FFCP PHASE1:Hg19::chr2:24583602..24583680,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50618|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6184|TSSclassifier=S|UniProt=Q9NZM3|association_with_transcript=-19bp_to_ENST00000355123_5end|description=CAGE_peak_2_at_ITSN2_5end|id=chr2:24583602..24583680,-|ontology_enrichment_celltype=CL:0000738!1.22e-24!140;CL:0000037!6.53e-20!172;CL:0000566!6.53e-20!172;CL:0002087!6.28e-19!119;CL:0002031!2.79e-18!124;CL:0000838!4.01e-18!52;CL:0000988!4.23e-18!182;CL:0000542!4.49e-18!53;CL:0000051!4.49e-18!53;CL:0002032!1.62e-17!165;CL:0000837!1.62e-17!165;CL:0000945!1.35e-09!24;CL:0000826!1.35e-09!24;CL:0000791!1.36e-09!18;CL:0000789!1.36e-09!18;CL:0002420!1.36e-09!18;CL:0002419!1.36e-09!18;CL:0000790!1.36e-09!18;CL:0000084!2.24e-08!25;CL:0000827!2.24e-08!25;CL:0000236!2.96e-08!14;CL:0000625!2.37e-07!11;CL:0002057!3.00e-07!42|ontology_enrichment_celltype_v019=CL:0000542;2.08e-11;53!CL:0000945;6.31e-10;24!CL:0000791;6.74e-10;18!CL:0000789;6.74e-10;18!CL:0002419;6.74e-10;18!CL:0000084;9.25e-09;25!CL:0000236;2.53e-08;13!CL:0002087;5.95e-08;104!CL:0000625;1.06e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,1.74e-27,136;CL:0000037,4.19e-22,168;CL:0002087,1.15e-21,115;CL:0000988,6.87e-21,177;CL:0002031,1.41e-20,120;CL:0002032,1.67e-19,161;CL:0000837,1.67e-19,161;CL:0000838,4.09e-19,52;CL:0000542,4.62e-19,53;CL:0000051,4.62e-19,53;CL:0000945,5.00e-10,24;CL:0000826,5.00e-10,24;CL:0000791,8.15e-10,18;CL:0000789,8.15e-10,18;CL:0002420,8.15e-10,18;CL:0002419,8.15e-10,18;CL:0000790,8.15e-10,18;CL:0000084,7.82e-09,25;CL:0000827,7.82e-09,25;CL:0000236,1.24e-08,14;CL:0000625,1.11e-07,11;CL:0000860,2.34e-07,42;CL:0002057,2.34e-07,42|ontology_enrichment_development_v019=CL:0000051;2.08e-11;53!CL:0000790;6.74e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.11e-09!112;UBERON:0002390!2.65e-08!102;UBERON:0003061!2.65e-08!102;UBERON:0000178!4.48e-07!15;UBERON:0000179!4.48e-07!15;UBERON:0000463!4.48e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;3.24e-07;15!UBERON:0000179;3.24e-07;15!UBERON:0000463;3.24e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.62e-11,108;UBERON:0002390,5.58e-10,98;UBERON:0003061,5.58e-10,98;UBERON:0000178,2.17e-07,15;UBERON:0000179,2.17e-07,15;UBERON:0000463,2.17e-07,15|phase1_expression=1.45342703416445,0.428201047781966,0.845726424575827,0,0,0,0,0,0,0.491467873003018,1.39560233594486,3.9319446983431,1.58260186937072,1.36142988256051,1.32558950291166,0,0,0,0,1.10808952269109,0.816002764977012,0.626909442956176,0,0.821246550437305,1.12988375635323,7.71775398054308,8.21005894499458,6.13944094246698,2.36018566109342,5.37361157336098,2.32224184974114,0.919421224478927,0.6024118375565,0.369754010166788,3.95082722959538,6.96629239188365,4.69760702935756,7.20194031091441,6.01633342410425,5.20826089718044,0.895661896959697,3.2389366601898,0.77272670290256,2.76256653681173,1.88937971844405,2.66842467306598,8.59987436551033,5.75635043230556,3.09706370895104,2.58923153089935,3.07392847834921,2.83778675866302,2.41321976515633,1.29096936716765,4.06279459783025,5.27078550719293,4.63940455098338,7.19115150224271,7.03992952453076,6.73950956859797,5.11469700639233,1.9791078011203,1.79517291859469,2.13112375266347,8.41606792022894,5.10646702222026,9.9651559839292,2.00998932205395,1.5644487552606,2.17188844705117,7.26479403160043,5.52416453981347,6.32924774881769,2.11255286311942,2.33864729961548,0.628975936525128,0.898629049171961,0.450530678524519,1.28580469357664,3.13514018115373,2.58591680358817,1.82664153764634,8.79981222306614,15.2918811153397,21.3482220927253,18.7761297929263,12.8126715851524,9.77079147922622,10.5767179645578,18.1270213361719,18.2148150115023,11.1575065980478,17.9668417218858,10.5737062863221,21.8598339562799,3.68737718685108,15.343362068879,8.25322601773246,10.485676448975,7.02183280640848,7.17028986593899,7.101717086021,5.84480185223734,4.2335973616366,4.41908861212256,5.98141515375777,6.22848886659536,5.89220070738106,6.11278933531428,3.4531959966772,3.86890024900188,7.82468331484642,9.93519973185805,8.02622484269139,10.4535523804977,5.09892042139048,11.1133943144557,9.96519591899627,6.32549230048757,8.60126618675061,8.46408490013344,6.65316431113862,8.13105643019973,8.57510294734603,4.99722906209383,5.6826540490564,9.85353596305256,14.9188989986302,8.02320587350522,10.4273570795615,0,0,0.511450247374121,0,0.50133791063589,0.869079113764942,0.795285947051099,0.973269740605272,2.83604451492204,2.21729397462564,2.63504357079378,2.16115474571226,0.728590576585084,0.370784442784429,2.59637914923747,2.96020553408754,1.86141144726411,16.2173624527633,20.0198218773045,17.08704506116,0.993812036833525,0,0.347140501607594,0,1.25849830862972,0.825354125820202,0.835979866147242,2.32575083252396,4.26919515224052,3.01248551488203,3.62546385398232,1.52054421143703,1.95249646038536,1.47065232138347,0,0.714397826272638,0.44905874525234,0.675668882899933,0,0,0.549605231791222,6.58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.85359238546975,0.691259661814092,1.29068207646083,2.01164401241961,1.70426809518315,1.27016115057279,2.7492824225286,1.5510319283216,1.91107787795487,3.69122924932715,1.17780280338292,3.41370189950354,1.29485767437579,2.87455859197492,0,3.88568794447312,4.44484980578001,2.98426162742052,0.594600453887843,1.24240690242856,0.439762066981716,4.37792246343353,2.77826969188601,1.5299169235277,0.940634592723046,0.980593287015622,1.17838273550813,0.981542335574726,1.18818560130834,2.5359343655004,2.20905249094162,6.57887425858975,4.06084694233536,17.5896434427875,2.85686301769052,1.05868461514708,1.92579280054004,2.92134555298607,6.88093925106811,0.716697915757256,1.10440093535229,0.951880862672806,2.18175345170189,4.7612415646386,0.371995018166751,0,1.29787968637137,2.64949492153666,1.31118686356435,1.77377901416012,2.2437542543236,0,5.88127357023007,3.50990555009325,1.81868875723775,1.33982065078089,0.829169439458779,0.827463966895162,2.34557380091079,6.18967521805725,13.7574377950693,14.0288854308639,0.897054900644907,5.21906697880952,11.7227969595767,0.870866991587845,1.36893320434112,7.20666967256087,5.30744319905805,4.32458463509817,4.39577650499262,2.13454691755431,0,2.87440646741078,0,1.58913877437726,1.22068853494722,0.665756774185513,8.05095174364105,5.44966436915496|short_description=p2@ITSN2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=50618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6184 | |||
|TSSclassifier=S | |||
|UniProt=Q9NZM3 | |||
|association_with_transcript=-19bp_to_ENST00000355123_5end | |||
|description=CAGE_peak_2_at_ITSN2_5end | |||
|id=chr2:24583602..24583680,- | |||
|ontology_enrichment_celltype=CL:0000738!1.22e-24!140;CL:0000037!6.53e-20!172;CL:0000566!6.53e-20!172;CL:0002087!6.28e-19!119;CL:0002031!2.79e-18!124;CL:0000838!4.01e-18!52;CL:0000988!4.23e-18!182;CL:0000542!4.49e-18!53;CL:0000051!4.49e-18!53;CL:0002032!1.62e-17!165;CL:0000837!1.62e-17!165;CL:0000945!1.35e-09!24;CL:0000826!1.35e-09!24;CL:0000791!1.36e-09!18;CL:0000789!1.36e-09!18;CL:0002420!1.36e-09!18;CL:0002419!1.36e-09!18;CL:0000790!1.36e-09!18;CL:0000084!2.24e-08!25;CL:0000827!2.24e-08!25;CL:0000236!2.96e-08!14;CL:0000625!2.37e-07!11;CL:0002057!3.00e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.08e-11;53!CL:0000945;6.31e-10;24!CL:0000791;6.74e-10;18!CL:0000789;6.74e-10;18!CL:0002419;6.74e-10;18!CL:0000084;9.25e-09;25!CL:0000236;2.53e-08;13!CL:0002087;5.95e-08;104!CL:0000625;1.06e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.74e-27,136;CL:0000037,4.19e-22,168;CL:0002087,1.15e-21,115;CL:0000988,6.87e-21,177;CL:0002031,1.41e-20,120;CL:0002032,1.67e-19,161;CL:0000837,1.67e-19,161;CL:0000838,4.09e-19,52;CL:0000542,4.62e-19,53;CL:0000051,4.62e-19,53;CL:0000945,5.00e-10,24;CL:0000826,5.00e-10,24;CL:0000791,8.15e-10,18;CL:0000789,8.15e-10,18;CL:0002420,8.15e-10,18;CL:0002419,8.15e-10,18;CL:0000790,8.15e-10,18;CL:0000084,7.82e-09,25;CL:0000827,7.82e-09,25;CL:0000236,1.24e-08,14;CL:0000625,1.11e-07,11;CL:0000860,2.34e-07,42;CL:0002057,2.34e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000051;2.08e-11;53!CL:0000790;6.74e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.11e-09!112;UBERON:0002390!2.65e-08!102;UBERON:0003061!2.65e-08!102;UBERON:0000178!4.48e-07!15;UBERON:0000179!4.48e-07!15;UBERON:0000463!4.48e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.24e-07;15!UBERON:0000179;3.24e-07;15!UBERON:0000463;3.24e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.62e-11,108;UBERON:0002390,5.58e-10,98;UBERON:0003061,5.58e-10,98;UBERON:0000178,2.17e-07,15;UBERON:0000179,2.17e-07,15;UBERON:0000463,2.17e-07,15 | |||
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| |||
|short_description=p2@ITSN2 | |||
}} |
Revision as of 17:56, 12 September 2013
Short description: | p2@ITSN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ITSN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000355123_5end |
EntrezGene: | ITSN2 |
HGNC: | 6184 |
UniProt: | Q9NZM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.74e-27 | 136 |
hematopoietic stem cell | 4.19e-22 | 168 |
nongranular leukocyte | 1.15e-21 | 115 |
hematopoietic cell | 6.87e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 1.41e-20 | 120 |
hematopoietic oligopotent progenitor cell | 1.67e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-19 | 161 |
lymphoid lineage restricted progenitor cell | 4.09e-19 | 52 |
lymphocyte | 4.62e-19 | 53 |
common lymphoid progenitor | 4.62e-19 | 53 |
lymphocyte of B lineage | 5.00e-10 | 24 |
pro-B cell | 5.00e-10 | 24 |
mature alpha-beta T cell | 8.15e-10 | 18 |
alpha-beta T cell | 8.15e-10 | 18 |
immature T cell | 8.15e-10 | 18 |
mature T cell | 8.15e-10 | 18 |
immature alpha-beta T cell | 8.15e-10 | 18 |
T cell | 7.82e-09 | 25 |
pro-T cell | 7.82e-09 | 25 |
B cell | 1.24e-08 | 14 |
CD8-positive, alpha-beta T cell | 1.11e-07 | 11 |
classical monocyte | 2.34e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.62e-11 | 108 |
hematopoietic system | 5.58e-10 | 98 |
blood island | 5.58e-10 | 98 |
blood | 2.17e-07 | 15 |
haemolymphatic fluid | 2.17e-07 | 15 |
organism substance | 2.17e-07 | 15 |
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