FFCP PHASE1:Hg19::chr2:37086230..37086242,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1140|description=CAGE_peak_at_chr2:37086230..37086242,+|id=chr2:37086230..37086242,+|ontology_enrichment_celltype=CL:0000946!1.21e-10!1;CL:0000786!1.21e-10!1;CL:0000980!1.21e-10!1;CL:0000945!7.09e-10!24;CL:0000826!7.09e-10!24;CL:0000181!5.90e-08!12;CL:0000417!5.90e-08!12;CL:0000668!5.90e-08!12;CL:0000414!5.90e-08!12;CL:0000412!5.90e-08!12;CL:0000182!5.90e-08!12;CL:0000223!2.99e-07!59|ontology_enrichment_celltype_v019=CL:0000182;1.81e-25;12!CL:0000945;4.11e-13;24|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12;CL:0000945,4.11e-13,24;CL:0000826,4.11e-13,24|ontology_enrichment_development_v019=UBERON:0004161;1.07e-27;11!UBERON:0009497;1.39e-23;13!UBERON:0001041;1.09e-10;30!UBERON:0003104;3.72e-10;31|ontology_enrichment_disease=DOID:2355!1.61e-10!1|ontology_enrichment_disease_v019=DOID:7;9.02e-09;39|ontology_enrichment_disease_v019_2=DOID:7,2.18e-08,39|ontology_enrichment_uberon=UBERON:0005409!3.47e-12!35;UBERON:0000160!9.15e-12!27;UBERON:0004921!2.56e-10!129;UBERON:0004185!2.56e-10!129;UBERON:0002107!2.01e-08!19;UBERON:0006925!2.01e-08!19;UBERON:0008836!2.01e-08!19;UBERON:0001007!3.03e-08!155;UBERON:0001555!3.03e-08!155;UBERON:0007026!3.03e-08!155;UBERON:0004119!2.16e-07!169;UBERON:0000925!2.16e-07!169;UBERON:0006595!2.16e-07!169;UBERON:0008835!2.73e-07!22;UBERON:0003894!2.73e-07!22;UBERON:0009854!5.59e-07!23|ontology_enrichment_uberon_v019=UBERON:0002107;2.05e-16;19!UBERON:0006925;2.05e-16;19!UBERON:0002423;1.13e-12;25!UBERON:0002365;1.25e-09;31!UBERON:0002330;1.25e-09;31!UBERON:0002368;4.35e-09;33!UBERON:0000949;3.52e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.05e-16,19;UBERON:0006925,2.05e-16,19;UBERON:0008836,2.05e-16,19;UBERON:0008835,2.73e-14,22;UBERON:0003894,2.73e-14,22;UBERON:0009854,1.05e-13,23;UBERON:0007499,1.13e-12,25;UBERON:0009497,1.13e-12,25;UBERON:0000015,1.13e-12,25;UBERON:0002423,1.13e-12,25;UBERON:0006235,1.13e-12,25;UBERON:0004161,1.13e-12,25;UBERON:0009856,3.25e-12,26;UBERON:0002365,2.29e-10,31;UBERON:0002330,2.29e-10,31;UBERON:0002368,2.89e-09,35;UBERON:0000949,2.33e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36218985290986,1.14940825229924,2.75487734597877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3330750268973,1.89556474276683,3.30277364885506,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr2:37086230..37086242,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1140 | |||
|description=CAGE_peak_at_chr2:37086230..37086242,+ | |||
|id=chr2:37086230..37086242,+ | |||
|ontology_enrichment_celltype=CL:0000946!1.21e-10!1;CL:0000786!1.21e-10!1;CL:0000980!1.21e-10!1;CL:0000945!7.09e-10!24;CL:0000826!7.09e-10!24;CL:0000181!5.90e-08!12;CL:0000417!5.90e-08!12;CL:0000668!5.90e-08!12;CL:0000414!5.90e-08!12;CL:0000412!5.90e-08!12;CL:0000182!5.90e-08!12;CL:0000223!2.99e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.81e-25;12!CL:0000945;4.11e-13;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12;CL:0000945,4.11e-13,24;CL:0000826,4.11e-13,24 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.07e-27;11!UBERON:0009497;1.39e-23;13!UBERON:0001041;1.09e-10;30!UBERON:0003104;3.72e-10;31 | |||
|ontology_enrichment_disease=DOID:2355!1.61e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:7;9.02e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.18e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0005409!3.47e-12!35;UBERON:0000160!9.15e-12!27;UBERON:0004921!2.56e-10!129;UBERON:0004185!2.56e-10!129;UBERON:0002107!2.01e-08!19;UBERON:0006925!2.01e-08!19;UBERON:0008836!2.01e-08!19;UBERON:0001007!3.03e-08!155;UBERON:0001555!3.03e-08!155;UBERON:0007026!3.03e-08!155;UBERON:0004119!2.16e-07!169;UBERON:0000925!2.16e-07!169;UBERON:0006595!2.16e-07!169;UBERON:0008835!2.73e-07!22;UBERON:0003894!2.73e-07!22;UBERON:0009854!5.59e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.05e-16;19!UBERON:0006925;2.05e-16;19!UBERON:0002423;1.13e-12;25!UBERON:0002365;1.25e-09;31!UBERON:0002330;1.25e-09;31!UBERON:0002368;4.35e-09;33!UBERON:0000949;3.52e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.05e-16,19;UBERON:0006925,2.05e-16,19;UBERON:0008836,2.05e-16,19;UBERON:0008835,2.73e-14,22;UBERON:0003894,2.73e-14,22;UBERON:0009854,1.05e-13,23;UBERON:0007499,1.13e-12,25;UBERON:0009497,1.13e-12,25;UBERON:0000015,1.13e-12,25;UBERON:0002423,1.13e-12,25;UBERON:0006235,1.13e-12,25;UBERON:0004161,1.13e-12,25;UBERON:0009856,3.25e-12,26;UBERON:0002365,2.29e-10,31;UBERON:0002330,2.29e-10,31;UBERON:0002368,2.89e-09,35;UBERON:0000949,2.33e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36218985290986,1.14940825229924,2.75487734597877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3330750268973,1.89556474276683,3.30277364885506,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr2:37086230..37086242,+ | |||
}} |
Revision as of 18:25, 12 September 2013
Short description: | p@chr2:37086230..37086242, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:37086230..37086242, + |
Coexpression cluster: | C1140_hepatocellular_B_small_gastrointestinal_argyrophil_liver_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-25 | 12 |
lymphocyte of B lineage | 4.11e-13 | 24 |
pro-B cell | 4.11e-13 | 24 |
Ontology term | p-value | n |
---|---|---|
liver | 2.05e-16 | 19 |
digestive gland | 2.05e-16 | 19 |
liver bud | 2.05e-16 | 19 |
hepatic diverticulum | 2.73e-14 | 22 |
liver primordium | 2.73e-14 | 22 |
digestive tract diverticulum | 1.05e-13 | 23 |
epithelial sac | 1.13e-12 | 25 |
epithelium of foregut-midgut junction | 1.13e-12 | 25 |
anatomical boundary | 1.13e-12 | 25 |
hepatobiliary system | 1.13e-12 | 25 |
foregut-midgut junction | 1.13e-12 | 25 |
septum transversum | 1.13e-12 | 25 |
sac | 3.25e-12 | 26 |
exocrine gland | 2.29e-10 | 31 |
exocrine system | 2.29e-10 | 31 |
endocrine gland | 2.89e-09 | 35 |
endocrine system | 2.33e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.18e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.