FFCP PHASE1:Hg19::chr19:1790833..1790855,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=148229|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13535|TSSclassifier=S|UniProt=|association_with_transcript=-17bp_to_ENST00000526847_5end|description=CAGE_peak_4_at_ATP8B3_5end|id=chr19:1790833..1790855,-|ontology_enrichment_celltype=CL:0002322!1.08e-20!5;CL:0000540!6.88e-07!6;CL:0000031!6.88e-07!6;CL:0000404!6.88e-07!6|ontology_enrichment_celltype_v019=CL:0000039;2.51e-12;7!CL:0000586;2.51e-12;7!CL:0000322;4.52e-08;3!CL:0000214;7.26e-08;3|ontology_enrichment_celltype_v019_2=CL:0000039,2.82e-12,7;CL:0000586,2.82e-12,7;CL:0000322,4.52e-08,3;CL:0000214,6.78e-08,3|ontology_enrichment_development_v019=UBERON:0009117;6.53e-09;10!UBERON:0005564;6.53e-09;10|ontology_enrichment_disease=DOID:3493!1.19e-09!2|ontology_enrichment_disease_v019=DOID:6193;3.12e-21;1!DOID:3908;3.95e-17;5!DOID:3910;1.82e-11;2!DOID:3350;2.60e-11;2!DOID:3493;3.70e-11;2!DOID:3905;5.93e-10;9!DOID:4556;4.84e-08;3|ontology_enrichment_disease_v019_2=DOID:6193,3.45e-21,1;DOID:3908,3.95e-17,5;DOID:3910,1.82e-11,2;DOID:3350,2.73e-11,2;DOID:3493,4.09e-11,2;DOID:3905,5.93e-10,9;DOID:0050687,1.63e-08,143;DOID:4556,4.84e-08,3|ontology_enrichment_uberon=UBERON:0000473!1.14e-08!8;UBERON:0005156!1.65e-07!59;UBERON:0000990!1.65e-07!59;UBERON:0002106!8.49e-07!3;UBERON:0004854!8.49e-07!3;UBERON:0009034!8.49e-07!3;UBERON:0002095!8.49e-07!3;UBERON:0004782!8.49e-07!3;UBERON:0003281!8.49e-07!3;UBERON:0009664!8.49e-07!3;UBERON:0002296!8.49e-07!3;UBERON:0005602!8.49e-07!3;UBERON:0001179!8.49e-07!3;UBERON:0006293!8.49e-07!3;UBERON:0003133!9.34e-07!48|ontology_enrichment_uberon_v019=UBERON:0004903;1.82e-11;2!UBERON:0002173;1.82e-11;2!UBERON:0002186;1.82e-11;2!UBERON:0000473;6.61e-11;8!UBERON:0003135;3.50e-08;11!UBERON:0004821;4.52e-08;3!UBERON:0007499;4.52e-08;3!UBERON:0003215;4.52e-08;3!UBERON:0010368;4.52e-08;3!UBERON:0009911;4.52e-08;3!UBERON:0002299;4.52e-08;3!UBERON:0006524;4.52e-08;3!UBERON:0008874;4.52e-08;3!UBERON:0002169;4.52e-08;3!UBERON:0004894;4.52e-08;3!UBERON:0002106;5.73e-08;3!UBERON:0006915;7.26e-08;3!UBERON:0007616;7.26e-08;3!UBERON:0002217;7.26e-08;3!UBERON:0002018;7.26e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.82e-11,2;UBERON:0002173,1.82e-11,2;UBERON:0002186,1.82e-11,2;UBERON:0000473,7.30e-11,8;UBERON:0003135,3.76e-08,11;UBERON:0004821,4.52e-08,3;UBERON:0003215,4.52e-08,3;UBERON:0010368,4.52e-08,3;UBERON:0009911,4.52e-08,3;UBERON:0002299,4.52e-08,3;UBERON:0006524,4.52e-08,3;UBERON:0008874,4.52e-08,3;UBERON:0002169,4.52e-08,3;UBERON:0004894,4.52e-08,3;UBERON:0002106,5.54e-08,3;UBERON:0004854,5.54e-08,3;UBERON:0009034,5.54e-08,3;UBERON:0002095,5.54e-08,3;UBERON:0004782,5.54e-08,3;UBERON:0003281,5.54e-08,3;UBERON:0009664,5.54e-08,3;UBERON:0002296,5.54e-08,3;UBERON:0005602,5.54e-08,3;UBERON:0001179,5.54e-08,3;UBERON:0006293,5.54e-08,3;UBERON:0006915,6.78e-08,3;UBERON:0007616,6.78e-08,3;UBERON:0002217,6.78e-08,3;UBERON:0002018,6.78e-08,3;UBERON:0004457,1.42e-07,12;UBERON:0000042,1.42e-07,12;UBERON:0004458,8.12e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.530119073285941,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,5.08507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.195984794828755,0,0,2.0638323896594,0.0967563312890851,0,0,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,1.92903778158023,0.412618309791701,0.415440338029185,0,0,0,0,0,0,4.43521413381507,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=148229 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13535 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENST00000526847_5end | |||
|description=CAGE_peak_4_at_ATP8B3_5end | |||
|id=chr19:1790833..1790855,- | |||
|ontology_enrichment_celltype=CL:0002322!1.08e-20!5;CL:0000540!6.88e-07!6;CL:0000031!6.88e-07!6;CL:0000404!6.88e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.51e-12;7!CL:0000586;2.51e-12;7!CL:0000322;4.52e-08;3!CL:0000214;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.82e-12,7;CL:0000586,2.82e-12,7;CL:0000322,4.52e-08,3;CL:0000214,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.53e-09;10!UBERON:0005564;6.53e-09;10 | |||
|ontology_enrichment_disease=DOID:3493!1.19e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:6193;3.12e-21;1!DOID:3908;3.95e-17;5!DOID:3910;1.82e-11;2!DOID:3350;2.60e-11;2!DOID:3493;3.70e-11;2!DOID:3905;5.93e-10;9!DOID:4556;4.84e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.45e-21,1;DOID:3908,3.95e-17,5;DOID:3910,1.82e-11,2;DOID:3350,2.73e-11,2;DOID:3493,4.09e-11,2;DOID:3905,5.93e-10,9;DOID:0050687,1.63e-08,143;DOID:4556,4.84e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.14e-08!8;UBERON:0005156!1.65e-07!59;UBERON:0000990!1.65e-07!59;UBERON:0002106!8.49e-07!3;UBERON:0004854!8.49e-07!3;UBERON:0009034!8.49e-07!3;UBERON:0002095!8.49e-07!3;UBERON:0004782!8.49e-07!3;UBERON:0003281!8.49e-07!3;UBERON:0009664!8.49e-07!3;UBERON:0002296!8.49e-07!3;UBERON:0005602!8.49e-07!3;UBERON:0001179!8.49e-07!3;UBERON:0006293!8.49e-07!3;UBERON:0003133!9.34e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.82e-11;2!UBERON:0002173;1.82e-11;2!UBERON:0002186;1.82e-11;2!UBERON:0000473;6.61e-11;8!UBERON:0003135;3.50e-08;11!UBERON:0004821;4.52e-08;3!UBERON:0007499;4.52e-08;3!UBERON:0003215;4.52e-08;3!UBERON:0010368;4.52e-08;3!UBERON:0009911;4.52e-08;3!UBERON:0002299;4.52e-08;3!UBERON:0006524;4.52e-08;3!UBERON:0008874;4.52e-08;3!UBERON:0002169;4.52e-08;3!UBERON:0004894;4.52e-08;3!UBERON:0002106;5.73e-08;3!UBERON:0006915;7.26e-08;3!UBERON:0007616;7.26e-08;3!UBERON:0002217;7.26e-08;3!UBERON:0002018;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.82e-11,2;UBERON:0002173,1.82e-11,2;UBERON:0002186,1.82e-11,2;UBERON:0000473,7.30e-11,8;UBERON:0003135,3.76e-08,11;UBERON:0004821,4.52e-08,3;UBERON:0003215,4.52e-08,3;UBERON:0010368,4.52e-08,3;UBERON:0009911,4.52e-08,3;UBERON:0002299,4.52e-08,3;UBERON:0006524,4.52e-08,3;UBERON:0008874,4.52e-08,3;UBERON:0002169,4.52e-08,3;UBERON:0004894,4.52e-08,3;UBERON:0002106,5.54e-08,3;UBERON:0004854,5.54e-08,3;UBERON:0009034,5.54e-08,3;UBERON:0002095,5.54e-08,3;UBERON:0004782,5.54e-08,3;UBERON:0003281,5.54e-08,3;UBERON:0009664,5.54e-08,3;UBERON:0002296,5.54e-08,3;UBERON:0005602,5.54e-08,3;UBERON:0001179,5.54e-08,3;UBERON:0006293,5.54e-08,3;UBERON:0006915,6.78e-08,3;UBERON:0007616,6.78e-08,3;UBERON:0002217,6.78e-08,3;UBERON:0002018,6.78e-08,3;UBERON:0004457,1.42e-07,12;UBERON:0000042,1.42e-07,12;UBERON:0004458,8.12e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.530119073285941,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,5.08507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.195984794828755,0,0,2.0638323896594,0.0967563312890851,0,0,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,1.92903778158023,0.412618309791701,0.415440338029185,0,0,0,0,0,0,4.43521413381507,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5510319283216,0,0,0.490751168076215,1.21917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845855261818682,2.32048396704878,0,0,0,0,0,0,0,1.89325874631822,0,0,0,0,0,0,0,0.109265571963696,0,1.01988829741982,0,3.85958578046349,0,0.303114792872958,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p4@ATP8B3 | |||
}} |
Revision as of 19:20, 11 September 2013
Short description: | p4@ATP8B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ATP8B3_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000526847_5end |
EntrezGene: | ATP8B3 |
HGNC: | 13535 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.82e-12 | 7 |
germ cell | 2.82e-12 | 7 |
pneumocyte | 4.52e-08 | 3 |
synovial cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.82e-11 | 2 |
alveolar duct | 1.82e-11 | 2 |
bronchiole | 1.82e-11 | 2 |
testis | 7.30e-11 | 8 |
male reproductive organ | 3.76e-08 | 11 |
pulmonary alveolus epithelium | 4.52e-08 | 3 |
alveolus | 4.52e-08 | 3 |
pulmonary lobule | 4.52e-08 | 3 |
lobule | 4.52e-08 | 3 |
alveolus of lung | 4.52e-08 | 3 |
alveolar system | 4.52e-08 | 3 |
pulmonary acinus | 4.52e-08 | 3 |
alveolar sac | 4.52e-08 | 3 |
alveolar wall | 4.52e-08 | 3 |
spleen | 5.54e-08 | 3 |
gastrointestinal system mesentery | 5.54e-08 | 3 |
stomach region | 5.54e-08 | 3 |
mesentery | 5.54e-08 | 3 |
gastrointestinal system serosa | 5.54e-08 | 3 |
mesentery of stomach | 5.54e-08 | 3 |
gut mesentery | 5.54e-08 | 3 |
dorsal mesentery | 5.54e-08 | 3 |
dorsal mesogastrium | 5.54e-08 | 3 |
peritoneal cavity | 5.54e-08 | 3 |
spleen primordium | 5.54e-08 | 3 |
stratified squamous epithelium | 6.78e-08 | 3 |
layer of synovial tissue | 6.78e-08 | 3 |
synovial joint | 6.78e-08 | 3 |
synovial membrane of synovial joint | 6.78e-08 | 3 |
cavity lining | 1.42e-07 | 12 |
serous membrane | 1.42e-07 | 12 |
body cavity or lining | 8.12e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.45e-21 | 1 |
non-small cell lung carcinoma | 3.95e-17 | 5 |
lung adenocarcinoma | 1.82e-11 | 2 |
mesenchymal cell neoplasm | 2.73e-11 | 2 |
signet ring cell adenocarcinoma | 4.09e-11 | 2 |
lung carcinoma | 5.93e-10 | 9 |
cell type cancer | 1.63e-08 | 143 |
lung large cell carcinoma | 4.84e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.