FFCP PHASE1:Hg19::chr19:13135914..13135942,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4784|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7788|TSSclassifier=S|UniProt=Q14938|association_with_transcript=53bp_to_U07811_5end|description=CAGE_peak_19_at_NFIX_5end|id=chr19:13135914..13135942,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002595;3.66e-08;5|ontology_enrichment_celltype_v019_2=CL:0002595,2.76e-08,5|ontology_enrichment_development_v019=UBERON:0006215;7.00e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.50e-18!115;UBERON:0001049!1.16e-17!57;UBERON:0005068!1.16e-17!57;UBERON:0006241!1.16e-17!57;UBERON:0007135!1.16e-17!57;UBERON:0002616!1.01e-15!59;UBERON:0000956!1.74e-15!25;UBERON:0000203!1.74e-15!25;UBERON:0000955!2.56e-15!69;UBERON:0006238!2.56e-15!69;UBERON:0002780!4.94e-15!41;UBERON:0001890!4.94e-15!41;UBERON:0006240!4.94e-15!41;UBERON:0003080!2.29e-14!42;UBERON:0001893!2.54e-14!34;UBERON:0001017!3.16e-14!82;UBERON:0002619!3.35e-14!22;UBERON:0000153!6.06e-14!129;UBERON:0007811!6.06e-14!129;UBERON:0000033!6.65e-14!123;UBERON:0001869!1.19e-13!32;UBERON:0002791!1.27e-13!33;UBERON:0005743!3.57e-13!86;UBERON:0000475!3.66e-13!365;UBERON:0001950!6.72e-13!20;UBERON:0002020!7.94e-13!34;UBERON:0003528!7.94e-13!34;UBERON:0003075!1.03e-12!86;UBERON:0007284!1.03e-12!86;UBERON:0000073!5.40e-12!94;UBERON:0001016!5.40e-12!94;UBERON:0004121!1.43e-11!169;UBERON:0002346!2.43e-11!90;UBERON:0000924!1.04e-10!173;UBERON:0006601!1.04e-10!173;UBERON:0003056!2.06e-09!61;UBERON:0004111!3.56e-08!241|ontology_enrichment_uberon_v019=UBERON:0002021;4.84e-22;5!UBERON:0002619;9.81e-17;22!UBERON:0001950;4.73e-15;20!UBERON:0000956;1.41e-14;25!UBERON:0000203;1.41e-14;25!UBERON:0001869;1.89e-12;32!UBERON:0002791;5.66e-11;32!UBERON:0001893;1.52e-10;34!UBERON:0001829;1.44e-09;2!UBERON:0003528;1.29e-08;34!UBERON:0002020;1.29e-08;34!UBERON:0000073;2.74e-08;53!UBERON:0002616;2.74e-08;53!UBERON:0003834;3.66e-08;5!UBERON:0001533;3.66e-08;5!UBERON:0002780;4.30e-08;41!UBERON:0001890;4.30e-08;41!UBERON:0004732;5.00e-08;13!UBERON:0002680;7.36e-08;9!UBERON:0001895;7.36e-08;9!UBERON:0001016;1.74e-07;83!UBERON:0002037;3.80e-07;6!UBERON:0001044;4.68e-07;6!UBERON:0003293;4.68e-07;6!UBERON:0003294;4.68e-07;6!UBERON:0010047;4.68e-07;6!UBERON:0003408;4.68e-07;6!UBERON:0000167;4.68e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.59e-22,5;UBERON:0002619,5.84e-17,22;UBERON:0001049,1.44e-15,56;UBERON:0005068,1.44e-15,56;UBERON:0006241,1.44e-15,56;UBERON:0007135,1.44e-15,56;UBERON:0001950,3.35e-15,20;UBERON:0000956,8.96e-15,25;UBERON:0000203,8.96e-15,25;UBERON:0000073,2.17e-14,53;UBERON:0002616,2.17e-14,53;UBERON:0001869,1.66e-13,32;UBERON:0007023,8.66e-13,114;UBERON:0001893,1.32e-12,34;UBERON:0003075,2.12e-12,82;UBERON:0007284,2.12e-12,82;UBERON:0001017,2.50e-12,81;UBERON:0001016,3.92e-12,89;UBERON:0000955,7.77e-12,68;UBERON:0006238,7.77e-12,68;UBERON:0002346,1.22e-11,86;UBERON:0010371,1.45e-11,104;UBERON:0002791,3.19e-11,32;UBERON:0003528,1.80e-10,34;UBERON:0002020,1.80e-10,34;UBERON:0004121,2.17e-10,171;UBERON:0000924,2.17e-10,171;UBERON:0006601,2.17e-10,171;UBERON:0002780,3.91e-10,41;UBERON:0001890,3.91e-10,41;UBERON:0003080,3.91e-10,41;UBERON:0006240,3.91e-10,41;UBERON:0001829,7.56e-10,2;UBERON:0010314,3.91e-09,132;UBERON:0003834,2.76e-08,5;UBERON:0001533,2.76e-08,5;UBERON:0004732,5.46e-08,13;UBERON:0002680,8.85e-08,9;UBERON:0001895,8.85e-08,9;UBERON:0010092,8.85e-08,9;UBERON:0003056,2.00e-07,61;UBERON:0011216,2.20e-07,223;UBERON:0001044,3.39e-07,6;UBERON:0003293,3.39e-07,6;UBERON:0003294,3.39e-07,6;UBERON:0010047,3.39e-07,6;UBERON:0000167,3.39e-07,6;UBERON:0002037,3.77e-07,6;UBERON:0006215,3.77e-07,6;UBERON:0003076,5.11e-07,15;UBERON:0003057,5.11e-07,15|phase1_expression=0.181678379270557,0.856402095563933,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.263504357079378,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0.204154171254893,0,0,0,1.23633464639278,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0.427114777637135,0,0,0.618315175430633,0,0,0.168776332241266,0.389748020644795,0,0.460249493211497,0.323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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4784 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7788 | |||
|TSSclassifier=S | |||
|UniProt=Q14938 | |||
|association_with_transcript=53bp_to_U07811_5end | |||
|description=CAGE_peak_19_at_NFIX_5end | |||
|id=chr19:13135914..13135942,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002595;3.66e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,2.76e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.00e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-18!115;UBERON:0001049!1.16e-17!57;UBERON:0005068!1.16e-17!57;UBERON:0006241!1.16e-17!57;UBERON:0007135!1.16e-17!57;UBERON:0002616!1.01e-15!59;UBERON:0000956!1.74e-15!25;UBERON:0000203!1.74e-15!25;UBERON:0000955!2.56e-15!69;UBERON:0006238!2.56e-15!69;UBERON:0002780!4.94e-15!41;UBERON:0001890!4.94e-15!41;UBERON:0006240!4.94e-15!41;UBERON:0003080!2.29e-14!42;UBERON:0001893!2.54e-14!34;UBERON:0001017!3.16e-14!82;UBERON:0002619!3.35e-14!22;UBERON:0000153!6.06e-14!129;UBERON:0007811!6.06e-14!129;UBERON:0000033!6.65e-14!123;UBERON:0001869!1.19e-13!32;UBERON:0002791!1.27e-13!33;UBERON:0005743!3.57e-13!86;UBERON:0000475!3.66e-13!365;UBERON:0001950!6.72e-13!20;UBERON:0002020!7.94e-13!34;UBERON:0003528!7.94e-13!34;UBERON:0003075!1.03e-12!86;UBERON:0007284!1.03e-12!86;UBERON:0000073!5.40e-12!94;UBERON:0001016!5.40e-12!94;UBERON:0004121!1.43e-11!169;UBERON:0002346!2.43e-11!90;UBERON:0000924!1.04e-10!173;UBERON:0006601!1.04e-10!173;UBERON:0003056!2.06e-09!61;UBERON:0004111!3.56e-08!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;4.84e-22;5!UBERON:0002619;9.81e-17;22!UBERON:0001950;4.73e-15;20!UBERON:0000956;1.41e-14;25!UBERON:0000203;1.41e-14;25!UBERON:0001869;1.89e-12;32!UBERON:0002791;5.66e-11;32!UBERON:0001893;1.52e-10;34!UBERON:0001829;1.44e-09;2!UBERON:0003528;1.29e-08;34!UBERON:0002020;1.29e-08;34!UBERON:0000073;2.74e-08;53!UBERON:0002616;2.74e-08;53!UBERON:0003834;3.66e-08;5!UBERON:0001533;3.66e-08;5!UBERON:0002780;4.30e-08;41!UBERON:0001890;4.30e-08;41!UBERON:0004732;5.00e-08;13!UBERON:0002680;7.36e-08;9!UBERON:0001895;7.36e-08;9!UBERON:0001016;1.74e-07;83!UBERON:0002037;3.80e-07;6!UBERON:0001044;4.68e-07;6!UBERON:0003293;4.68e-07;6!UBERON:0003294;4.68e-07;6!UBERON:0010047;4.68e-07;6!UBERON:0003408;4.68e-07;6!UBERON:0000167;4.68e-07;6 | |||
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| |||
|short_description=p19@NFIX | |||
}} |
Revision as of 18:53, 11 September 2013
Short description: | p19@NFIX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_NFIX_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_U07811_5end |
EntrezGene: | NFIX |
HGNC: | 7788 |
UniProt: | Q14938 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 2.76e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.