FFCP PHASE1:Hg19::chr19:46000506..46000536,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=147699|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26845|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000396737_5end|description=CAGE_peak_2_at_PPM1N_5end|id=chr19:46000506..46000536,+|ontology_enrichment_celltype=CL:0002009!1.08e-10!65;CL:0000557!1.49e-10!71;CL:0000763!5.39e-10!112;CL:0000049!5.39e-10!112;CL:0002194!1.12e-09!63;CL:0000576!1.12e-09!63;CL:0000040!1.12e-09!63;CL:0000559!1.12e-09!63;CL:0000839!1.54e-09!70;CL:0000766!5.41e-09!76|ontology_enrichment_celltype_v019=CL:0000235;9.71e-15;6!CL:0000875;6.83e-09;3!CL:0002396;6.83e-09;3|ontology_enrichment_celltype_v019_2=CL:0002009,2.96e-15,61;CL:0000235,7.95e-15,6;CL:0000557,2.49e-13,67;CL:0002194,8.19e-13,59;CL:0000576,8.19e-13,59;CL:0000040,8.19e-13,59;CL:0000559,8.19e-13,59;CL:0000763,2.72e-12,108;CL:0000049,2.72e-12,108;CL:0000839,7.18e-11,66;CL:0000766,1.15e-10,72;CL:0000473,9.18e-10,48;CL:0000234,9.18e-10,48;CL:0002393,6.36e-09,9;CL:0002397,6.36e-09,9;CL:0000875,6.93e-09,3;CL:0002396,6.93e-09,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!7.67e-09!235;DOID:14566!1.27e-08!239;DOID:0050686!6.71e-07!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!9.46e-12!86;UBERON:0002371!5.16e-11!80;UBERON:0004765!6.09e-09!101;UBERON:0001434!6.09e-09!101;UBERON:0002390!2.91e-08!102;UBERON:0003061!2.91e-08!102;UBERON:0000062!2.27e-07!511;UBERON:0002405!9.09e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.87e-14,82;UBERON:0002371,2.32e-13,76;UBERON:0004765,1.61e-12,90;UBERON:0001434,1.49e-10,100;UBERON:0002405,1.03e-09,93;UBERON:0002390,6.77e-09,98;UBERON:0003061,6.77e-09,98;UBERON:0002204,3.29e-08,167;UBERON:0002193,1.68e-07,108|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0,0,0.737201809504527,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0.286235987131057,0,0,0.305653622991805,0.246301768349837,0.314843125254717,1.96682138424452,0.767658796194425,0.77408061658038,0,0.30120591877825,0.369754010166788,0.852139206383318,0.142169232487422,0,0,0.200544447470142,0.651032612147555,0.671746422719773,0.971680998056939,1.80302897343931,0.581592955118259,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,1.12945403725563,0.545812300115692,0.449446968890169,0,0,2.55734850319616,0.659702600373432,1.19678194572979,0,0.580418477257168,0,1.24564449799115,1.00499466102697,0.521482918420201,0.65156653411535,0,0.368277635987565,0.316462387440884,1.05627643155971,1.27562579979026,1.04829322754188,0.561643155732475,0.150176892841506,0.64290234678832,7.12531859353121,5.37075028437543,6.57590953552682,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.384273959177026,0,0,0,0.579606171470105,0,0,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0,0,0.434473211648397,2.43806866313962,1.34140171940727,0.767175371061182,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.196468613246569,0.364295288292542,0,0.324547393654683,0.348259474598534,1.06366368415092,0,0,0,0.198762407366705,0,0,0,1.67799774483962,0.825354125820202,0,0,0.71153252537342,0,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,1.19168262731897,0.573673241497627,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0.538842688278752,0.163461903113459,0.151357427644931,0,0,0,0,0.597794722207204,0,0,0.280901613404497,0,0.737005903870608,0.206651562351531,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.300476117813194,0.567160915800105,0,0,0.423863802319124,0,0.206105058476878,0,0.558350568994769,0.675105328965065,0.389748020644795,0.252433774244115,0.368199594569197,1.77810662500693,0,0.201504196455281,0.847802961552438,0.966304265816484,1.09098448236334,1.43402297694502,0.365921118388786,0,0.232387885739037,0,0.504641701751257,0,0,0,1.38134921352481,0.928735856063958,0,0.118306800039844,0,0.482022059766964,0.55146986366197,0,0.237270619111097,0.539325232640658,0.196221465125346,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.439001141634502,0,0.603173834469785,0.185176890317059,0,0,0,0,0,0,0,0,0,1.71697232418975,1.47730203652438,1.17002132569619,2.82399208348584,0,0.16798212819886,0.708875486211932,0,0,0,0.492663237895943,0.44024217006613,0.207328115540772,0.432359860250884,0.12624243342638,1.20645999155121,0.763976851116555,1.17217447210047,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0.43596006883328,0.07333828582095,0,0,0,0.531876233169741,0,0.771622122786426,0,0.799266537048298,0.428933980974443,0.542621605391443,0,0.325736184293735,0.710783897485092,0,0.904318131178758,0,0.799783929456456,4.86495122564762,3.51579964002488,8.43335757932127,0.239624855491583,0,0,0,0.20547632255038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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=147699 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26845 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000396737_5end | |||
|description=CAGE_peak_2_at_PPM1N_5end | |||
|id=chr19:46000506..46000536,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.08e-10!65;CL:0000557!1.49e-10!71;CL:0000763!5.39e-10!112;CL:0000049!5.39e-10!112;CL:0002194!1.12e-09!63;CL:0000576!1.12e-09!63;CL:0000040!1.12e-09!63;CL:0000559!1.12e-09!63;CL:0000839!1.54e-09!70;CL:0000766!5.41e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000235;9.71e-15;6!CL:0000875;6.83e-09;3!CL:0002396;6.83e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.96e-15,61;CL:0000235,7.95e-15,6;CL:0000557,2.49e-13,67;CL:0002194,8.19e-13,59;CL:0000576,8.19e-13,59;CL:0000040,8.19e-13,59;CL:0000559,8.19e-13,59;CL:0000763,2.72e-12,108;CL:0000049,2.72e-12,108;CL:0000839,7.18e-11,66;CL:0000766,1.15e-10,72;CL:0000473,9.18e-10,48;CL:0000234,9.18e-10,48;CL:0002393,6.36e-09,9;CL:0002397,6.36e-09,9;CL:0000875,6.93e-09,3;CL:0002396,6.93e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.67e-09!235;DOID:14566!1.27e-08!239;DOID:0050686!6.71e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!9.46e-12!86;UBERON:0002371!5.16e-11!80;UBERON:0004765!6.09e-09!101;UBERON:0001434!6.09e-09!101;UBERON:0002390!2.91e-08!102;UBERON:0003061!2.91e-08!102;UBERON:0000062!2.27e-07!511;UBERON:0002405!9.09e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.87e-14,82;UBERON:0002371,2.32e-13,76;UBERON:0004765,1.61e-12,90;UBERON:0001434,1.49e-10,100;UBERON:0002405,1.03e-09,93;UBERON:0002390,6.77e-09,98;UBERON:0003061,6.77e-09,98;UBERON:0002204,3.29e-08,167;UBERON:0002193,1.68e-07,108 | |||
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| |||
|short_description=p2@PPM1N | |||
}} |
Revision as of 21:18, 11 September 2013
Short description: | p2@PPM1N |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PPM1N_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396737_5end |
EntrezGene: | PPM1N |
HGNC: | 26845 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.96e-15 | 61 |
macrophage | 7.95e-15 | 6 |
granulocyte monocyte progenitor cell | 2.49e-13 | 67 |
monopoietic cell | 8.19e-13 | 59 |
monocyte | 8.19e-13 | 59 |
monoblast | 8.19e-13 | 59 |
promonocyte | 8.19e-13 | 59 |
myeloid cell | 2.72e-12 | 108 |
common myeloid progenitor | 2.72e-12 | 108 |
myeloid lineage restricted progenitor cell | 7.18e-11 | 66 |
myeloid leukocyte | 1.15e-10 | 72 |
defensive cell | 9.18e-10 | 48 |
phagocyte | 9.18e-10 | 48 |
intermediate monocyte | 6.36e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.36e-09 | 9 |
non-classical monocyte | 6.93e-09 | 3 |
CD14-low, CD16-positive monocyte | 6.93e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.87e-14 | 82 |
bone marrow | 2.32e-13 | 76 |
skeletal element | 1.61e-12 | 90 |
skeletal system | 1.49e-10 | 100 |
immune system | 1.03e-09 | 93 |
hematopoietic system | 6.77e-09 | 98 |
blood island | 6.77e-09 | 98 |
musculoskeletal system | 3.29e-08 | 167 |
hemolymphoid system | 1.68e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.