FFCP PHASE1:Hg19::chr19:42384711..42384739,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=973|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=1698|TSSclassifier=W|UniProt=P11912|association_with_transcript=-194bp_to_X13451_5end|coexpression_cluster_id=C152|description=CAGE_peak_3_at_CD79A_5end|id=chr19:42384711..42384739,+|ontology_enrichment_celltype=CL:0000945!2.75e-44!24;CL:0000826!2.75e-44!24;CL:0000236!1.39e-37!14;CL:0000838!1.06e-25!52;CL:0000542!3.69e-25!53;CL:0000051!3.69e-25!53;CL:0000817!1.12e-09!3;CL:0002087!1.75e-09!119;CL:0002031!5.47e-09!124;CL:0000946!6.19e-08!1;CL:0000786!6.19e-08!1;CL:0000980!6.19e-08!1;CL:0000738!1.21e-07!140;CL:0002032!4.56e-07!165;CL:0000837!4.56e-07!165|ontology_enrichment_celltype_v019=CL:0000236;1.59e-08;13|ontology_enrichment_celltype_v019_2=CL:0000236,5.75e-08,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:171!7.10e-25!10;DOID:3095!5.15e-11!22;DOID:2994!5.15e-11!22|ontology_enrichment_disease_v019=DOID:171;6.40e-62;10!DOID:3095;1.97e-28;22!DOID:2994;1.97e-28;22!DOID:3193;7.30e-14;2!DOID:962;7.30e-14;2!DOID:1192;1.10e-09;3|ontology_enrichment_disease_v019_2=DOID:171,5.64e-62,10;DOID:3095,1.86e-28,22;DOID:2994,1.86e-28,22;DOID:3193,7.30e-14,2;DOID:962,7.30e-14,2;DOID:1192,1.10e-09,3|ontology_enrichment_uberon=UBERON:0002106!1.59e-09!3;UBERON:0004854!1.59e-09!3;UBERON:0009034!1.59e-09!3;UBERON:0002095!1.59e-09!3;UBERON:0004782!1.59e-09!3;UBERON:0003281!1.59e-09!3;UBERON:0009664!1.59e-09!3;UBERON:0002296!1.59e-09!3;UBERON:0005602!1.59e-09!3;UBERON:0001179!1.59e-09!3;UBERON:0006293!1.59e-09!3;UBERON:0004177!7.70e-09!7;UBERON:0001736!4.11e-08!1;UBERON:0006298!4.11e-08!1;UBERON:0002372!1.14e-07!1;UBERON:0001961!1.14e-07!1;UBERON:0001744!1.14e-07!1;UBERON:0001735!1.14e-07!1|ontology_enrichment_uberon_v019=UBERON:0002346;1.07e-98;4!UBERON:0000923;1.07e-98;4!UBERON:0010316;1.07e-98;4!UBERON:0005291;1.07e-98;4!UBERON:0002050;3.89e-79;5!UBERON:0005423;3.89e-79;5!UBERON:0003714;7.30e-14;2|ontology_enrichment_uberon_v019_2=UBERON:0003714,7.30e-14,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,1.72425731986345,0,0,0.569212969109448,0,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,1.86705782949428,6.58982252315217,8.17976044109414,12.8488331133846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3458368795583,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@CD79A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=973 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1698 | |||
|TSSclassifier=W | |||
|UniProt=P11912 | |||
|association_with_transcript=-194bp_to_X13451_5end | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_3_at_CD79A_5end | |||
|id=chr19:42384711..42384739,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.75e-44!24;CL:0000826!2.75e-44!24;CL:0000236!1.39e-37!14;CL:0000838!1.06e-25!52;CL:0000542!3.69e-25!53;CL:0000051!3.69e-25!53;CL:0000817!1.12e-09!3;CL:0002087!1.75e-09!119;CL:0002031!5.47e-09!124;CL:0000946!6.19e-08!1;CL:0000786!6.19e-08!1;CL:0000980!6.19e-08!1;CL:0000738!1.21e-07!140;CL:0002032!4.56e-07!165;CL:0000837!4.56e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.59e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.75e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!7.10e-25!10;DOID:3095!5.15e-11!22;DOID:2994!5.15e-11!22 | |||
|ontology_enrichment_disease_v019=DOID:171;6.40e-62;10!DOID:3095;1.97e-28;22!DOID:2994;1.97e-28;22!DOID:3193;7.30e-14;2!DOID:962;7.30e-14;2!DOID:1192;1.10e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.64e-62,10;DOID:3095,1.86e-28,22;DOID:2994,1.86e-28,22;DOID:3193,7.30e-14,2;DOID:962,7.30e-14,2;DOID:1192,1.10e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.59e-09!3;UBERON:0004854!1.59e-09!3;UBERON:0009034!1.59e-09!3;UBERON:0002095!1.59e-09!3;UBERON:0004782!1.59e-09!3;UBERON:0003281!1.59e-09!3;UBERON:0009664!1.59e-09!3;UBERON:0002296!1.59e-09!3;UBERON:0005602!1.59e-09!3;UBERON:0001179!1.59e-09!3;UBERON:0006293!1.59e-09!3;UBERON:0004177!7.70e-09!7;UBERON:0001736!4.11e-08!1;UBERON:0006298!4.11e-08!1;UBERON:0002372!1.14e-07!1;UBERON:0001961!1.14e-07!1;UBERON:0001744!1.14e-07!1;UBERON:0001735!1.14e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.07e-98;4!UBERON:0000923;1.07e-98;4!UBERON:0010316;1.07e-98;4!UBERON:0005291;1.07e-98;4!UBERON:0002050;3.89e-79;5!UBERON:0005423;3.89e-79;5!UBERON:0003714;7.30e-14;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,7.30e-14,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,1.72425731986345,0,0,0.569212969109448,0,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,1.86705782949428,6.58982252315217,8.17976044109414,12.8488331133846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3458368795583,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CD79A | |||
}} |
Revision as of 20:51, 11 September 2013
Short description: | p3@CD79A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CD79A_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -194bp_to_X13451_5end |
EntrezGene: | CD79A |
HGNC: | 1698 |
UniProt: | P11912 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.75e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 7.30e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.64e-62 | 10 |
germ cell and embryonal cancer | 1.86e-28 | 22 |
germ cell cancer | 1.86e-28 | 22 |
peripheral nerve sheath neoplasm | 7.30e-14 | 2 |
neurofibroma | 7.30e-14 | 2 |
peripheral nervous system neoplasm | 1.10e-09 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.