FFCP PHASE1:Hg19::chr2:38295461..38295480,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C667|description=CAGE_peak_at_chr2:38295461..38295480,-|id=chr2:38295461..38295480,-|ontology_enrichment_celltype=CL:0002194!2.87e-18!63;CL:0000576!2.87e-18!63;CL:0000040!2.87e-18!63;CL:0000559!2.87e-18!63;CL:0002057!1.34e-17!42;CL:0002009!2.64e-17!65;CL:0000860!9.52e-17!45;CL:0000839!4.65e-16!70;CL:0000557!1.19e-15!71;CL:0000766!1.38e-14!76;CL:0002320!2.91e-13!365;CL:0000134!3.16e-12!358;CL:0000219!2.25e-11!390;CL:0000048!1.51e-10!430;CL:0000034!5.59e-10!444;CL:0000723!5.95e-10!436;CL:0000763!1.40e-09!112;CL:0000049!1.40e-09!112;CL:0002371!2.08e-08!591;CL:0000144!6.82e-07!625|ontology_enrichment_celltype_v019=CL:0000860;3.57e-36;33!CL:0002057;3.57e-36;33!CL:0000473;3.67e-30;39!CL:0000234;3.67e-30;39!CL:0000576;6.36e-18;48!CL:0000766;2.32e-09;69!CL:0000153;3.49e-09;9!CL:0000447;3.49e-09;9!CL:0002579;6.66e-08;3!CL:0000214;7.37e-08;3!CL:0000135;1.26e-07;3!CL:0000388;1.26e-07;3!CL:0002580;2.58e-07;3!CL:0002590;2.58e-07;3!CL:0002334;8.25e-07;12!CL:0000763;9.40e-07;100|ontology_enrichment_celltype_v019_2=CL:0000473,2.98e-33,48;CL:0000234,2.98e-33,48;CL:0000860,1.11e-30,42;CL:0002057,1.11e-30,42;CL:0002194,1.01e-25,59;CL:0000576,1.01e-25,59;CL:0000040,1.01e-25,59;CL:0000559,1.01e-25,59;CL:0002009,9.46e-25,61;CL:0000839,1.41e-22,66;CL:0000557,3.52e-22,67;CL:0000766,2.31e-20,72;CL:0000763,3.23e-12,108;CL:0000049,3.23e-12,108;CL:0002087,3.17e-11,115;CL:0000134,6.32e-11,354;CL:0002031,1.37e-10,120;CL:0002320,1.43e-10,361;CL:0000048,3.35e-10,427;CL:0000723,5.93e-10,433;CL:0000034,1.24e-09,441;CL:0000219,2.54e-09,386;CL:0000153,3.98e-09,9;CL:0000447,3.98e-09,9;CL:0000738,7.20e-09,136;CL:0002579,6.45e-08,3;CL:0000214,6.90e-08,3;CL:0000135,1.59e-07,3;CL:0000388,1.59e-07,3;CL:0002590,3.24e-07,3;CL:0002580,3.56e-07,3;CL:0002032,7.02e-07,161;CL:0000837,7.02e-07,161;CL:0000988,9.48e-07,177;CL:0002334,9.50e-07,12|ontology_enrichment_development_v019=CL:0002057;6.52e-22;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004765!2.35e-17!101;UBERON:0001434!2.35e-17!101;UBERON:0001474!4.31e-15!86;UBERON:0002371!1.99e-14!80;UBERON:0002204!2.66e-13!167;UBERON:0002384!4.03e-13!375;UBERON:0002390!3.83e-09!102;UBERON:0003061!3.83e-09!102;UBERON:0002405!1.03e-08!115;UBERON:0002193!1.63e-08!112|ontology_enrichment_uberon_v019=UBERON:0004457;2.04e-09;9!UBERON:0000042;2.04e-09;9!UBERON:0006915;7.37e-08;3!UBERON:0007616;7.37e-08;3!UBERON:0002217;7.37e-08;3!UBERON:0002018;7.37e-08;3!UBERON:0007846;1.26e-07;3!UBERON:0000043;1.26e-07;3!UBERON:0007845;1.26e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.12e-21,82;UBERON:0002371,2.52e-21,76;UBERON:0001434,5.92e-21,100;UBERON:0004765,2.40e-19,90;UBERON:0002204,4.65e-17,167;UBERON:0002405,1.22e-16,93;UBERON:0002390,1.43e-15,98;UBERON:0003061,1.43e-15,98;UBERON:0002193,9.95e-14,108;UBERON:0002384,4.36e-10,371;UBERON:0006915,6.90e-08,3;UBERON:0007616,6.90e-08,3;UBERON:0002217,6.90e-08,3;UBERON:0002018,6.90e-08,3;UBERON:0007846,1.59e-07,3;UBERON:0000043,1.59e-07,3;UBERON:0007845,1.59e-07,3;UBERON:0004457,4.34e-07,12;UBERON:0000042,4.34e-07,12|phase1_expression=0.908391896352783,1.2846031433459,0.986680828671798,0,0,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,1.74477886535478,0.755751887377619,0.727752183563449,0.929716147622738,0.822335776043652,1.85823822537062,5.17846306179871,2.30544635876191,3.54723344832878,1.03423704220986,0,0,0.941211697713023,1.63743690034707,1.57306439111559,0.612167784741805,0.962787081228281,1.91801137739712,1.9791078011203,4.78712778291916,2.55734850319616,0.580418477257168,0.56738522469114,1.24564449799115,5.7787193009051,7.30076085788282,3.69221035998698,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,1.00267582127178,2.89693037921647,0,0.486634870302636,1.03988298880475,0.665188192387692,0.175669571386252,0,0,0,0.324547393654683,0.696518949197069,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0.302714855289863,0,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0.309157587715317,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.504641701751257,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C667 | |||
|description=CAGE_peak_at_chr2:38295461..38295480,- | |||
|id=chr2:38295461..38295480,- | |||
|ontology_enrichment_celltype=CL:0002194!2.87e-18!63;CL:0000576!2.87e-18!63;CL:0000040!2.87e-18!63;CL:0000559!2.87e-18!63;CL:0002057!1.34e-17!42;CL:0002009!2.64e-17!65;CL:0000860!9.52e-17!45;CL:0000839!4.65e-16!70;CL:0000557!1.19e-15!71;CL:0000766!1.38e-14!76;CL:0002320!2.91e-13!365;CL:0000134!3.16e-12!358;CL:0000219!2.25e-11!390;CL:0000048!1.51e-10!430;CL:0000034!5.59e-10!444;CL:0000723!5.95e-10!436;CL:0000763!1.40e-09!112;CL:0000049!1.40e-09!112;CL:0002371!2.08e-08!591;CL:0000144!6.82e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.57e-36;33!CL:0002057;3.57e-36;33!CL:0000473;3.67e-30;39!CL:0000234;3.67e-30;39!CL:0000576;6.36e-18;48!CL:0000766;2.32e-09;69!CL:0000153;3.49e-09;9!CL:0000447;3.49e-09;9!CL:0002579;6.66e-08;3!CL:0000214;7.37e-08;3!CL:0000135;1.26e-07;3!CL:0000388;1.26e-07;3!CL:0002580;2.58e-07;3!CL:0002590;2.58e-07;3!CL:0002334;8.25e-07;12!CL:0000763;9.40e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.98e-33,48;CL:0000234,2.98e-33,48;CL:0000860,1.11e-30,42;CL:0002057,1.11e-30,42;CL:0002194,1.01e-25,59;CL:0000576,1.01e-25,59;CL:0000040,1.01e-25,59;CL:0000559,1.01e-25,59;CL:0002009,9.46e-25,61;CL:0000839,1.41e-22,66;CL:0000557,3.52e-22,67;CL:0000766,2.31e-20,72;CL:0000763,3.23e-12,108;CL:0000049,3.23e-12,108;CL:0002087,3.17e-11,115;CL:0000134,6.32e-11,354;CL:0002031,1.37e-10,120;CL:0002320,1.43e-10,361;CL:0000048,3.35e-10,427;CL:0000723,5.93e-10,433;CL:0000034,1.24e-09,441;CL:0000219,2.54e-09,386;CL:0000153,3.98e-09,9;CL:0000447,3.98e-09,9;CL:0000738,7.20e-09,136;CL:0002579,6.45e-08,3;CL:0000214,6.90e-08,3;CL:0000135,1.59e-07,3;CL:0000388,1.59e-07,3;CL:0002590,3.24e-07,3;CL:0002580,3.56e-07,3;CL:0002032,7.02e-07,161;CL:0000837,7.02e-07,161;CL:0000988,9.48e-07,177;CL:0002334,9.50e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;6.52e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!2.35e-17!101;UBERON:0001434!2.35e-17!101;UBERON:0001474!4.31e-15!86;UBERON:0002371!1.99e-14!80;UBERON:0002204!2.66e-13!167;UBERON:0002384!4.03e-13!375;UBERON:0002390!3.83e-09!102;UBERON:0003061!3.83e-09!102;UBERON:0002405!1.03e-08!115;UBERON:0002193!1.63e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.04e-09;9!UBERON:0000042;2.04e-09;9!UBERON:0006915;7.37e-08;3!UBERON:0007616;7.37e-08;3!UBERON:0002217;7.37e-08;3!UBERON:0002018;7.37e-08;3!UBERON:0007846;1.26e-07;3!UBERON:0000043;1.26e-07;3!UBERON:0007845;1.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.12e-21,82;UBERON:0002371,2.52e-21,76;UBERON:0001434,5.92e-21,100;UBERON:0004765,2.40e-19,90;UBERON:0002204,4.65e-17,167;UBERON:0002405,1.22e-16,93;UBERON:0002390,1.43e-15,98;UBERON:0003061,1.43e-15,98;UBERON:0002193,9.95e-14,108;UBERON:0002384,4.36e-10,371;UBERON:0006915,6.90e-08,3;UBERON:0007616,6.90e-08,3;UBERON:0002217,6.90e-08,3;UBERON:0002018,6.90e-08,3;UBERON:0007846,1.59e-07,3;UBERON:0000043,1.59e-07,3;UBERON:0007845,1.59e-07,3;UBERON:0004457,4.34e-07,12;UBERON:0000042,4.34e-07,12 | |||
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|short_description=p@chr2:38295461..38295480,- | |||
}} |
Revision as of 18:30, 12 September 2013
Short description: | p@chr2:38295461..38295480, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:38295461..38295480, - |
Coexpression cluster: | C667_CD14_tenocyte_Synoviocyte_Smooth_dura_Preadipocyte_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 1.12e-21 | 82 |
bone marrow | 2.52e-21 | 76 |
skeletal system | 5.92e-21 | 100 |
skeletal element | 2.40e-19 | 90 |
musculoskeletal system | 4.65e-17 | 167 |
immune system | 1.22e-16 | 93 |
hematopoietic system | 1.43e-15 | 98 |
blood island | 1.43e-15 | 98 |
hemolymphoid system | 9.95e-14 | 108 |
connective tissue | 4.36e-10 | 371 |
stratified squamous epithelium | 6.90e-08 | 3 |
layer of synovial tissue | 6.90e-08 | 3 |
synovial joint | 6.90e-08 | 3 |
synovial membrane of synovial joint | 6.90e-08 | 3 |
dense regular connective tissue | 1.59e-07 | 3 |
tendon | 1.59e-07 | 3 |
regular connective tissue | 1.59e-07 | 3 |
cavity lining | 4.34e-07 | 12 |
serous membrane | 4.34e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.