FFCP PHASE1:Hg19::chr19:11308398..11308420,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25959|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29300|TSSclassifier=S|UniProt=Q9NXX5|association_with_transcript=46bp_to_uc002mqq.2_5end|description=CAGE_peak_3_at_KANK2_5end|id=chr19:11308398..11308420,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000669;4.60e-15;4!CL:0002537;2.17e-11;5!CL:0002575;9.49e-09;2!CL:0000650;5.10e-08;2!CL:1000500;5.10e-08;2!CL:1000618;5.10e-08;2!CL:1001318;5.10e-08;2!CL:0002173;5.10e-08;2!CL:0002549;6.85e-08;2!CL:0002602;6.85e-08;2|ontology_enrichment_celltype_v019_2=CL:0000669,3.16e-15,4;CL:0002537,1.40e-11,5;CL:0002575,9.55e-09,2;CL:0000650,3.49e-08,2;CL:1000500,3.49e-08,2;CL:1000618,3.49e-08,2;CL:1001318,3.49e-08,2;CL:0002173,3.49e-08,2;CL:0002602,9.88e-08,2;CL:0002549,1.02e-07,2|ontology_enrichment_development_v019=UBERON:0007297;1.58e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!9.26e-09!347;UBERON:0000475!2.10e-08!365;UBERON:0002100!1.16e-07!216;UBERON:0000062!2.22e-07!511;UBERON:0003104!2.48e-07!238;UBERON:0009142!2.48e-07!238;UBERON:0005256!3.72e-07!143;UBERON:0003101!3.77e-07!22;UBERON:0000079!3.77e-07!22;UBERON:0000468!4.56e-07!659|ontology_enrichment_uberon_v019=UBERON:0005904;2.20e-13;4!UBERON:0006947;1.83e-10;3!UBERON:0004054;1.83e-10;3!UBERON:0003135;2.23e-10;11!UBERON:0005631;2.10e-08;10!UBERON:0000158;2.10e-08;10!UBERON:0000305;3.86e-08;7!UBERON:0003567;5.10e-08;2!UBERON:0003838;5.10e-08;2!UBERON:0003586;5.10e-08;2!UBERON:0005169;5.10e-08;2!UBERON:0002321;5.10e-08;2!UBERON:0005215;5.10e-08;2!UBERON:0002303;5.10e-08;2!UBERON:0002319;5.10e-08;2!UBERON:0005629;6.85e-08;2!UBERON:0005358;6.85e-08;2!UBERON:0006444;6.85e-08;2!UBERON:0001995;6.85e-08;2!UBERON:0001886;6.85e-08;2!UBERON:0004715;6.85e-08;2!UBERON:0004086;6.85e-08;2!UBERON:0005282;6.85e-08;2!UBERON:0005281;6.85e-08;2!UBERON:0005284;7.31e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.65e-13,4;UBERON:0004871,8.06e-11,8;UBERON:0004876,1.17e-10,11;UBERON:0006947,1.87e-10,3;UBERON:0004054,1.87e-10,3;UBERON:0003135,2.56e-10,11;UBERON:0000305,2.84e-08,7;UBERON:0003567,3.49e-08,2;UBERON:0003838,3.49e-08,2;UBERON:0003586,3.49e-08,2;UBERON:0005169,3.49e-08,2;UBERON:0002321,3.49e-08,2;UBERON:0005215,3.49e-08,2;UBERON:0002303,3.49e-08,2;UBERON:0002319,3.49e-08,2;UBERON:0003104,7.25e-08,160;UBERON:0009142,7.25e-08,160;UBERON:0006444,9.88e-08,2;UBERON:0001995,9.88e-08,2;UBERON:0004715,9.88e-08,2;UBERON:0005629,1.02e-07,2;UBERON:0005358,1.02e-07,2;UBERON:0001886,1.02e-07,2;UBERON:0004086,1.02e-07,2;UBERON:0005282,1.02e-07,2;UBERON:0005281,1.02e-07,2;UBERON:0005256,3.73e-07,122;UBERON:0005284,9.81e-07,5|phase1_expression=0.363356758541113,0.856402095563933,0.281908808191942,0,0,0,0,0.631719873426831,0.783556884599516,0,0.697801167972428,0,0.527533956456907,1.11389717664042,2.31978163009541,0.672325146451775,0,0,0,0.984968464614303,1.42800483870977,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.383587685530591,0,0,0.289693037921647,0.795285947051099,0,0,0.221729397462564,0.43917392846563,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0.506522046658319,0,0.286836620748814,0,0,0,0.24666754841716,0.933633106199299,0.538842688278752,0.326923806226917,2.27036141467397,1.15235184896,0,0.624320153660641,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.516628905878827,0,0,0,0,0.505008341862199,0.125118519871964,0,0.438977620880838,0,0.45071417671979,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.772921620136887,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.644349290496095,0.323292113637624,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0,0,0,2.4694440679884,2.94017422771084,1.26755034821831,1.96565443335525,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.469634776943287,0.866198686566443,0,0.761016608938393,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0.285826432630578,3.58819469905154,0,0.8800594298514,0.258543431515556,0,0,1.32969058292435,3.12022310734098,0,0,0.266422179016099,0.285955987316295,0,0,0,0.710783897485092,0.791951872933429,0.301439377059586,0,0,0,0,0,0.958499421966331,0,0,0.723906533337896,3.08214483825575,0.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124149428591716,0,0.190941474834495,0.202117188958219,0,0.684466602170562,0.0673520530145875,0.286888821570705,0,0.162806537221949,0.106727345877715,0,0,0,4.03396765803459,4.06896178315738,0,0.201273793591026,0|short_description=p3@KANK2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=25959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29300 | |||
|TSSclassifier=S | |||
|UniProt=Q9NXX5 | |||
|association_with_transcript=46bp_to_uc002mqq.2_5end | |||
|description=CAGE_peak_3_at_KANK2_5end | |||
|id=chr19:11308398..11308420,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000669;4.60e-15;4!CL:0002537;2.17e-11;5!CL:0002575;9.49e-09;2!CL:0000650;5.10e-08;2!CL:1000500;5.10e-08;2!CL:1000618;5.10e-08;2!CL:1001318;5.10e-08;2!CL:0002173;5.10e-08;2!CL:0002549;6.85e-08;2!CL:0002602;6.85e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,3.16e-15,4;CL:0002537,1.40e-11,5;CL:0002575,9.55e-09,2;CL:0000650,3.49e-08,2;CL:1000500,3.49e-08,2;CL:1000618,3.49e-08,2;CL:1001318,3.49e-08,2;CL:0002173,3.49e-08,2;CL:0002602,9.88e-08,2;CL:0002549,1.02e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.58e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!9.26e-09!347;UBERON:0000475!2.10e-08!365;UBERON:0002100!1.16e-07!216;UBERON:0000062!2.22e-07!511;UBERON:0003104!2.48e-07!238;UBERON:0009142!2.48e-07!238;UBERON:0005256!3.72e-07!143;UBERON:0003101!3.77e-07!22;UBERON:0000079!3.77e-07!22;UBERON:0000468!4.56e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;2.20e-13;4!UBERON:0006947;1.83e-10;3!UBERON:0004054;1.83e-10;3!UBERON:0003135;2.23e-10;11!UBERON:0005631;2.10e-08;10!UBERON:0000158;2.10e-08;10!UBERON:0000305;3.86e-08;7!UBERON:0003567;5.10e-08;2!UBERON:0003838;5.10e-08;2!UBERON:0003586;5.10e-08;2!UBERON:0005169;5.10e-08;2!UBERON:0002321;5.10e-08;2!UBERON:0005215;5.10e-08;2!UBERON:0002303;5.10e-08;2!UBERON:0002319;5.10e-08;2!UBERON:0005629;6.85e-08;2!UBERON:0005358;6.85e-08;2!UBERON:0006444;6.85e-08;2!UBERON:0001995;6.85e-08;2!UBERON:0001886;6.85e-08;2!UBERON:0004715;6.85e-08;2!UBERON:0004086;6.85e-08;2!UBERON:0005282;6.85e-08;2!UBERON:0005281;6.85e-08;2!UBERON:0005284;7.31e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.65e-13,4;UBERON:0004871,8.06e-11,8;UBERON:0004876,1.17e-10,11;UBERON:0006947,1.87e-10,3;UBERON:0004054,1.87e-10,3;UBERON:0003135,2.56e-10,11;UBERON:0000305,2.84e-08,7;UBERON:0003567,3.49e-08,2;UBERON:0003838,3.49e-08,2;UBERON:0003586,3.49e-08,2;UBERON:0005169,3.49e-08,2;UBERON:0002321,3.49e-08,2;UBERON:0005215,3.49e-08,2;UBERON:0002303,3.49e-08,2;UBERON:0002319,3.49e-08,2;UBERON:0003104,7.25e-08,160;UBERON:0009142,7.25e-08,160;UBERON:0006444,9.88e-08,2;UBERON:0001995,9.88e-08,2;UBERON:0004715,9.88e-08,2;UBERON:0005629,1.02e-07,2;UBERON:0005358,1.02e-07,2;UBERON:0001886,1.02e-07,2;UBERON:0004086,1.02e-07,2;UBERON:0005282,1.02e-07,2;UBERON:0005281,1.02e-07,2;UBERON:0005256,3.73e-07,122;UBERON:0005284,9.81e-07,5 | |||
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| |||
|short_description=p3@KANK2 | |||
}} |
Revision as of 18:39, 11 September 2013
Short description: | p3@KANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KANK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_uc002mqq.2_5end |
EntrezGene: | KANK2 |
HGNC: | 29300 |
UniProt: | Q9NXX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 3.16e-15 | 4 |
amnion mesenchymal stem cell | 1.40e-11 | 5 |
central nervous system pericyte | 9.55e-09 | 2 |
mesangial cell | 3.49e-08 | 2 |
kidney interstitial cell | 3.49e-08 | 2 |
juxtaglomerular complex cell | 3.49e-08 | 2 |
renal interstitial pericyte | 3.49e-08 | 2 |
extraglomerular mesangial cell | 3.49e-08 | 2 |
annulus pulposus cell | 9.88e-08 | 2 |
fibroblast of choroid plexus | 1.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 1.65e-13 | 4 |
somatic layer of lateral plate mesoderm | 8.06e-11 | 8 |
urogenital ridge | 1.17e-10 | 11 |
male genital duct | 1.87e-10 | 3 |
internal male genitalia | 1.87e-10 | 3 |
male reproductive organ | 2.56e-10 | 11 |
amnion | 2.84e-08 | 7 |
abdomen connective tissue | 3.49e-08 | 2 |
abdominal segment connective tissue | 3.49e-08 | 2 |
trunk connective tissue | 3.49e-08 | 2 |
interstitial tissue | 3.49e-08 | 2 |
extraglomerular mesangium | 3.49e-08 | 2 |
kidney interstitium | 3.49e-08 | 2 |
juxtaglomerular apparatus | 3.49e-08 | 2 |
mesangium | 3.49e-08 | 2 |
mesenchyme | 7.25e-08 | 160 |
entire embryonic mesenchyme | 7.25e-08 | 160 |
annulus fibrosus | 9.88e-08 | 2 |
fibrocartilage | 9.88e-08 | 2 |
annulus fibrosus disci intervertebralis | 9.88e-08 | 2 |
vascular plexus | 1.02e-07 | 2 |
ventricle of nervous system | 1.02e-07 | 2 |
choroid plexus | 1.02e-07 | 2 |
brain ventricle | 1.02e-07 | 2 |
ventricular system of brain | 1.02e-07 | 2 |
ventricular system of central nervous system | 1.02e-07 | 2 |
trunk mesenchyme | 3.73e-07 | 122 |
brain vasculature | 9.81e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.