FFCP PHASE1:Hg19::chr19:52264268..52264290,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2358|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3827|TSSclassifier=S|UniProt=P25090|association_with_transcript=85bp_to_ENST00000340023_5end|coexpression_cluster_id=C65|description=CAGE_peak_3_at_FPR2_5end|id=chr19:52264268..52264290,+|ontology_enrichment_celltype=CL:0002057!2.05e-101!42;CL:0000860!7.08e-94!45;CL:0000766!5.97e-71!76;CL:0002009!4.56e-70!65;CL:0002194!3.79e-69!63;CL:0000576!3.79e-69!63;CL:0000040!3.79e-69!63;CL:0000559!3.79e-69!63;CL:0000557!3.27e-63!71;CL:0000839!3.79e-61!70;CL:0000763!2.25e-46!112;CL:0000049!2.25e-46!112;CL:0000738!2.22e-43!140;CL:0002087!2.39e-40!119;CL:0002031!1.04e-34!124;CL:0000037!8.52e-33!172;CL:0000566!8.52e-33!172;CL:0002032!2.90e-30!165;CL:0000837!2.90e-30!165;CL:0000988!2.98e-30!182;CL:0002393!1.04e-14!9;CL:0002397!1.04e-14!9;CL:0000134!1.53e-09!358;CL:0000875!2.20e-09!3;CL:0002396!2.20e-09!3;CL:0002320!4.09e-09!365;CL:0000775!6.29e-09!3;CL:0000094!2.23e-08!8;CL:0000842!5.18e-08!3;CL:0000219!1.26e-07!390|ontology_enrichment_celltype_v019=CL:0000860;9.37e-113;33!CL:0002057;9.37e-113;33!CL:0000473;6.99e-78;39!CL:0000234;6.99e-78;39!CL:0000576;1.07e-74;48!CL:0000766;3.01e-47;69!CL:0000763;1.23e-22;100!CL:0002087;1.12e-17;104!CL:0000875;8.40e-15;3!CL:0002396;8.40e-15;3!CL:0000775;5.92e-14;3!CL:0000738;5.99e-14;136!CL:0000094;2.90e-09;8!CL:0002393;1.50e-07;6!CL:0002397;1.50e-07;6!CL:0000988;2.30e-07;177!CL:0000219;4.46e-07;193!CL:0000081;9.25e-07;11|ontology_enrichment_celltype_v019_2=CL:0000860,5.33e-140,42;CL:0002057,5.33e-140,42;CL:0000473,1.36e-121,48;CL:0000234,1.36e-121,48;CL:0000766,1.53e-96,72;CL:0002194,8.09e-96,59;CL:0000576,8.09e-96,59;CL:0000040,8.09e-96,59;CL:0000559,8.09e-96,59;CL:0002009,1.72e-92,61;CL:0000839,4.83e-85,66;CL:0000557,1.10e-83,67;CL:0000763,3.77e-62,108;CL:0000049,3.77e-62,108;CL:0000738,7.02e-48,136;CL:0002087,5.39e-46,115;CL:0002031,8.72e-44,120;CL:0002032,2.68e-39,161;CL:0000837,2.68e-39,161;CL:0000037,2.38e-37,168;CL:0000988,4.56e-35,177;CL:0002393,2.87e-18,9;CL:0002397,2.87e-18,9;CL:0000875,9.68e-15,3;CL:0002396,9.68e-15,3;CL:0000775,5.65e-14,3;CL:0000134,1.24e-13,354;CL:0002320,3.27e-13,361;CL:0000219,9.84e-12,386;CL:0000048,6.36e-10,427;CL:0000723,1.13e-09,433;CL:0000034,2.38e-09,441;CL:0000094,2.80e-09,8;CL:0000081,9.04e-07,11|ontology_enrichment_development_v019=CL:0002057;1.14e-101;42!CL:0000049;4.88e-22;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.72e-67!102;UBERON:0003061!5.72e-67!102;UBERON:0002193!2.58e-62!112;UBERON:0002371!7.77e-55!80;UBERON:0001474!3.23e-50!86;UBERON:0002405!2.36e-44!115;UBERON:0004765!4.67e-41!101;UBERON:0001434!4.67e-41!101;UBERON:0003081!1.20e-25!216;UBERON:0002204!1.68e-21!167;UBERON:0000178!8.74e-10!15;UBERON:0000179!8.74e-10!15;UBERON:0000463!8.74e-10!15;UBERON:0000926!1.50e-08!448;UBERON:0004120!1.50e-08!448;UBERON:0006603!1.50e-08!448;UBERON:0002384!1.55e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.81e-73,76;UBERON:0001474,3.13e-67,82;UBERON:0002390,2.57e-65,98;UBERON:0003061,2.57e-65,98;UBERON:0004765,1.14e-60,90;UBERON:0002193,1.26e-58,108;UBERON:0002405,1.69e-58,93;UBERON:0001434,6.25e-54,100;UBERON:0002204,1.94e-29,167;UBERON:0003081,9.73e-28,203;UBERON:0000926,4.05e-15,315;UBERON:0004120,4.05e-15,315;UBERON:0006603,4.05e-15,315;UBERON:0002384,1.22e-12,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,10.6140714309082,5.29026321164333,4.36651310138069,10.4593066607558,2.87817521615278,4.33588919253145,11.507695692886,5.12321413058201,9.69577142543199,12.4108445065183,4.51839278508678,2.70852973188684,24.0950194614534,10.0975275521403,20.2251136000576,33.3631442684284,13.4790191371959,18.5407766481722,14.5134572082155,8.57693727773017,8.52449501065388,13.930043454172,2.26954089876456,3.73693349397345,10.3011952755265,4.17186334736161,4.34377689410233,12.1079900526674,1.84138817993782,2.84816148696796,5.91514801673437,5.74031609905618,3.56419697364239,0.786300418025466,0.450530678524519,0.16072558669708,5.41524213108372,7.35991705636633,4.01861138282195,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3827 | |||
|TSSclassifier=S | |||
|UniProt=P25090 | |||
|association_with_transcript=85bp_to_ENST00000340023_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_3_at_FPR2_5end | |||
|id=chr19:52264268..52264290,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.05e-101!42;CL:0000860!7.08e-94!45;CL:0000766!5.97e-71!76;CL:0002009!4.56e-70!65;CL:0002194!3.79e-69!63;CL:0000576!3.79e-69!63;CL:0000040!3.79e-69!63;CL:0000559!3.79e-69!63;CL:0000557!3.27e-63!71;CL:0000839!3.79e-61!70;CL:0000763!2.25e-46!112;CL:0000049!2.25e-46!112;CL:0000738!2.22e-43!140;CL:0002087!2.39e-40!119;CL:0002031!1.04e-34!124;CL:0000037!8.52e-33!172;CL:0000566!8.52e-33!172;CL:0002032!2.90e-30!165;CL:0000837!2.90e-30!165;CL:0000988!2.98e-30!182;CL:0002393!1.04e-14!9;CL:0002397!1.04e-14!9;CL:0000134!1.53e-09!358;CL:0000875!2.20e-09!3;CL:0002396!2.20e-09!3;CL:0002320!4.09e-09!365;CL:0000775!6.29e-09!3;CL:0000094!2.23e-08!8;CL:0000842!5.18e-08!3;CL:0000219!1.26e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.37e-113;33!CL:0002057;9.37e-113;33!CL:0000473;6.99e-78;39!CL:0000234;6.99e-78;39!CL:0000576;1.07e-74;48!CL:0000766;3.01e-47;69!CL:0000763;1.23e-22;100!CL:0002087;1.12e-17;104!CL:0000875;8.40e-15;3!CL:0002396;8.40e-15;3!CL:0000775;5.92e-14;3!CL:0000738;5.99e-14;136!CL:0000094;2.90e-09;8!CL:0002393;1.50e-07;6!CL:0002397;1.50e-07;6!CL:0000988;2.30e-07;177!CL:0000219;4.46e-07;193!CL:0000081;9.25e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.33e-140,42;CL:0002057,5.33e-140,42;CL:0000473,1.36e-121,48;CL:0000234,1.36e-121,48;CL:0000766,1.53e-96,72;CL:0002194,8.09e-96,59;CL:0000576,8.09e-96,59;CL:0000040,8.09e-96,59;CL:0000559,8.09e-96,59;CL:0002009,1.72e-92,61;CL:0000839,4.83e-85,66;CL:0000557,1.10e-83,67;CL:0000763,3.77e-62,108;CL:0000049,3.77e-62,108;CL:0000738,7.02e-48,136;CL:0002087,5.39e-46,115;CL:0002031,8.72e-44,120;CL:0002032,2.68e-39,161;CL:0000837,2.68e-39,161;CL:0000037,2.38e-37,168;CL:0000988,4.56e-35,177;CL:0002393,2.87e-18,9;CL:0002397,2.87e-18,9;CL:0000875,9.68e-15,3;CL:0002396,9.68e-15,3;CL:0000775,5.65e-14,3;CL:0000134,1.24e-13,354;CL:0002320,3.27e-13,361;CL:0000219,9.84e-12,386;CL:0000048,6.36e-10,427;CL:0000723,1.13e-09,433;CL:0000034,2.38e-09,441;CL:0000094,2.80e-09,8;CL:0000081,9.04e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-101;42!CL:0000049;4.88e-22;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.72e-67!102;UBERON:0003061!5.72e-67!102;UBERON:0002193!2.58e-62!112;UBERON:0002371!7.77e-55!80;UBERON:0001474!3.23e-50!86;UBERON:0002405!2.36e-44!115;UBERON:0004765!4.67e-41!101;UBERON:0001434!4.67e-41!101;UBERON:0003081!1.20e-25!216;UBERON:0002204!1.68e-21!167;UBERON:0000178!8.74e-10!15;UBERON:0000179!8.74e-10!15;UBERON:0000463!8.74e-10!15;UBERON:0000926!1.50e-08!448;UBERON:0004120!1.50e-08!448;UBERON:0006603!1.50e-08!448;UBERON:0002384!1.55e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.81e-73,76;UBERON:0001474,3.13e-67,82;UBERON:0002390,2.57e-65,98;UBERON:0003061,2.57e-65,98;UBERON:0004765,1.14e-60,90;UBERON:0002193,1.26e-58,108;UBERON:0002405,1.69e-58,93;UBERON:0001434,6.25e-54,100;UBERON:0002204,1.94e-29,167;UBERON:0003081,9.73e-28,203;UBERON:0000926,4.05e-15,315;UBERON:0004120,4.05e-15,315;UBERON:0006603,4.05e-15,315;UBERON:0002384,1.22e-12,371 | |||
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|short_description=p3@FPR2 | |||
}} |
Revision as of 22:08, 11 September 2013
Short description: | p3@FPR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FPR2_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 85bp_to_ENST00000340023_5end |
EntrezGene: | FPR2 |
HGNC: | 3827 |
UniProt: | P25090 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.81e-73 | 76 |
bone element | 3.13e-67 | 82 |
hematopoietic system | 2.57e-65 | 98 |
blood island | 2.57e-65 | 98 |
skeletal element | 1.14e-60 | 90 |
hemolymphoid system | 1.26e-58 | 108 |
immune system | 1.69e-58 | 93 |
skeletal system | 6.25e-54 | 100 |
musculoskeletal system | 1.94e-29 | 167 |
lateral plate mesoderm | 9.73e-28 | 203 |
mesoderm | 4.05e-15 | 315 |
mesoderm-derived structure | 4.05e-15 | 315 |
presumptive mesoderm | 4.05e-15 | 315 |
connective tissue | 1.22e-12 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.