FFCP PHASE1:Hg19::chr19:13135989..13136023,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4784|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7788|TSSclassifier=S|UniProt=Q14938,Q13051|association_with_transcript=128bp_to_,-128bp_to_U07811,U18760_5end|description=CAGE_peak_18_at_NFIX_5end|id=chr19:13135989..13136023,+|ontology_enrichment_celltype=CL:0000055!2.48e-07!180|ontology_enrichment_celltype_v019=CL:0002603;4.94e-11;3!CL:0000128;4.24e-08;7!CL:0000126;4.24e-08;7!CL:0000127;4.24e-08;7|ontology_enrichment_celltype_v019_2=CL:0002603,1.28e-10,3;CL:0000128,9.14e-08,7;CL:0000126,9.14e-08,7;CL:0000127,9.14e-08,7;CL:0002453,9.14e-08,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.79e-20!365;UBERON:0001049!9.18e-20!57;UBERON:0005068!9.18e-20!57;UBERON:0006241!9.18e-20!57;UBERON:0007135!9.18e-20!57;UBERON:0001017!8.22e-18!82;UBERON:0005743!2.23e-17!86;UBERON:0002616!5.55e-17!59;UBERON:0007023!6.27e-17!115;UBERON:0000955!1.52e-16!69;UBERON:0006238!1.52e-16!69;UBERON:0002346!6.64e-16!90;UBERON:0001893!8.14e-16!34;UBERON:0002780!1.73e-15!41;UBERON:0001890!1.73e-15!41;UBERON:0006240!1.73e-15!41;UBERON:0002020!2.07e-15!34;UBERON:0003528!2.07e-15!34;UBERON:0002791!3.62e-15!33;UBERON:0000033!7.47e-15!123;UBERON:0003075!7.62e-15!86;UBERON:0007284!7.62e-15!86;UBERON:0003080!8.41e-15!42;UBERON:0001869!1.06e-14!32;UBERON:0000073!1.11e-14!94;UBERON:0001016!1.11e-14!94;UBERON:0000153!1.92e-14!129;UBERON:0007811!1.92e-14!129;UBERON:0000956!5.09e-14!25;UBERON:0000203!5.09e-14!25;UBERON:0000924!9.82e-14!173;UBERON:0006601!9.82e-14!173;UBERON:0004111!1.02e-13!241;UBERON:0004121!8.10e-13!169;UBERON:0000477!1.06e-12!286;UBERON:0002619!4.20e-12!22;UBERON:0000025!1.35e-11!194;UBERON:0000483!1.89e-11!309;UBERON:0000119!5.74e-11!312;UBERON:0001950!6.75e-11!20;UBERON:0000481!1.16e-10!347;UBERON:0003056!1.65e-09!61;UBERON:0000468!7.06e-09!659|ontology_enrichment_uberon_v019=UBERON:0001950;9.97e-15;20!UBERON:0000956;5.59e-14;25!UBERON:0000203;5.59e-14;25!UBERON:0002619;2.87e-13;22!UBERON:0001893;1.47e-12;34!UBERON:0003528;3.23e-11;34!UBERON:0002020;3.23e-11;34!UBERON:0001869;8.96e-11;32!UBERON:0002791;2.36e-10;32!UBERON:0000073;9.70e-10;53!UBERON:0002616;9.70e-10;53!UBERON:0002037;1.91e-09;6!UBERON:0002780;4.17e-09;41!UBERON:0001890;4.17e-09;41!UBERON:0004089;2.34e-08;2!UBERON:0002771;6.54e-08;2!UBERON:0005090;6.54e-08;2!UBERON:0001630;6.54e-08;2!UBERON:0000955;2.60e-07;68!UBERON:0002021;4.72e-07;5!UBERON:0001017;8.83e-07;75!UBERON:0001872;8.88e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.97e-17,56;UBERON:0005068,7.97e-17,56;UBERON:0006241,7.97e-17,56;UBERON:0007135,7.97e-17,56;UBERON:0000073,5.17e-16,53;UBERON:0002616,5.17e-16,53;UBERON:0001950,1.50e-14,20;UBERON:0000955,1.58e-14,68;UBERON:0006238,1.58e-14,68;UBERON:0001017,2.31e-14,81;UBERON:0000956,9.54e-14,25;UBERON:0000203,9.54e-14,25;UBERON:0001893,1.04e-13,34;UBERON:0002619,4.15e-13,22;UBERON:0002780,9.57e-13,41;UBERON:0001890,9.57e-13,41;UBERON:0003080,9.57e-13,41;UBERON:0006240,9.57e-13,41;UBERON:0003075,1.01e-12,82;UBERON:0007284,1.01e-12,82;UBERON:0002791,1.74e-12,32;UBERON:0001869,1.74e-12,32;UBERON:0001016,1.96e-12,89;UBERON:0002346,6.61e-12,86;UBERON:0003528,1.27e-11,34;UBERON:0002020,1.27e-11,34;UBERON:0007023,1.41e-11,114;UBERON:0010371,2.57e-11,104;UBERON:0000025,2.04e-09,192;UBERON:0002037,3.05e-09,6;UBERON:0006215,3.05e-09,6;UBERON:0004111,5.44e-09,240;UBERON:0010314,9.23e-09,132;UBERON:0002771,1.20e-08,2;UBERON:0004121,1.79e-08,171;UBERON:0000924,1.79e-08,171;UBERON:0006601,1.79e-08,171;UBERON:0005090,3.54e-08,2;UBERON:0001630,3.54e-08,2;UBERON:0004089,5.40e-08,2;UBERON:0000483,8.94e-08,306;UBERON:0003056,1.21e-07,61;UBERON:0000119,1.29e-07,309;UBERON:0002021,8.66e-07,5|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0.261185628199839,0.245733936501509,1.39560233594486,0,0,0.495065411840187,0.331397375727916,0,0,0,0,1.10808952269109,1.22400414746552,1.25381888591235,0.85870796139317,0.684372125364421,1.12988375635323,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.255725123687061,0,1.50401373190767,0.434539556882471,0.795285947051099,0.973269740605272,0,0.221729397462564,0.175669571386252,0.589405839739707,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,1.98788780678127,0.379891534993739,0,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.587172493218824,0,0.140450806702248,0,0.491337269247072,0.413303124703062,0,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0.831192346452549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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4784 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7788 | |||
|TSSclassifier=S | |||
|UniProt=Q14938,Q13051 | |||
|association_with_transcript=128bp_to_,-128bp_to_U07811,U18760_5end | |||
|description=CAGE_peak_18_at_NFIX_5end | |||
|id=chr19:13135989..13136023,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.48e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002603;4.94e-11;3!CL:0000128;4.24e-08;7!CL:0000126;4.24e-08;7!CL:0000127;4.24e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,1.28e-10,3;CL:0000128,9.14e-08,7;CL:0000126,9.14e-08,7;CL:0000127,9.14e-08,7;CL:0002453,9.14e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.79e-20!365;UBERON:0001049!9.18e-20!57;UBERON:0005068!9.18e-20!57;UBERON:0006241!9.18e-20!57;UBERON:0007135!9.18e-20!57;UBERON:0001017!8.22e-18!82;UBERON:0005743!2.23e-17!86;UBERON:0002616!5.55e-17!59;UBERON:0007023!6.27e-17!115;UBERON:0000955!1.52e-16!69;UBERON:0006238!1.52e-16!69;UBERON:0002346!6.64e-16!90;UBERON:0001893!8.14e-16!34;UBERON:0002780!1.73e-15!41;UBERON:0001890!1.73e-15!41;UBERON:0006240!1.73e-15!41;UBERON:0002020!2.07e-15!34;UBERON:0003528!2.07e-15!34;UBERON:0002791!3.62e-15!33;UBERON:0000033!7.47e-15!123;UBERON:0003075!7.62e-15!86;UBERON:0007284!7.62e-15!86;UBERON:0003080!8.41e-15!42;UBERON:0001869!1.06e-14!32;UBERON:0000073!1.11e-14!94;UBERON:0001016!1.11e-14!94;UBERON:0000153!1.92e-14!129;UBERON:0007811!1.92e-14!129;UBERON:0000956!5.09e-14!25;UBERON:0000203!5.09e-14!25;UBERON:0000924!9.82e-14!173;UBERON:0006601!9.82e-14!173;UBERON:0004111!1.02e-13!241;UBERON:0004121!8.10e-13!169;UBERON:0000477!1.06e-12!286;UBERON:0002619!4.20e-12!22;UBERON:0000025!1.35e-11!194;UBERON:0000483!1.89e-11!309;UBERON:0000119!5.74e-11!312;UBERON:0001950!6.75e-11!20;UBERON:0000481!1.16e-10!347;UBERON:0003056!1.65e-09!61;UBERON:0000468!7.06e-09!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.97e-15;20!UBERON:0000956;5.59e-14;25!UBERON:0000203;5.59e-14;25!UBERON:0002619;2.87e-13;22!UBERON:0001893;1.47e-12;34!UBERON:0003528;3.23e-11;34!UBERON:0002020;3.23e-11;34!UBERON:0001869;8.96e-11;32!UBERON:0002791;2.36e-10;32!UBERON:0000073;9.70e-10;53!UBERON:0002616;9.70e-10;53!UBERON:0002037;1.91e-09;6!UBERON:0002780;4.17e-09;41!UBERON:0001890;4.17e-09;41!UBERON:0004089;2.34e-08;2!UBERON:0002771;6.54e-08;2!UBERON:0005090;6.54e-08;2!UBERON:0001630;6.54e-08;2!UBERON:0000955;2.60e-07;68!UBERON:0002021;4.72e-07;5!UBERON:0001017;8.83e-07;75!UBERON:0001872;8.88e-07;5 | |||
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| |||
|short_description=p18@NFIX | |||
}} |
Revision as of 18:53, 11 September 2013
Short description: | p18@NFIX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_NFIX_5end |
Coexpression cluster: | NA |
Association with transcript: | 128bp_to_, -128bp_to_U07811, U18760_5end |
EntrezGene: | NFIX |
HGNC: | 7788 |
UniProt: | Q14938Q13051 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 1.28e-10 | 3 |
oligodendrocyte | 9.14e-08 | 7 |
macroglial cell | 9.14e-08 | 7 |
astrocyte | 9.14e-08 | 7 |
oligodendrocyte precursor cell | 9.14e-08 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.