FFCP PHASE1:Hg19::chr19:3558028..3558043,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=126321|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28299|TSSclassifier=W|UniProt=Q6NUT3,E9PAJ8,A8MXP7|association_with_transcript=-457bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end|coexpression_cluster_id=C88|description=CAGE_peak_6_at_MFSD12_5end|id=chr19:3558028..3558043,-|ontology_enrichment_celltype=CL:0000148!1.96e-28!10;CL:0000541!1.96e-28!10;CL:0000147!4.75e-20!14;CL:0002567!1.15e-18!3;CL:0002150!3.66e-18!3;CL:0000861!3.66e-18!3;CL:0000710!9.42e-14!20;CL:0000453!3.20e-10!5;CL:0000075!6.14e-10!27;CL:0000451!4.92e-08!10;CL:0002077!5.88e-08!33;CL:0002566!2.66e-07!1|ontology_enrichment_celltype_v019=CL:0000148;8.70e-58;10!CL:0000147;3.62e-41;14!CL:0002567;1.29e-36;3!CL:0000710;1.10e-28;20!CL:0000075;4.09e-21;27!CL:0002077;9.17e-15;34!CL:0002566;2.62e-13;1!CL:0002600;4.98e-07;2|ontology_enrichment_celltype_v019_2=CL:0000148,8.71e-58,10;CL:0000541,8.71e-58,10;CL:0000147,3.62e-41,14;CL:0002567,1.29e-36,3;CL:0000710,1.10e-28,20;CL:0000075,4.09e-21,27;CL:0002077,1.18e-16,34;CL:0002566,2.62e-13,1;CL:0000333,4.82e-13,41;CL:0000133,5.25e-09,59;CL:0000066,1.62e-08,253;CL:0000221,2.63e-07,72;CL:0002600,4.98e-07,2|ontology_enrichment_development_v019=UBERON:0008947;6.83e-10;29|ontology_enrichment_disease=DOID:1909!3.70e-12!2;DOID:0050687!7.97e-09!143;DOID:305!8.41e-09!106;DOID:4556!3.76e-08!3|ontology_enrichment_disease_v019=DOID:1909;4.98e-07;2|ontology_enrichment_disease_v019_2=DOID:1909,5.60e-07,2|ontology_enrichment_uberon=UBERON:0001737!1.65e-49!9;UBERON:0001557!8.21e-28!19;UBERON:0008947!6.70e-19!38;UBERON:0003258!6.70e-19!38;UBERON:0000072!7.19e-18!46;UBERON:0000065!3.67e-15!53;UBERON:0001004!1.79e-10!72;UBERON:0000002!9.97e-09!6;UBERON:0001560!9.97e-09!6;UBERON:0000063!2.39e-08!97;UBERON:0001041!5.00e-07!98|ontology_enrichment_uberon_v019=UBERON:0001737;7.38e-32;9!UBERON:0001557;7.38e-32;9!UBERON:0000065;1.88e-09;44!UBERON:0000072;3.83e-09;37|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.70e-32,9;UBERON:0001557,3.86e-15,19;UBERON:0008947,1.39e-10,38;UBERON:0003258,1.39e-10,38;UBERON:0000072,1.73e-08,47;UBERON:0000065,2.44e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,1.18009283054671,0.723033089650446,2.09558548191549,1.52515610864684,0.474541238222193,0.674156540800822,1.37355025587742,3.46272441251751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.763076752726,23.3012939590549,21.0991404978085,18.8179690624976,33.9330725920968,6.9078903304101,4.57322292208925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,2.99944626996164,3.50828722013691,3.03827191096874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0|short_description=p6@MFSD12}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=126321 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28299 | |||
|TSSclassifier=W | |||
|UniProt=Q6NUT3,E9PAJ8,A8MXP7 | |||
|association_with_transcript=-457bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_6_at_MFSD12_5end | |||
|id=chr19:3558028..3558043,- | |||
|ontology_enrichment_celltype=CL:0000148!1.96e-28!10;CL:0000541!1.96e-28!10;CL:0000147!4.75e-20!14;CL:0002567!1.15e-18!3;CL:0002150!3.66e-18!3;CL:0000861!3.66e-18!3;CL:0000710!9.42e-14!20;CL:0000453!3.20e-10!5;CL:0000075!6.14e-10!27;CL:0000451!4.92e-08!10;CL:0002077!5.88e-08!33;CL:0002566!2.66e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000148;8.70e-58;10!CL:0000147;3.62e-41;14!CL:0002567;1.29e-36;3!CL:0000710;1.10e-28;20!CL:0000075;4.09e-21;27!CL:0002077;9.17e-15;34!CL:0002566;2.62e-13;1!CL:0002600;4.98e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.71e-58,10;CL:0000541,8.71e-58,10;CL:0000147,3.62e-41,14;CL:0002567,1.29e-36,3;CL:0000710,1.10e-28,20;CL:0000075,4.09e-21,27;CL:0002077,1.18e-16,34;CL:0002566,2.62e-13,1;CL:0000333,4.82e-13,41;CL:0000133,5.25e-09,59;CL:0000066,1.62e-08,253;CL:0000221,2.63e-07,72;CL:0002600,4.98e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.83e-10;29 | |||
|ontology_enrichment_disease=DOID:1909!3.70e-12!2;DOID:0050687!7.97e-09!143;DOID:305!8.41e-09!106;DOID:4556!3.76e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.98e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.60e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.65e-49!9;UBERON:0001557!8.21e-28!19;UBERON:0008947!6.70e-19!38;UBERON:0003258!6.70e-19!38;UBERON:0000072!7.19e-18!46;UBERON:0000065!3.67e-15!53;UBERON:0001004!1.79e-10!72;UBERON:0000002!9.97e-09!6;UBERON:0001560!9.97e-09!6;UBERON:0000063!2.39e-08!97;UBERON:0001041!5.00e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.38e-32;9!UBERON:0001557;7.38e-32;9!UBERON:0000065;1.88e-09;44!UBERON:0000072;3.83e-09;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.70e-32,9;UBERON:0001557,3.86e-15,19;UBERON:0008947,1.39e-10,38;UBERON:0003258,1.39e-10,38;UBERON:0000072,1.73e-08,47;UBERON:0000065,2.44e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,1.18009283054671,0.723033089650446,2.09558548191549,1.52515610864684,0.474541238222193,0.674156540800822,1.37355025587742,3.46272441251751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.763076752726,23.3012939590549,21.0991404978085,18.8179690624976,33.9330725920968,6.9078903304101,4.57322292208925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,2.99944626996164,3.50828722013691,3.03827191096874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p6@MFSD12 | |||
}} |
Revision as of 20:04, 11 September 2013
Short description: | p6@MFSD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_MFSD12_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -457bp_to_ENST00000355415, ENST00000389395, ENST00000398558, NM_001042680, NM_021731, NM_174983, uc002lxw.2, uc002lxx.2, uc002lxz.2_5end |
EntrezGene: | MFSD12 |
HGNC: | 28299 |
UniProt: | Q6NUT3E9PAJ8A8MXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.71e-58 | 10 |
melanoblast | 8.71e-58 | 10 |
pigment cell | 3.62e-41 | 14 |
light melanocyte | 1.29e-36 | 3 |
neurecto-epithelial cell | 1.10e-28 | 20 |
columnar/cuboidal epithelial cell | 4.09e-21 | 27 |
ecto-epithelial cell | 1.18e-16 | 34 |
dark melanocyte | 2.62e-13 | 1 |
migratory neural crest cell | 4.82e-13 | 41 |
neurectodermal cell | 5.25e-09 | 59 |
epithelial cell | 1.62e-08 | 253 |
ectodermal cell | 2.63e-07 | 72 |
smooth muscle cell of trachea | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.70e-32 | 9 |
upper respiratory tract | 3.86e-15 | 19 |
respiratory primordium | 1.39e-10 | 38 |
endoderm of foregut | 1.39e-10 | 38 |
segment of respiratory tract | 1.73e-08 | 47 |
respiratory tract | 2.44e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.60e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.