FFCP PHASE1:Hg19::chr2:10861749..10861762,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=245973|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18264|TSSclassifier=S|UniProt=Q8NEY4|association_with_transcript=-12bp_to_ENST00000272238,ENST00000381661,NM_001039362,NM_144583,uc002ras.2,uc002rat.2_5end|description=CAGE_peak_1_at_ATP6V1C2_5end|id=chr2:10861749..10861762,+|ontology_enrichment_celltype=CL:0000039!1.55e-09!7;CL:0000586!1.55e-09!7|ontology_enrichment_celltype_v019=CL:0000039;2.12e-19;7!CL:0000586;2.12e-19;7!CL:0002586;2.07e-08;3|ontology_enrichment_celltype_v019_2=CL:0000039,2.08e-19,7;CL:0000586,2.08e-19,7;CL:0002586,1.92e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;9.56e-07;22!DOID:2994;9.56e-07;22|ontology_enrichment_disease_v019_2=DOID:3095,9.49e-07,22;DOID:2994,9.49e-07,22|ontology_enrichment_uberon=UBERON:0003135!2.79e-10!11;UBERON:0007023!8.63e-08!115;UBERON:0001044!1.72e-07!6;UBERON:0003293!1.72e-07!6;UBERON:0003294!1.72e-07!6;UBERON:0010047!1.72e-07!6;UBERON:0000167!1.72e-07!6;UBERON:0003101!3.06e-07!22;UBERON:0000079!3.06e-07!22;UBERON:0000473!4.49e-07!8|ontology_enrichment_uberon_v019=UBERON:0003135;3.61e-15;11!UBERON:0000966;5.17e-13;5!UBERON:0005388;5.17e-13;5!UBERON:0001802;5.17e-13;5!UBERON:0001044;4.59e-11;6!UBERON:0003293;4.59e-11;6!UBERON:0003294;4.59e-11;6!UBERON:0010047;4.59e-11;6!UBERON:0003408;4.59e-11;6!UBERON:0000167;4.59e-11;6!UBERON:0006947;2.49e-09;3!UBERON:0004054;2.49e-09;3!UBERON:0000473;1.32e-08;8!UBERON:0001781;2.07e-08;3!UBERON:0001782;2.07e-08;3!UBERON:0005904;4.58e-07;4!UBERON:0003101;8.50e-07;22!UBERON:0000079;8.50e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.69e-15,11;UBERON:0001044,4.86e-11,6;UBERON:0003293,4.86e-11,6;UBERON:0003294,4.86e-11,6;UBERON:0010047,4.86e-11,6;UBERON:0000167,4.86e-11,6;UBERON:0000966,7.09e-11,6;UBERON:0005388,7.09e-11,6;UBERON:0001802,7.09e-11,6;UBERON:0006947,2.46e-09,3;UBERON:0004054,2.46e-09,3;UBERON:0003408,7.44e-09,10;UBERON:0000473,1.30e-08,8;UBERON:0001782,1.92e-08,3;UBERON:0005424,1.92e-08,3;UBERON:0000166,3.31e-08,22;UBERON:0000153,6.75e-08,62;UBERON:0007811,6.75e-08,62;UBERON:0003133,1.29e-07,48;UBERON:0001444,2.81e-07,49;UBERON:0005904,4.54e-07,4;UBERON:0004175,5.97e-07,25;UBERON:0003101,8.59e-07,22;UBERON:0000079,8.59e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0,0.56738522469114,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,3.44045905312706,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0.397589304964456,1.2781333715647,3.52447587052259,0.252320850875628,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.73217913656106,0,0.439001141634502,1.1240175325762,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.6312121671319,0.063497894292169,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0.460404944679482,0,0,0,0,0,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,3.59030175162945,3.93617574839647,2.27764876265012,19.2686691781241,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.384380134730212,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,20.1467733662307,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,1.88015874927628,0,0,0,0.201799707191048,0,0,2.45792611446766,1.78940886313933,0.834245708559542,0,0,0,0,0,0,0.37428108081644,0.73254089635947,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0.269605053441981,1.25314822272926,1.02314474045374,0,0,0,0,0,0,1.04171104434093,0,0,3.52759689685049,0,0.709163045303809,1.03423011972439,0.291604613383254,0,0,0,0,0,0,0,0,0,3.61666214967846,0,87.6142836674629,26.2989898120632,34.9844537588866,0.957003479195758,0.274792780205587,3.73124343213044,0,0,0,0,0,0,0,0,0,0.163232808159148,0.565412285735763,0.432777279484182,0.995261931078505,0.265372693510018,1.22206028986725,0,0,0,0.202203398942031,0.802577647298789,0,0.547364367646998,8.02224937621568,0,49.3230503561738,2.41981432097328,0,0.0631865796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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=245973 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18264 | |||
|TSSclassifier=S | |||
|UniProt=Q8NEY4 | |||
|association_with_transcript=-12bp_to_ENST00000272238,ENST00000381661,NM_001039362,NM_144583,uc002ras.2,uc002rat.2_5end | |||
|description=CAGE_peak_1_at_ATP6V1C2_5end | |||
|id=chr2:10861749..10861762,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.55e-09!7;CL:0000586!1.55e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.12e-19;7!CL:0000586;2.12e-19;7!CL:0002586;2.07e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.08e-19,7;CL:0000586,2.08e-19,7;CL:0002586,1.92e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;9.56e-07;22!DOID:2994;9.56e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,9.49e-07,22;DOID:2994,9.49e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.79e-10!11;UBERON:0007023!8.63e-08!115;UBERON:0001044!1.72e-07!6;UBERON:0003293!1.72e-07!6;UBERON:0003294!1.72e-07!6;UBERON:0010047!1.72e-07!6;UBERON:0000167!1.72e-07!6;UBERON:0003101!3.06e-07!22;UBERON:0000079!3.06e-07!22;UBERON:0000473!4.49e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;3.61e-15;11!UBERON:0000966;5.17e-13;5!UBERON:0005388;5.17e-13;5!UBERON:0001802;5.17e-13;5!UBERON:0001044;4.59e-11;6!UBERON:0003293;4.59e-11;6!UBERON:0003294;4.59e-11;6!UBERON:0010047;4.59e-11;6!UBERON:0003408;4.59e-11;6!UBERON:0000167;4.59e-11;6!UBERON:0006947;2.49e-09;3!UBERON:0004054;2.49e-09;3!UBERON:0000473;1.32e-08;8!UBERON:0001781;2.07e-08;3!UBERON:0001782;2.07e-08;3!UBERON:0005904;4.58e-07;4!UBERON:0003101;8.50e-07;22!UBERON:0000079;8.50e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.69e-15,11;UBERON:0001044,4.86e-11,6;UBERON:0003293,4.86e-11,6;UBERON:0003294,4.86e-11,6;UBERON:0010047,4.86e-11,6;UBERON:0000167,4.86e-11,6;UBERON:0000966,7.09e-11,6;UBERON:0005388,7.09e-11,6;UBERON:0001802,7.09e-11,6;UBERON:0006947,2.46e-09,3;UBERON:0004054,2.46e-09,3;UBERON:0003408,7.44e-09,10;UBERON:0000473,1.30e-08,8;UBERON:0001782,1.92e-08,3;UBERON:0005424,1.92e-08,3;UBERON:0000166,3.31e-08,22;UBERON:0000153,6.75e-08,62;UBERON:0007811,6.75e-08,62;UBERON:0003133,1.29e-07,48;UBERON:0001444,2.81e-07,49;UBERON:0005904,4.54e-07,4;UBERON:0004175,5.97e-07,25;UBERON:0003101,8.59e-07,22;UBERON:0000079,8.59e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0,0.56738522469114,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,3.44045905312706,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0.397589304964456,1.2781333715647,3.52447587052259,0.252320850875628,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.73217913656106,0,0.439001141634502,1.1240175325762,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.6312121671319,0.063497894292169,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0.460404944679482,0,0,0,0,0,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,3.59030175162945,3.93617574839647,2.27764876265012,19.2686691781241,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.384380134730212,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,20.1467733662307,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,1.88015874927628,0,0,0,0.201799707191048,0,0,2.45792611446766,1.78940886313933,0.834245708559542,0,0,0,0,0,0,0.37428108081644,0.73254089635947,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0.269605053441981,1.25314822272926,1.02314474045374,0,0,0,0,0,0,1.04171104434093,0,0,3.52759689685049,0,0.709163045303809,1.03423011972439,0.291604613383254,0,0,0,0,0,0,0,0,0,3.61666214967846,0,87.6142836674629,26.2989898120632,34.9844537588866,0.957003479195758,0.274792780205587,3.73124343213044,0,0,0,0,0,0,0,0,0,0.163232808159148,0.565412285735763,0.432777279484182,0.995261931078505,0.265372693510018,1.22206028986725,0,0,0,0.202203398942031,0.802577647298789,0,0.547364367646998,8.02224937621568,0,49.3230503561738,2.41981432097328,0,0.063186579628488,0.60129367765797,0.103688191397247,0,0,0,0,0.284609546029793,0,26.0339607502696,0,0,17.647393492445,0,0,0,0,2.03676934625681,0,13.1068829652709,0,0,0.0633107959558787,6.2576442475137,0,0,0.19980960958213,0,0,0,0,0,1.88555227693436,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,2.79550600698588,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,2.0247650239635,8.51182150013745,0.0607495566580247,1.67717343799633,8.03818214451821,3.25218446436988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0.592834895693833,0,0,0,1.2534494701135,0,0,0.471162288750703,0,0.122026264901963,0.250381861413,0,0,0.0620964029413835,0.691743174681154,0,1.21319294033318,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.327130788511688,0,0,0.211312123358627,0,0.640150378164845,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0,0,0,0,28.9025822201964,0,0,0,0,0,0.0752103283492573,0,0,56.8337527024687,0,0.147856086217045,0.270150338473579,0,0,0.0634158101939068,0,1.64477330057155,3.47347824872506,0,0.255524855279191,1.07140367175657,0,0.606965604236632,5.69155478378244,38.1420191699347,0.115233987555779,0,0,0.0657727735628491,0.118193840883968,0,0.627944742804112,0,1.40136081656895,0,0,0,67.9027169678235,1.73814972905999,0,0,0,0.62164849248911,1.19502933965765,32.4892041052623,36.9995528585439,0,0,13.5483856061097,1.60374807980835,0,0,0.111855431797792,0,0,0,0,0,7.77137588894623,1.16969731731053,0.397901550322736,0,0.22589216407792,0.219881033490858,2.71733118420012,0.0771741581079447,0.655678681511872,6.1141248526998,0,0.471353094203252,0.392616934229891,0,0.4226557275834,0,0.0939839179798536,0.515663103788617,0,0.535661815816973,0,0,0,36.2396133889587,0,0,0,0,0,0,0,0,0.252332849670158,1.31118686356435,0.126698501011437,14.1764473341355,12.2920006422158,32.6226893348699,4.76344324655513,0.454672189309436,0.535928260312357,0,0,2.98527574661373,1.90451545170992,0.452122368852043,1.36564371450887,0,0,0.606351566874658,5.87835219321796,3.76456631193809,3.0308423856564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| |||
|short_description=p1@ATP6V1C2 | |||
}} |
Revision as of 12:52, 12 September 2013
Short description: | p1@ATP6V1C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ATP6V1C2_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000272238, ENST00000381661, NM_001039362, NM_144583, uc002ras.2, uc002rat.2_5end |
EntrezGene: | ATP6V1C2 |
HGNC: | 18264 |
UniProt: | Q8NEY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.08e-19 | 7 |
germ cell | 2.08e-19 | 7 |
retinal pigment epithelial cell | 1.92e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 3.69e-15 | 11 |
saliva-secreting gland | 4.86e-11 | 6 |
gland of oral region | 4.86e-11 | 6 |
gland of foregut | 4.86e-11 | 6 |
oral gland | 4.86e-11 | 6 |
oral cavity | 4.86e-11 | 6 |
retina | 7.09e-11 | 6 |
photoreceptor array | 7.09e-11 | 6 |
posterior segment of eyeball | 7.09e-11 | 6 |
male genital duct | 2.46e-09 | 3 |
internal male genitalia | 2.46e-09 | 3 |
gland of gut | 7.44e-09 | 10 |
testis | 1.30e-08 | 8 |
pigmented layer of retina | 1.92e-08 | 3 |
presumptive retinal pigmented epithelium | 1.92e-08 | 3 |
oral opening | 3.31e-08 | 22 |
anterior region of body | 6.75e-08 | 62 |
craniocervical region | 6.75e-08 | 62 |
reproductive organ | 1.29e-07 | 48 |
subdivision of head | 2.81e-07 | 49 |
duct of male reproductive system | 4.54e-07 | 4 |
internal genitalia | 5.97e-07 | 25 |
male organism | 8.59e-07 | 22 |
male reproductive system | 8.59e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 9.49e-07 | 22 |
germ cell cancer | 9.49e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.