FFCP PHASE1:Hg19::chr19:54887674..54887700,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C687|description=CAGE_peak_at_chr19:54887674..54887700,-|id=chr19:54887674..54887700,-|ontology_enrichment_celltype=CL:0002057!9.34e-56!42;CL:0002194!3.37e-55!63;CL:0000576!3.37e-55!63;CL:0000040!3.37e-55!63;CL:0000559!3.37e-55!63;CL:0002009!5.46e-53!65;CL:0000766!6.12e-53!76;CL:0000839!6.93e-52!70;CL:0000860!4.48e-51!45;CL:0000557!6.51e-51!71;CL:0000763!3.10e-41!112;CL:0000049!3.10e-41!112;CL:0000738!1.39e-27!140;CL:0000037!2.49e-26!172;CL:0000566!2.49e-26!172;CL:0002087!2.57e-26!119;CL:0002031!3.10e-24!124;CL:0000988!9.35e-24!182;CL:0002032!9.61e-24!165;CL:0000837!9.61e-24!165;CL:0002393!1.26e-09!9;CL:0002397!1.26e-09!9|ontology_enrichment_celltype_v019=CL:0000473;1.46e-77;39!CL:0000234;1.46e-77;39!CL:0000860;1.22e-74;33!CL:0002057;1.22e-74;33!CL:0000576;1.31e-47;48!CL:0000766;6.04e-32;69!CL:0000763;3.42e-20;100!CL:0000235;8.00e-20;6!CL:0002619;9.18e-16;3!CL:0000784;2.58e-14;3!CL:0002087;4.13e-13;104!CL:0000738;8.17e-11;136|ontology_enrichment_celltype_v019_2=CL:0002194,4.48e-90,59;CL:0000576,4.48e-90,59;CL:0000040,4.48e-90,59;CL:0000559,4.48e-90,59;CL:0000473,2.50e-88,48;CL:0000234,2.50e-88,48;CL:0002009,6.17e-87,61;CL:0000839,6.59e-80,66;CL:0000557,1.26e-78,67;CL:0000766,9.63e-73,72;CL:0000860,2.20e-70,42;CL:0002057,2.20e-70,42;CL:0000763,1.70e-55,108;CL:0000049,1.70e-55,108;CL:0002087,4.60e-43,115;CL:0002031,5.58e-41,120;CL:0000738,4.68e-40,136;CL:0000037,2.80e-37,168;CL:0000988,5.31e-35,177;CL:0002032,7.57e-35,161;CL:0000837,7.57e-35,161;CL:0000235,7.72e-20,6;CL:0002619,8.34e-16,3;CL:0000784,3.74e-14,3;CL:0000134,1.34e-13,354;CL:0002320,3.52e-13,361;CL:0000219,1.05e-11,386;CL:0000034,3.98e-10,441;CL:0000048,6.76e-10,427;CL:0000723,1.20e-09,433|ontology_enrichment_development_v019=CL:0002057;3.11e-52;42!CL:0000049;9.30e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.96e-43!80;UBERON:0002390!1.62e-42!102;UBERON:0003061!1.62e-42!102;UBERON:0001474!4.78e-39!86;UBERON:0002193!1.97e-38!112;UBERON:0004765!4.48e-32!101;UBERON:0001434!4.48e-32!101;UBERON:0002405!3.84e-31!115;UBERON:0007023!2.97e-21!115;UBERON:0002204!2.06e-14!167;UBERON:0003081!2.88e-13!216;UBERON:0001049!1.58e-11!57;UBERON:0005068!1.58e-11!57;UBERON:0006241!1.58e-11!57;UBERON:0007135!1.58e-11!57;UBERON:0002780!1.97e-10!41;UBERON:0001890!1.97e-10!41;UBERON:0006240!1.97e-10!41;UBERON:0003080!4.67e-10!42;UBERON:0002616!8.52e-10!59;UBERON:0002020!1.72e-09!34;UBERON:0003528!1.72e-09!34;UBERON:0001893!1.88e-09!34;UBERON:0002308!4.73e-09!9;UBERON:0000125!4.73e-09!9;UBERON:0002791!9.37e-09!33;UBERON:0000062!1.44e-08!511;UBERON:0000955!5.57e-08!69;UBERON:0006238!5.57e-08!69;UBERON:0001869!7.20e-08!32;UBERON:0005743!3.08e-07!86;UBERON:0001017!3.41e-07!82;UBERON:0002420!3.44e-07!9;UBERON:0007245!3.44e-07!9;UBERON:0010009!3.44e-07!9;UBERON:0010011!3.44e-07!9;UBERON:0000454!3.44e-07!9;UBERON:0009663!4.92e-07!7;UBERON:0003075!8.91e-07!86;UBERON:0007284!8.91e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-68,76;UBERON:0001474,4.22e-63,82;UBERON:0004765,6.53e-57,90;UBERON:0002405,7.33e-55,93;UBERON:0002390,1.01e-51,98;UBERON:0003061,1.01e-51,98;UBERON:0001434,1.50e-50,100;UBERON:0002193,2.66e-46,108;UBERON:0002204,1.91e-27,167;UBERON:0003081,2.75e-21,203;UBERON:0002384,1.31e-12,371;UBERON:0000926,5.03e-12,315;UBERON:0004120,5.03e-12,315;UBERON:0006603,5.03e-12,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.77408061658038,0,0,0,0,0,0,3.32397245119126,0.401088894940283,0.217010870715852,5.82180233023803,3.88672399222775,7.46969146139141,0.290796477559129,0,0.970336244751265,7.90258725479328,4.11167888021826,0.929119112685311,1.43846196161075,2.81776777182011,3.31075121844019,4.13694816883942,3.87290810150296,1.35426486594342,2.44715041405386,0.818718450173537,1.12361742222542,7.34601341690166,4.8139354061414,1.91801137739712,2.96866170168044,1.99463657621632,1.70489900213078,4.64334781805734,2.26954089876456,2.4912889959823,1.00499466102697,1.0429658368404,1.52032191293582,6.65939452896706,2.94622108790052,3.16462387440884,0.211255286311942,0.637812899895131,0.419317291016752,0.22465726229299,0.150176892841506,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,1.19245312152671,2.28797964312051,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C687 | |||
|description=CAGE_peak_at_chr19:54887674..54887700,- | |||
|id=chr19:54887674..54887700,- | |||
|ontology_enrichment_celltype=CL:0002057!9.34e-56!42;CL:0002194!3.37e-55!63;CL:0000576!3.37e-55!63;CL:0000040!3.37e-55!63;CL:0000559!3.37e-55!63;CL:0002009!5.46e-53!65;CL:0000766!6.12e-53!76;CL:0000839!6.93e-52!70;CL:0000860!4.48e-51!45;CL:0000557!6.51e-51!71;CL:0000763!3.10e-41!112;CL:0000049!3.10e-41!112;CL:0000738!1.39e-27!140;CL:0000037!2.49e-26!172;CL:0000566!2.49e-26!172;CL:0002087!2.57e-26!119;CL:0002031!3.10e-24!124;CL:0000988!9.35e-24!182;CL:0002032!9.61e-24!165;CL:0000837!9.61e-24!165;CL:0002393!1.26e-09!9;CL:0002397!1.26e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.46e-77;39!CL:0000234;1.46e-77;39!CL:0000860;1.22e-74;33!CL:0002057;1.22e-74;33!CL:0000576;1.31e-47;48!CL:0000766;6.04e-32;69!CL:0000763;3.42e-20;100!CL:0000235;8.00e-20;6!CL:0002619;9.18e-16;3!CL:0000784;2.58e-14;3!CL:0002087;4.13e-13;104!CL:0000738;8.17e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.48e-90,59;CL:0000576,4.48e-90,59;CL:0000040,4.48e-90,59;CL:0000559,4.48e-90,59;CL:0000473,2.50e-88,48;CL:0000234,2.50e-88,48;CL:0002009,6.17e-87,61;CL:0000839,6.59e-80,66;CL:0000557,1.26e-78,67;CL:0000766,9.63e-73,72;CL:0000860,2.20e-70,42;CL:0002057,2.20e-70,42;CL:0000763,1.70e-55,108;CL:0000049,1.70e-55,108;CL:0002087,4.60e-43,115;CL:0002031,5.58e-41,120;CL:0000738,4.68e-40,136;CL:0000037,2.80e-37,168;CL:0000988,5.31e-35,177;CL:0002032,7.57e-35,161;CL:0000837,7.57e-35,161;CL:0000235,7.72e-20,6;CL:0002619,8.34e-16,3;CL:0000784,3.74e-14,3;CL:0000134,1.34e-13,354;CL:0002320,3.52e-13,361;CL:0000219,1.05e-11,386;CL:0000034,3.98e-10,441;CL:0000048,6.76e-10,427;CL:0000723,1.20e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.11e-52;42!CL:0000049;9.30e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.96e-43!80;UBERON:0002390!1.62e-42!102;UBERON:0003061!1.62e-42!102;UBERON:0001474!4.78e-39!86;UBERON:0002193!1.97e-38!112;UBERON:0004765!4.48e-32!101;UBERON:0001434!4.48e-32!101;UBERON:0002405!3.84e-31!115;UBERON:0007023!2.97e-21!115;UBERON:0002204!2.06e-14!167;UBERON:0003081!2.88e-13!216;UBERON:0001049!1.58e-11!57;UBERON:0005068!1.58e-11!57;UBERON:0006241!1.58e-11!57;UBERON:0007135!1.58e-11!57;UBERON:0002780!1.97e-10!41;UBERON:0001890!1.97e-10!41;UBERON:0006240!1.97e-10!41;UBERON:0003080!4.67e-10!42;UBERON:0002616!8.52e-10!59;UBERON:0002020!1.72e-09!34;UBERON:0003528!1.72e-09!34;UBERON:0001893!1.88e-09!34;UBERON:0002308!4.73e-09!9;UBERON:0000125!4.73e-09!9;UBERON:0002791!9.37e-09!33;UBERON:0000062!1.44e-08!511;UBERON:0000955!5.57e-08!69;UBERON:0006238!5.57e-08!69;UBERON:0001869!7.20e-08!32;UBERON:0005743!3.08e-07!86;UBERON:0001017!3.41e-07!82;UBERON:0002420!3.44e-07!9;UBERON:0007245!3.44e-07!9;UBERON:0010009!3.44e-07!9;UBERON:0010011!3.44e-07!9;UBERON:0000454!3.44e-07!9;UBERON:0009663!4.92e-07!7;UBERON:0003075!8.91e-07!86;UBERON:0007284!8.91e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-68,76;UBERON:0001474,4.22e-63,82;UBERON:0004765,6.53e-57,90;UBERON:0002405,7.33e-55,93;UBERON:0002390,1.01e-51,98;UBERON:0003061,1.01e-51,98;UBERON:0001434,1.50e-50,100;UBERON:0002193,2.66e-46,108;UBERON:0002204,1.91e-27,167;UBERON:0003081,2.75e-21,203;UBERON:0002384,1.31e-12,371;UBERON:0000926,5.03e-12,315;UBERON:0004120,5.03e-12,315;UBERON:0006603,5.03e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.77408061658038,0,0,0,0,0,0,3.32397245119126,0.401088894940283,0.217010870715852,5.82180233023803,3.88672399222775,7.46969146139141,0.290796477559129,0,0.970336244751265,7.90258725479328,4.11167888021826,0.929119112685311,1.43846196161075,2.81776777182011,3.31075121844019,4.13694816883942,3.87290810150296,1.35426486594342,2.44715041405386,0.818718450173537,1.12361742222542,7.34601341690166,4.8139354061414,1.91801137739712,2.96866170168044,1.99463657621632,1.70489900213078,4.64334781805734,2.26954089876456,2.4912889959823,1.00499466102697,1.0429658368404,1.52032191293582,6.65939452896706,2.94622108790052,3.16462387440884,0.211255286311942,0.637812899895131,0.419317291016752,0.22465726229299,0.150176892841506,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,1.19245312152671,2.28797964312051,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0,2.0808362720422,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,2.00902836572851,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0.649243880549111,0,1.82587743226554,0,0,0,0.321176150207399,1.00899853595524,0.851692475380653,0,0.307240764308458,0,0,0.586164286206121,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.276283915531148,0,0,0,0,0,0,4.09257896181497,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0.1251909307065,0,0.554645257684261,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0.336283722218824,0,0.455324382702595,0.443511850813194,0,0,0.339848664884159,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,1.48523200163543,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0.573358332605805,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.724030971033267,0.426467963801962,0,0.322944549180031,0.31037357147929,0,0.0636471582781649,0.202117188958219,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p@chr19:54887674..54887700,- | |||
}} |
Revision as of 22:20, 11 September 2013
Short description: | p@chr19:54887674..54887700, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:54887674..54887700, - |
Coexpression cluster: | C687_CD14_Macrophage_Monocytederived_Dendritic_Endothelial_Pericytes_schwannoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-68 | 76 |
bone element | 4.22e-63 | 82 |
skeletal element | 6.53e-57 | 90 |
immune system | 7.33e-55 | 93 |
hematopoietic system | 1.01e-51 | 98 |
blood island | 1.01e-51 | 98 |
skeletal system | 1.50e-50 | 100 |
hemolymphoid system | 2.66e-46 | 108 |
musculoskeletal system | 1.91e-27 | 167 |
lateral plate mesoderm | 2.75e-21 | 203 |
connective tissue | 1.31e-12 | 371 |
mesoderm | 5.03e-12 | 315 |
mesoderm-derived structure | 5.03e-12 | 315 |
presumptive mesoderm | 5.03e-12 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.