FFCP PHASE1:Hg19::chr19:6481776..6481815,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79958|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26225|TSSclassifier=S|UniProt=Q8IV53|association_with_transcript=0bp_to_ENST00000381480,ENST00000543576,NM_024898,uc002mfe.2,uc010xje.1_5end|coexpression_cluster_id=C57|description=CAGE_peak_1_at_DENND1C_5end|id=chr19:6481776..6481815,-|ontology_enrichment_celltype=CL:0000037!5.76e-76!172;CL:0000566!5.76e-76!172;CL:0000988!1.15e-74!182;CL:0000738!1.44e-71!140;CL:0002032!3.86e-71!165;CL:0000837!3.86e-71!165;CL:0002031!6.74e-60!124;CL:0002087!7.97e-60!119;CL:0000763!4.00e-36!112;CL:0000049!4.00e-36!112;CL:0000542!5.65e-32!53;CL:0000051!5.65e-32!53;CL:0000838!1.18e-31!52;CL:0000766!1.79e-31!76;CL:0000557!3.88e-27!71;CL:0000839!3.70e-26!70;CL:0002009!7.03e-25!65;CL:0002194!3.18e-24!63;CL:0000576!3.18e-24!63;CL:0000040!3.18e-24!63;CL:0000559!3.18e-24!63;CL:0002057!1.15e-21!42;CL:0000860!6.63e-19!45;CL:0000084!1.27e-16!25;CL:0000827!1.27e-16!25;CL:0000945!8.36e-14!24;CL:0000826!8.36e-14!24;CL:0000791!1.28e-13!18;CL:0000789!1.28e-13!18;CL:0002420!1.28e-13!18;CL:0002419!1.28e-13!18;CL:0000790!1.28e-13!18;CL:0000134!5.86e-10!358;CL:0000236!3.92e-09!14;CL:0002320!4.17e-09!365;CL:0000625!6.37e-09!11;CL:0002393!4.58e-07!9;CL:0002397!4.58e-07!9;CL:0000094!6.70e-07!8|ontology_enrichment_celltype_v019=CL:0000542;1.93e-20;53!CL:0002087;4.09e-19;104!CL:0000084;2.05e-18;25!CL:0000576;3.53e-17;48!CL:0000738;4.12e-17;136!CL:0000860;2.44e-16;33!CL:0002057;2.44e-16;33!CL:0000473;3.89e-16;39!CL:0000234;3.89e-16;39!CL:0000766;4.01e-16;69!CL:0000945;2.51e-15;24!CL:0000791;4.61e-15;18!CL:0000789;4.61e-15;18!CL:0002419;4.61e-15;18!CL:0000988;1.02e-13;177!CL:0000763;4.86e-12;100!CL:0000625;8.27e-10;11!CL:0000236;1.37e-09;13!CL:0000094;1.56e-07;8|ontology_enrichment_celltype_v019_2=CL:0000037,1.27e-85,168;CL:0000988,1.80e-84,177;CL:0000738,6.66e-84,136;CL:0002032,3.30e-80,161;CL:0000837,3.30e-80,161;CL:0002087,1.00e-70,115;CL:0002031,1.01e-69,120;CL:0000763,8.69e-41,108;CL:0000049,8.69e-41,108;CL:0000766,1.85e-38,72;CL:0000542,1.19e-35,53;CL:0000051,1.19e-35,53;CL:0000838,2.73e-35,52;CL:0000557,2.13e-33,67;CL:0000839,2.02e-31,66;CL:0002009,7.05e-31,61;CL:0002194,3.70e-30,59;CL:0000576,3.70e-30,59;CL:0000040,3.70e-30,59;CL:0000559,3.70e-30,59;CL:0000473,7.93e-27,48;CL:0000234,7.93e-27,48;CL:0000860,4.35e-24,42;CL:0002057,4.35e-24,42;CL:0000084,1.95e-18,25;CL:0000827,1.95e-18,25;CL:0000945,2.82e-15,24;CL:0000826,2.82e-15,24;CL:0000791,4.55e-15,18;CL:0000789,4.55e-15,18;CL:0002420,4.55e-15,18;CL:0002419,4.55e-15,18;CL:0000790,4.55e-15,18;CL:0000134,1.84e-13,354;CL:0002320,2.57e-12,361;CL:0000236,4.81e-10,14;CL:0000625,8.28e-10,11;CL:0000219,1.62e-08,386;CL:0002393,9.90e-08,9;CL:0002397,9.90e-08,9;CL:0000094,1.51e-07,8|ontology_enrichment_development_v019=CL:0000051;1.93e-20;53!CL:0002057;1.77e-17;42!CL:0000790;4.61e-15;18!CL:0000049;3.96e-11;108|ontology_enrichment_disease=DOID:2531!3.57e-11!51;DOID:0060083!3.57e-11!51;DOID:1240!1.67e-08!39|ontology_enrichment_disease_v019=DOID:2531;7.05e-07;51!DOID:0060083;7.05e-07;51|ontology_enrichment_disease_v019_2=DOID:2531,2.10e-11,51;DOID:0060083,2.10e-11,51;DOID:1240,2.56e-08,39|ontology_enrichment_uberon=UBERON:0002390!1.50e-36!102;UBERON:0003061!1.50e-36!102;UBERON:0002193!4.49e-32!112;UBERON:0002371!7.80e-23!80;UBERON:0001474!2.87e-19!86;UBERON:0007023!4.53e-19!115;UBERON:0002405!4.21e-18!115;UBERON:0004765!7.79e-14!101;UBERON:0001434!7.79e-14!101;UBERON:0000178!1.55e-11!15;UBERON:0000179!1.55e-11!15;UBERON:0000463!1.55e-11!15;UBERON:0003081!2.58e-08!216;UBERON:0002384!5.96e-08!375|ontology_enrichment_uberon_v019=UBERON:0000178;9.25e-13;15!UBERON:0000179;9.25e-13;15!UBERON:0000463;9.25e-13;15!UBERON:0002390;1.40e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-44,98;UBERON:0003061,1.66e-44,98;UBERON:0002193,1.07e-39,108;UBERON:0002405,9.78e-29,93;UBERON:0002371,1.41e-28,76;UBERON:0001474,1.41e-24,82;UBERON:0004765,3.63e-20,90;UBERON:0001434,2.54e-16,100;UBERON:0007023,7.41e-14,114;UBERON:0000178,9.80e-13,15;UBERON:0000179,9.80e-13,15;UBERON:0000463,9.80e-13,15;UBERON:0002384,3.96e-11,371;UBERON:0003081,2.59e-10,203|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6020213532687,32.1834310643787,32.2714203386085,55.8577273125444,42.6050631887906,51.8634013108855,0,0.30120591877825,0,25.176840188598,18.9085079208271,12.0376180127287,48.1976005422733,66.3802121126169,54.0357068082471,28.6611807027103,36.9238779261637,27.3030101692238,26.0262847415421,24.5619363397726,28.8675032813501,33.2373522775129,27.5482484974623,26.3250415260838,24.4538533473828,21.7736600549736,19.391542850864,42.4037187306041,32.9197188627751,20.3139729891513,30.3070166663594,21.0137735544541,14.3823030044854,29.9962214523485,28.2417543826962,28.1308335351578,27.3776579154974,25.3318845179472,21.7374622771674,25.5384129993154,20.9932533135722,13.7020894779026,27.8886018434985,28.1600775946909,28.2345498116652,26.6375781158682,27.25254506307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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26225 | |||
|TSSclassifier=S | |||
|UniProt=Q8IV53 | |||
|association_with_transcript=0bp_to_ENST00000381480,ENST00000543576,NM_024898,uc002mfe.2,uc010xje.1_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_DENND1C_5end | |||
|id=chr19:6481776..6481815,- | |||
|ontology_enrichment_celltype=CL:0000037!5.76e-76!172;CL:0000566!5.76e-76!172;CL:0000988!1.15e-74!182;CL:0000738!1.44e-71!140;CL:0002032!3.86e-71!165;CL:0000837!3.86e-71!165;CL:0002031!6.74e-60!124;CL:0002087!7.97e-60!119;CL:0000763!4.00e-36!112;CL:0000049!4.00e-36!112;CL:0000542!5.65e-32!53;CL:0000051!5.65e-32!53;CL:0000838!1.18e-31!52;CL:0000766!1.79e-31!76;CL:0000557!3.88e-27!71;CL:0000839!3.70e-26!70;CL:0002009!7.03e-25!65;CL:0002194!3.18e-24!63;CL:0000576!3.18e-24!63;CL:0000040!3.18e-24!63;CL:0000559!3.18e-24!63;CL:0002057!1.15e-21!42;CL:0000860!6.63e-19!45;CL:0000084!1.27e-16!25;CL:0000827!1.27e-16!25;CL:0000945!8.36e-14!24;CL:0000826!8.36e-14!24;CL:0000791!1.28e-13!18;CL:0000789!1.28e-13!18;CL:0002420!1.28e-13!18;CL:0002419!1.28e-13!18;CL:0000790!1.28e-13!18;CL:0000134!5.86e-10!358;CL:0000236!3.92e-09!14;CL:0002320!4.17e-09!365;CL:0000625!6.37e-09!11;CL:0002393!4.58e-07!9;CL:0002397!4.58e-07!9;CL:0000094!6.70e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.93e-20;53!CL:0002087;4.09e-19;104!CL:0000084;2.05e-18;25!CL:0000576;3.53e-17;48!CL:0000738;4.12e-17;136!CL:0000860;2.44e-16;33!CL:0002057;2.44e-16;33!CL:0000473;3.89e-16;39!CL:0000234;3.89e-16;39!CL:0000766;4.01e-16;69!CL:0000945;2.51e-15;24!CL:0000791;4.61e-15;18!CL:0000789;4.61e-15;18!CL:0002419;4.61e-15;18!CL:0000988;1.02e-13;177!CL:0000763;4.86e-12;100!CL:0000625;8.27e-10;11!CL:0000236;1.37e-09;13!CL:0000094;1.56e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.27e-85,168;CL:0000988,1.80e-84,177;CL:0000738,6.66e-84,136;CL:0002032,3.30e-80,161;CL:0000837,3.30e-80,161;CL:0002087,1.00e-70,115;CL:0002031,1.01e-69,120;CL:0000763,8.69e-41,108;CL:0000049,8.69e-41,108;CL:0000766,1.85e-38,72;CL:0000542,1.19e-35,53;CL:0000051,1.19e-35,53;CL:0000838,2.73e-35,52;CL:0000557,2.13e-33,67;CL:0000839,2.02e-31,66;CL:0002009,7.05e-31,61;CL:0002194,3.70e-30,59;CL:0000576,3.70e-30,59;CL:0000040,3.70e-30,59;CL:0000559,3.70e-30,59;CL:0000473,7.93e-27,48;CL:0000234,7.93e-27,48;CL:0000860,4.35e-24,42;CL:0002057,4.35e-24,42;CL:0000084,1.95e-18,25;CL:0000827,1.95e-18,25;CL:0000945,2.82e-15,24;CL:0000826,2.82e-15,24;CL:0000791,4.55e-15,18;CL:0000789,4.55e-15,18;CL:0002420,4.55e-15,18;CL:0002419,4.55e-15,18;CL:0000790,4.55e-15,18;CL:0000134,1.84e-13,354;CL:0002320,2.57e-12,361;CL:0000236,4.81e-10,14;CL:0000625,8.28e-10,11;CL:0000219,1.62e-08,386;CL:0002393,9.90e-08,9;CL:0002397,9.90e-08,9;CL:0000094,1.51e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;1.93e-20;53!CL:0002057;1.77e-17;42!CL:0000790;4.61e-15;18!CL:0000049;3.96e-11;108 | |||
|ontology_enrichment_disease=DOID:2531!3.57e-11!51;DOID:0060083!3.57e-11!51;DOID:1240!1.67e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;7.05e-07;51!DOID:0060083;7.05e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.10e-11,51;DOID:0060083,2.10e-11,51;DOID:1240,2.56e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.50e-36!102;UBERON:0003061!1.50e-36!102;UBERON:0002193!4.49e-32!112;UBERON:0002371!7.80e-23!80;UBERON:0001474!2.87e-19!86;UBERON:0007023!4.53e-19!115;UBERON:0002405!4.21e-18!115;UBERON:0004765!7.79e-14!101;UBERON:0001434!7.79e-14!101;UBERON:0000178!1.55e-11!15;UBERON:0000179!1.55e-11!15;UBERON:0000463!1.55e-11!15;UBERON:0003081!2.58e-08!216;UBERON:0002384!5.96e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.25e-13;15!UBERON:0000179;9.25e-13;15!UBERON:0000463;9.25e-13;15!UBERON:0002390;1.40e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-44,98;UBERON:0003061,1.66e-44,98;UBERON:0002193,1.07e-39,108;UBERON:0002405,9.78e-29,93;UBERON:0002371,1.41e-28,76;UBERON:0001474,1.41e-24,82;UBERON:0004765,3.63e-20,90;UBERON:0001434,2.54e-16,100;UBERON:0007023,7.41e-14,114;UBERON:0000178,9.80e-13,15;UBERON:0000179,9.80e-13,15;UBERON:0000463,9.80e-13,15;UBERON:0002384,3.96e-11,371;UBERON:0003081,2.59e-10,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6020213532687,32.1834310643787,32.2714203386085,55.8577273125444,42.6050631887906,51.8634013108855,0,0.30120591877825,0,25.176840188598,18.9085079208271,12.0376180127287,48.1976005422733,66.3802121126169,54.0357068082471,28.6611807027103,36.9238779261637,27.3030101692238,26.0262847415421,24.5619363397726,28.8675032813501,33.2373522775129,27.5482484974623,26.3250415260838,24.4538533473828,21.7736600549736,19.391542850864,42.4037187306041,32.9197188627751,20.3139729891513,30.3070166663594,21.0137735544541,14.3823030044854,29.9962214523485,28.2417543826962,28.1308335351578,27.3776579154974,25.3318845179472,21.7374622771674,25.5384129993154,20.9932533135722,13.7020894779026,27.8886018434985,28.1600775946909,28.2345498116652,26.6375781158682,27.2525450630798,20.5700551836575,45.8423971296914,44.8595072926242,32.916407344815,41.2246076307637,41.8993531027803,45.6460666219708,31.9214272990198,45.1540857241935,41.2820987508073,42.2390986707174,43.6910889009705,32.9118423929515,31.151306247355,40.0395987036012,37.9336610369959,47.5952308405101,32.4378276542024,55.2136580036165,68.7067511563998,73.0141865719187,15.8605594294831,21.2993253932984,8.95505888235262,57.4392528732393,87.6414000930637,78.1285696198135,65.7042926885365,45.9550395953362,51.1323630193512,81.8272259313228,72.7510283460183,40.9502211390024,49.1805245975639,78.5331204918545,78.7761616312902,73.743650066451,82.3833902064417,103.354906651907,83.7530917774302,85.2647738181847,64.7448803977106,86.7644847581307,58.8075488600368,44.0703567642209,45.7024502491898,72.8696713016168,51.2890317061796,46.2269252238057,30.414465422348,54.2070428679982,62.8414260768194,56.2188269485556,59.1943130110042,41.8775278429734,58.2643487919477,79.1622979519182,71.1087823064543,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.527008714158756,3.07800827419625,0,0,28.2356232479574,37.9602827312403,40.0203461161784,23.1335905576182,18.8758320557442,30.0880576076948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.4792295898348,34.9002237733493,0,0,0,0,0,2.12801029319014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,2.36315962672562,27.3707121637083,0.122988438543114,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,19.9435774930792,19.656358271696,20.9569938827107,0,0,0,0,0,0,4.43396914106349,15.0562822162617,19.9034990919141,24.5003920808834,26.8896383198189,0.253991577168676,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3247561282381,23.1038262058778,29.5167515276244,0,0,0,0,0,0,43.8252913014692,63.8379663054244,78.9196923985833,72.6421585343376,0,0,0,0,0,56.9245338199859,53.8490626567245,72.9371303647422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0,60.1694956017602,66.8714022537712,68.6258196676147,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51199612907412,4.6979355633693,4.70609861506113,7.30696123266303,4.01096189792928,0,0,0.215915916102139,0,1.08378575017541,2.00675909541941,0.509752546090077,0.831076008928724,2.91037181138832,1.53481913652154,0.784306353074702,0.512900250232778,0.656029291399411,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0.596586391912706,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.717881977197,0,0,0,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,3.20088922641049,0,0,0.443430153536676,0.229723400206959,55.3117894063065,59.6417021571053,80.8899005787311,64.0843475981452,63.7611523283601,61.6049645633081,63.1836781568594,74.5537665716614,0,0,0,16.3506794110632,8.22334513965736,22.7653898714925,14.8266433637805,15.5671909717597,16.2779564612512,12.4887413807091,19.1526944761988,25.5525432083247,17.802304964589,15.3546297857563,20.0507581672054,2.70866844482565,43.84054450331,26.6375613492183,16.1821570322324,43.6251787839821,14.747556686806,18.1177647392857,17.8528581631742,19.1480333493999,0.278406173895242,0,1.35227839237992,0.66614393599564,0,0,3.36968812325356,0,54.050041374577,0,0,0.890894042497916,0,0,3.51673541026282,0,11.5362711958732,0,2.59022384726391,32.6015020326754,0,0,32.0020494198781,0,0.539210106883961,0,60.3655396867709,3.84709281984041,59.8707730867349,0,1.93866549219044,0.649376687132959,0,0,0,4.34999745260876,0,0,0,0,0,0,0.885741385813839,1.92954301800653,0,0.221158519862449,1.18219047581419,1.75508317723178,0,0,1.23120413606075,0,0,0.0897576444097721,0,0.638002319463839,0.183195186803725,1.06606955203727,29.6360564767636,10.2037166656766,8.80921914070829,0,0,0,0,8.26470210697969,0,0.489698424477443,0,0,6.96683351754953,4.24596309616028,6.72133159426988,22.5356057797273,29.4082174692677,27.1497068714184,4.44847477672468,2.40773294189637,2.34264445725339,17.1507501862726,0,0,0,7.25944296291983,0.30607276163049,9.60436010353017,0.150323419414493,0,0,0,0,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| |||
|short_description=p1@DENND1C | |||
}} |
Revision as of 22:44, 11 September 2013
Short description: | p1@DENND1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DENND1C_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000381480, ENST00000543576, NM_024898, uc002mfe.2, uc010xje.1_5end |
EntrezGene: | DENND1C |
HGNC: | 26225 |
UniProt: | Q8IV53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.66e-44 | 98 |
blood island | 1.66e-44 | 98 |
hemolymphoid system | 1.07e-39 | 108 |
immune system | 9.78e-29 | 93 |
bone marrow | 1.41e-28 | 76 |
bone element | 1.41e-24 | 82 |
skeletal element | 3.63e-20 | 90 |
skeletal system | 2.54e-16 | 100 |
adult organism | 7.41e-14 | 114 |
blood | 9.80e-13 | 15 |
haemolymphatic fluid | 9.80e-13 | 15 |
organism substance | 9.80e-13 | 15 |
connective tissue | 3.96e-11 | 371 |
lateral plate mesoderm | 2.59e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.10e-11 | 51 |
immune system cancer | 2.10e-11 | 51 |
leukemia | 2.56e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.