FFCP PHASE1:Hg19::chr2:29353197..29353206,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C619|description=CAGE_peak_at_chr2:29353197..29353206,-|id=chr2:29353197..29353206,-|ontology_enrichment_celltype=CL:0002057!5.65e-15!42;CL:0000860!1.14e-13!45;CL:0002194!2.61e-08!63;CL:0000576!2.61e-08!63;CL:0000040!2.61e-08!63;CL:0000559!2.61e-08!63;CL:0002009!6.22e-08!65;CL:0000839!4.35e-07!70;CL:0000557!6.21e-07!71|ontology_enrichment_celltype_v019=CL:0000860;2.52e-23;33!CL:0002057;2.52e-23;33!CL:0002591;2.47e-19;1!CL:0000473;4.00e-18;39!CL:0000234;4.00e-18;39!CL:0000576;1.06e-11;48!CL:0000766;1.44e-07;69!CL:0000346;2.55e-07;3!CL:1000428;2.55e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-20,42;CL:0002057,1.12e-20,42;CL:0002591,5.62e-19,1;CL:0000473,4.58e-18,48;CL:0000234,4.58e-18,48;CL:0002194,2.11e-14,59;CL:0000576,2.11e-14,59;CL:0000040,2.11e-14,59;CL:0000559,2.11e-14,59;CL:0002009,6.30e-14,61;CL:0000839,7.25e-13,66;CL:0000557,1.13e-12,67;CL:0000766,8.79e-12,72;CL:0000763,9.08e-08,108;CL:0000049,9.08e-08,108;CL:0000346,2.32e-07,3;CL:1000428,2.32e-07,3;CL:0002087,2.83e-07,115;CL:0002031,5.90e-07,120|ontology_enrichment_development_v019=CL:0002057;1.98e-15;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000078;2.37e-10;2!UBERON:0002012;2.37e-10;2!UBERON:0008886;2.37e-10;2!UBERON:0000412;2.55e-07;3!UBERON:0001992;2.55e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.74e-11,76;UBERON:0001474,2.54e-10,82;UBERON:0000078,3.58e-10,2;UBERON:0007497,3.58e-10,2;UBERON:0003643,3.58e-10,2;UBERON:0003504,3.58e-10,2;UBERON:0003469,3.58e-10,2;UBERON:0003496,3.58e-10,2;UBERON:0002012,3.58e-10,2;UBERON:0008886,3.58e-10,2;UBERON:0007303,3.58e-10,2;UBERON:0002061,3.58e-10,2;UBERON:0005432,3.58e-10,2;UBERON:0004363,3.58e-10,2;UBERON:0004765,2.21e-09,90;UBERON:0002405,4.52e-09,93;UBERON:0002390,1.36e-08,98;UBERON:0003061,1.36e-08,98;UBERON:0001434,2.05e-08,100;UBERON:0002193,9.08e-08,108;UBERON:0000412,2.32e-07,3;UBERON:0001992,2.32e-07,3;UBERON:0004145,3.35e-07,3|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0.768482119587302,0.236482229888585,0,1.29096936716765,0,0.188242339542605,0.818718450173537,0,0,0.641858054152187,0,0,0.199463657621632,0,1.16083695451434,1.13477044938228,1.24564449799115,1.50749199154046,0.521482918420201,0,1.21079900526674,0.736555271975129,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43216939740487,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.248505071130865,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C619 | |||
|description=CAGE_peak_at_chr2:29353197..29353206,- | |||
|id=chr2:29353197..29353206,- | |||
|ontology_enrichment_celltype=CL:0002057!5.65e-15!42;CL:0000860!1.14e-13!45;CL:0002194!2.61e-08!63;CL:0000576!2.61e-08!63;CL:0000040!2.61e-08!63;CL:0000559!2.61e-08!63;CL:0002009!6.22e-08!65;CL:0000839!4.35e-07!70;CL:0000557!6.21e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-23;33!CL:0002057;2.52e-23;33!CL:0002591;2.47e-19;1!CL:0000473;4.00e-18;39!CL:0000234;4.00e-18;39!CL:0000576;1.06e-11;48!CL:0000766;1.44e-07;69!CL:0000346;2.55e-07;3!CL:1000428;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.12e-20,42;CL:0002057,1.12e-20,42;CL:0002591,5.62e-19,1;CL:0000473,4.58e-18,48;CL:0000234,4.58e-18,48;CL:0002194,2.11e-14,59;CL:0000576,2.11e-14,59;CL:0000040,2.11e-14,59;CL:0000559,2.11e-14,59;CL:0002009,6.30e-14,61;CL:0000839,7.25e-13,66;CL:0000557,1.13e-12,67;CL:0000766,8.79e-12,72;CL:0000763,9.08e-08,108;CL:0000049,9.08e-08,108;CL:0000346,2.32e-07,3;CL:1000428,2.32e-07,3;CL:0002087,2.83e-07,115;CL:0002031,5.90e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.37e-10;2!UBERON:0002012;2.37e-10;2!UBERON:0008886;2.37e-10;2!UBERON:0000412;2.55e-07;3!UBERON:0001992;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.74e-11,76;UBERON:0001474,2.54e-10,82;UBERON:0000078,3.58e-10,2;UBERON:0007497,3.58e-10,2;UBERON:0003643,3.58e-10,2;UBERON:0003504,3.58e-10,2;UBERON:0003469,3.58e-10,2;UBERON:0003496,3.58e-10,2;UBERON:0002012,3.58e-10,2;UBERON:0008886,3.58e-10,2;UBERON:0007303,3.58e-10,2;UBERON:0002061,3.58e-10,2;UBERON:0005432,3.58e-10,2;UBERON:0004363,3.58e-10,2;UBERON:0004765,2.21e-09,90;UBERON:0002405,4.52e-09,93;UBERON:0002390,1.36e-08,98;UBERON:0003061,1.36e-08,98;UBERON:0001434,2.05e-08,100;UBERON:0002193,9.08e-08,108;UBERON:0000412,2.32e-07,3;UBERON:0001992,2.32e-07,3;UBERON:0004145,3.35e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0.768482119587302,0.236482229888585,0,1.29096936716765,0,0.188242339542605,0.818718450173537,0,0,0.641858054152187,0,0,0.199463657621632,0,1.16083695451434,1.13477044938228,1.24564449799115,1.50749199154046,0.521482918420201,0,1.21079900526674,0.736555271975129,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43216939740487,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.248505071130865,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,5.85761976830928,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:29353197..29353206,- | |||
}} |
Revision as of 18:14, 12 September 2013
Short description: | p@chr2:29353197..29353206, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:29353197..29353206, - |
Coexpression cluster: | C619_squamous_bile_Small_Mammary_mucinous_Tracheal_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.12e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-20 | 42 |
smooth muscle cell of the pulmonary artery | 5.62e-19 | 1 |
defensive cell | 4.58e-18 | 48 |
phagocyte | 4.58e-18 | 48 |
monopoietic cell | 2.11e-14 | 59 |
monocyte | 2.11e-14 | 59 |
monoblast | 2.11e-14 | 59 |
promonocyte | 2.11e-14 | 59 |
macrophage dendritic cell progenitor | 6.30e-14 | 61 |
myeloid lineage restricted progenitor cell | 7.25e-13 | 66 |
granulocyte monocyte progenitor cell | 1.13e-12 | 67 |
myeloid leukocyte | 8.79e-12 | 72 |
myeloid cell | 9.08e-08 | 108 |
common myeloid progenitor | 9.08e-08 | 108 |
hair follicle dermal papilla cell | 2.32e-07 | 3 |
stem cell of epidermis | 2.32e-07 | 3 |
nongranular leukocyte | 2.83e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 5.90e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.74e-11 | 76 |
bone element | 2.54e-10 | 82 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.58e-10 | 2 |
developing epithelial placode | 3.58e-10 | 2 |
respiratory system arterial blood vessel | 3.58e-10 | 2 |
respiratory system blood vessel | 3.58e-10 | 2 |
respiratory system artery | 3.58e-10 | 2 |
head blood vessel | 3.58e-10 | 2 |
pulmonary artery | 3.58e-10 | 2 |
pulmonary vascular system | 3.58e-10 | 2 |
pharyngeal vasculature | 3.58e-10 | 2 |
truncus arteriosus | 3.58e-10 | 2 |
aortic sac | 3.58e-10 | 2 |
pharyngeal arch artery | 3.58e-10 | 2 |
skeletal element | 2.21e-09 | 90 |
immune system | 4.52e-09 | 93 |
hematopoietic system | 1.36e-08 | 98 |
blood island | 1.36e-08 | 98 |
skeletal system | 2.05e-08 | 100 |
hemolymphoid system | 9.08e-08 | 108 |
dermal papilla | 2.32e-07 | 3 |
papillary layer of dermis | 2.32e-07 | 3 |
outflow tract | 3.35e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.