FFCP PHASE1:Hg19::chr19:4233239..4233253,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2491|description=CAGE_peak_at_chr19:4233239..4233253,+|id=chr19:4233239..4233253,+|ontology_enrichment_celltype=CL:0002541!2.31e-18!3;CL:0002619!2.59e-18!3;CL:0000945!1.94e-13!24;CL:0000826!1.94e-13!24;CL:0000838!1.01e-10!52;CL:0000542!1.75e-10!53;CL:0000051!1.75e-10!53|ontology_enrichment_celltype_v019=CL:0002541;1.96e-12;3!CL:0002619;2.74e-12;3|ontology_enrichment_celltype_v019_2=CL:0002541,1.85e-12,3;CL:0002619,3.24e-12,3|ontology_enrichment_development_v019=UBERON:0003124;2.18e-34;1|ontology_enrichment_disease=DOID:0060058!1.71e-13!10;DOID:0060060!3.36e-07!1;DOID:0060061!3.36e-07!1;DOID:8691!3.36e-07!1;DOID:630!5.37e-07!1;DOID:0050177!5.37e-07!1;DOID:0050427!5.37e-07!1;DOID:1799!7.15e-07!1;DOID:10165!7.15e-07!1;DOID:1798!7.15e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000476!2.31e-18!3;UBERON:0000920!2.31e-18!3;UBERON:0003124!8.73e-14!7;UBERON:0000478!4.48e-11!24;UBERON:0005631!2.75e-10!14;UBERON:0000158!2.75e-10!14;UBERON:0002106!2.42e-08!3;UBERON:0004854!2.42e-08!3;UBERON:0009034!2.42e-08!3;UBERON:0002095!2.42e-08!3;UBERON:0004782!2.42e-08!3;UBERON:0003281!2.42e-08!3;UBERON:0009664!2.42e-08!3;UBERON:0002296!2.42e-08!3;UBERON:0005602!2.42e-08!3;UBERON:0001179!2.42e-08!3;UBERON:0006293!2.42e-08!3;UBERON:0004177!1.42e-07!7;UBERON:0000029!4.25e-07!1|ontology_enrichment_uberon_v019=UBERON:0000478;3.41e-13;24!UBERON:0003124;1.96e-12;3!UBERON:0000920;1.96e-12;3!UBERON:0001987;1.17e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0003124,5.35e-20,7;UBERON:0000478,3.34e-13,24;UBERON:0000920,1.85e-12,3;UBERON:0005631,1.57e-10,14;UBERON:0000158,1.57e-10,14;UBERON:0001987,1.22e-09,4;UBERON:0004340,1.22e-09,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,1.11957737119962,0.971680998056939,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0,0.957003479195758,2.65633020865401,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,1.35920332841153,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21755925406597,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p@chr19:4233239..4233253,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2491 | |||
|description=CAGE_peak_at_chr19:4233239..4233253,+ | |||
|id=chr19:4233239..4233253,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.31e-18!3;CL:0002619!2.59e-18!3;CL:0000945!1.94e-13!24;CL:0000826!1.94e-13!24;CL:0000838!1.01e-10!52;CL:0000542!1.75e-10!53;CL:0000051!1.75e-10!53 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.96e-12;3!CL:0002619;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.85e-12,3;CL:0002619,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.18e-34;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.71e-13!10;DOID:0060060!3.36e-07!1;DOID:0060061!3.36e-07!1;DOID:8691!3.36e-07!1;DOID:630!5.37e-07!1;DOID:0050177!5.37e-07!1;DOID:0050427!5.37e-07!1;DOID:1799!7.15e-07!1;DOID:10165!7.15e-07!1;DOID:1798!7.15e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.31e-18!3;UBERON:0000920!2.31e-18!3;UBERON:0003124!8.73e-14!7;UBERON:0000478!4.48e-11!24;UBERON:0005631!2.75e-10!14;UBERON:0000158!2.75e-10!14;UBERON:0002106!2.42e-08!3;UBERON:0004854!2.42e-08!3;UBERON:0009034!2.42e-08!3;UBERON:0002095!2.42e-08!3;UBERON:0004782!2.42e-08!3;UBERON:0003281!2.42e-08!3;UBERON:0009664!2.42e-08!3;UBERON:0002296!2.42e-08!3;UBERON:0005602!2.42e-08!3;UBERON:0001179!2.42e-08!3;UBERON:0006293!2.42e-08!3;UBERON:0004177!1.42e-07!7;UBERON:0000029!4.25e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.41e-13;24!UBERON:0003124;1.96e-12;3!UBERON:0000920;1.96e-12;3!UBERON:0001987;1.17e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,5.35e-20,7;UBERON:0000478,3.34e-13,24;UBERON:0000920,1.85e-12,3;UBERON:0005631,1.57e-10,14;UBERON:0000158,1.57e-10,14;UBERON:0001987,1.22e-09,4;UBERON:0004340,1.22e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,1.11957737119962,0.971680998056939,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0,0.957003479195758,2.65633020865401,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,1.35920332841153,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21755925406597,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr19:4233239..4233253,+ | |||
}} |
Revision as of 20:51, 11 September 2013
Short description: | p@chr19:4233239..4233253, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:4233239..4233253, + |
Coexpression cluster: | C2491_placenta_chorionic_mesothelioma_choriocarcinoma_amniotic_Alveolar_rectal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.85e-12 | 3 |
adult endothelial progenitor cell | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 5.35e-20 | 7 |
extraembryonic structure | 3.34e-13 | 24 |
egg chorion | 1.85e-12 | 3 |
extraembryonic membrane | 1.57e-10 | 14 |
membranous layer | 1.57e-10 | 14 |
placenta | 1.22e-09 | 4 |
allantois | 1.22e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.