0002405,1.52e-82,93;UBERON:0001434,5.23e-76,100;UBERON:0003081,3.01e-43,203;UBERON:0002204,5.50e-41,167;UBERON:0000926,1.65e-23,315;UBERON:0004120,1.65e-23,315;UBERON:0006603,1.65e-23,315;UBERON:0002384,3.60e-17,371;UBERON:0000178,4.47e-09,15;UBERON:0000179,4.47e-09,15;UBERON:0000463,4.47e-09,15;UBERON:0000923,1.49e-07,560;UBERON:0010316,1.49e-07,560;UBERON:0005291,1.49e-07,560;UBERON:0006598,1.49e-07,560;UBERON:0010317,1.49e-07,560;UBERON:0002532,1.49e-07,560;UBERON:0002050,2.08e-07,564;UBERON:0005423,8.05e-07,581|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,2.30297638858328,3.09632246632152,0,0,0,0,0,0,3.32397245119126,3.00816671205213,4.34021741431704,1.56740831967947,2.59114932815184,1.03030227053675,6.68831898385998,6.42389104270976,5.09426528494414,7.43772918098191,7.40102198439286,6.50383378879718,5.17846306179871,6.66017836975662,6.14853797710322,6.20542225325913,3.22742341791913,0,4.89430082810772,10.0975275521403,8.53949240891322,3.06083892370903,8.02322567690234,4.47535988059329,7.58657990429447,7.38015533200038,1.70489900213078,4.35313857942876,3.40431134814684,4.9825779919646,6.28121663141858,5.73631210262222,8.25317609879443,3.63239701580021,5.15588690382591,6.0127853613768,2.95757400836718,3.4016687994407,5.03180749220102,11.9068349015285,9.76149803469791,6.75047464127737,1.99508920618874,1.59133341759272,2.00930569141097,0,0,0,0,0.800791974072025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62273696827342,0.870648686496336,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21595305478658,3.04205544681009,2.0808362720422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,12.162378064119,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0.336255431980582,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,2.5885704098234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,2.27858874869665,0.476463550915578,0,1.94541993357815,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,1.17232857241224,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0.319267718114302,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.620060389503552,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328863867814245,0,0,0.078493092850514,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751871343838829,0.45120521581504,0.0999411559249289,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0,0,0.124149428591716,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@CYP1B1-AS1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=285154 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=28543 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_ENST00000413828,NR_027252,uc010faj.1_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_CYP1B1-AS1_5end | |||
|id=chr2:38358217..38358244,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.88e-75!63;CL:0000576!1.88e-75!63;CL:0000040!1.88e-75!63;CL:0000559!1.88e-75!63;CL:0002057!1.19e-72!42;CL:0002009!1.27e-72!65;CL:0000766!1.31e-67!76;CL:0000860!7.76e-67!45;CL:0000839!3.03e-66!70;CL:0000557!4.46e-65!71;CL:0002087!6.92e-48!119;CL:0000763!7.59e-47!112;CL:0000049!7.59e-47!112;CL:0000738!1.22e-42!140;CL:0002031!4.46e-40!124;CL:0000037!6.77e-36!172;CL:0000566!6.77e-36!172;CL:0002032!4.12e-34!165;CL:0000837!4.12e-34!165;CL:0000988!8.49e-33!182;CL:0002393!3.48e-16!9;CL:0002397!3.48e-16!9;CL:0000134!2.83e-09!358;CL:0002320!9.39e-09!365;CL:0000219!2.36e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.14e-91;33!CL:0002057;2.14e-91;33!CL:0000473;1.85e-85;39!CL:0000234;1.85e-85;39!CL:0000576;1.02e-80;48!CL:0000766;1.28e-55;69!CL:0000763;7.58e-26;100!CL:0002393;2.60e-19;6!CL:0002397;2.60e-19;6!CL:0002087;4.52e-19;104!CL:0000738;6.43e-16;136!CL:0000235;8.74e-14;6!CL:0000988;2.66e-10;177!CL:0000767;4.88e-10;3!CL:0000875;9.06e-10;3!CL:0002619;9.06e-10;3!CL:0002396;9.06e-10;3!CL:0000219;7.11e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.50e-141,48;CL:0000234,6.50e-141,48;CL:0002194,5.87e-136,59;CL:0000576,5.87e-136,59;CL:0000040,5.87e-136,59;CL:0000559,5.87e-136,59;CL:0002009,3.39e-131,61;CL:0000860,3.17e-128,42;CL:0002057,3.17e-128,42;CL:0000766,1.64e-123,72;CL:0000839,1.56e-120,66;CL:0000557,1.37e-118,67;CL:0000763,7.19e-82,108;CL:0000049,7.19e-82,108;CL:0002087,2.47e-70,115;CL:0000738,2.59e-65,136;CL:0002031,1.70e-61,120;CL:0000037,1.05e-52,168;CL:0002032,4.01e-51,161;CL:0000837,4.01e-51,161;CL:0000988,2.03e-49,177;CL:0002393,2.18e-27,9;CL:0002397,2.18e-27,9;CL:0000134,1.36e-18,354;CL:0002320,5.44e-18,361;CL:0000219,7.16e-16,386;CL:0000235,1.13e-13,6;CL:0000048,2.80e-13,427;CL:0000723,6.38e-13,433;CL:0000034,1.85e-12,441;CL:0000767,5.37e-10,3;CL:0000875,8.12e-10,3;CL:0002396,8.12e-10,3;CL:0002619,1.01e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.36e-90;42!CL:0000049;3.95e-23;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.97e-71!102;UBERON:0003061!9.97e-71!102;UBERON:0002193!1.39e-62!112;UBERON:0002371!7.16e-56!80;UBERON:0001474!9.87e-55!86;UBERON:0004765!8.27e-46!101;UBERON:0001434!8.27e-46!101;UBERON:0002405!1.42e-44!115;UBERON:0003081!1.17e-24!216;UBERON:0002204!6.87e-22!167;UBERON:0001869!3.52e-11!32;UBERON:0002619!1.87e-10!22;UBERON:0001893!2.76e-10!34;UBERON:0000178!3.84e-10!15;UBERON:0000179!3.84e-10!15;UBERON:0000463!3.84e-10!15;UBERON:0001950!4.57e-10!20;UBERON:0007023!6.90e-10!115;UBERON:0002791!1.96e-09!33;UBERON:0002020!4.76e-09!34;UBERON:0003528!4.76e-09!34;UBERON:0002780!6.09e-09!41;UBERON:0001890!6.09e-09!41;UBERON:0006240!6.09e-09!41;UBERON:0000956!7.16e-09!25;UBERON:0000203!7.16e-09!25;UBERON:0003080!1.25e-08!42;UBERON:0002384!4.73e-08!375;UBERON:0000062!7.73e-08!511;UBERON:0000923!7.77e-08!604;UBERON:0005291!7.77e-08!604;UBERON:0006598!7.77e-08!604;UBERON:0002532!7.77e-08!604;UBERON:0002050!8.81e-08!605;UBERON:0005423!8.81e-08!605;UBERON:0000926!1.15e-07!448;UBERON:0004120!1.15e-07!448;UBERON:0006603!1.15e-07!448;UBERON:0000922!2.08e-07!612;UBERON:0001871!6.48e-07!7;UBERON:0000467!9.74e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.68e-09;15!UBERON:0000179;4.68e-09;15!UBERON:0000463;4.68e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.33e-103,76;UBERON:0002390,4.00e-102,98;UBERON:0003061,4.00e-102,98;UBERON:0001474,4.86e-95,82;UBERON:0002193,1.22e-91,108;UBERON:0004765,1.19e-85,90;UBERON:0002405,1.52e-82,93;UBERON:0001434,5.23e-76,100;UBERON:0003081,3.01e-43,203;UBERON:0002204,5.50e-41,167;UBERON:0000926,1.65e-23,315;UBERON:0004120,1.65e-23,315;UBERON:0006603,1.65e-23,315;UBERON:0002384,3.60e-17,371;UBERON:0000178,4.47e-09,15;UBERON:0000179,4.47e-09,15;UBERON:0000463,4.47e-09,15;UBERON:0000923,1.49e-07,560;UBERON:0010316,1.49e-07,560;UBERON:0005291,1.49e-07,560;UBERON:0006598,1.49e-07,560;UBERON:0010317,1.49e-07,560;UBERON:0002532,1.49e-07,560;UBERON:0002050,2.08e-07,564;UBERON:0005423,8.05e-07,581 | |||
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|short_description=p1@CYP1B1-AS1 | |||
}} |
Revision as of 18:31, 12 September 2013
Short description: | p1@CYP1B1-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CYP1B1-AS1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -2bp_to_ENST00000413828, NR_027252, uc010faj.1_5end |
EntrezGene: | CYP1B1-AS1 |
HGNC: | 28543 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.33e-103 | 76 |
hematopoietic system | 4.00e-102 | 98 |
blood island | 4.00e-102 | 98 |
bone element | 4.86e-95 | 82 |
hemolymphoid system | 1.22e-91 | 108 |
skeletal element | 1.19e-85 | 90 |
immune system | 1.52e-82 | 93 |
skeletal system | 5.23e-76 | 100 |
lateral plate mesoderm | 3.01e-43 | 203 |
musculoskeletal system | 5.50e-41 | 167 |
mesoderm | 1.65e-23 | 315 |
mesoderm-derived structure | 1.65e-23 | 315 |
presumptive mesoderm | 1.65e-23 | 315 |
connective tissue | 3.60e-17 | 371 |
blood | 4.47e-09 | 15 |
haemolymphatic fluid | 4.47e-09 | 15 |
organism substance | 4.47e-09 | 15 |
germ layer | 1.49e-07 | 560 |
germ layer / neural crest | 1.49e-07 | 560 |
embryonic tissue | 1.49e-07 | 560 |
presumptive structure | 1.49e-07 | 560 |
germ layer / neural crest derived structure | 1.49e-07 | 560 |
epiblast (generic) | 1.49e-07 | 560 |
embryonic structure | 2.08e-07 | 564 |
developing anatomical structure | 8.05e-07 | 581 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.