FFCP PHASE1:Hg19::chr19:1470728..1470744,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:1470728..1470744,-|id=chr19:1470728..1470744,-|ontology_enrichment_celltype=CL:0000066!1.14e-08!254;CL:0002539!1.70e-07!10;CL:0000223!2.34e-07!59|ontology_enrichment_celltype_v019=CL:0000317;9.58e-10;2!CL:1000448;9.58e-10;2!CL:0002308;9.58e-10;2!CL:0002140;9.58e-10;2!CL:0000815;2.28e-09;2!CL:0000792;2.28e-09;2!CL:0002677;2.28e-09;2!CL:0002368;4.78e-08;13!CL:0002231;7.55e-07;3|ontology_enrichment_celltype_v019_2=CL:0000317,1.42e-09,2;CL:1000448,1.42e-09,2;CL:0002308,1.42e-09,2;CL:0002140,1.42e-09,2;CL:0000815,1.85e-09,2;CL:0000792,1.85e-09,2;CL:0002677,1.85e-09,2;CL:0002368,3.89e-08,13;CL:0002231,5.83e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;5.94e-14;3!DOID:127;5.94e-14;3!DOID:0060072;1.40e-10;4|ontology_enrichment_disease_v019_2=DOID:0060084,4.91e-14,3;DOID:127,4.91e-14,3;DOID:0060072,1.22e-10,4|ontology_enrichment_uberon=UBERON:0004237!1.70e-07!10;UBERON:0004695!1.70e-07!10;UBERON:0002111!1.70e-07!10;UBERON:0004178!1.70e-07!10|ontology_enrichment_uberon_v019=UBERON:0002419;9.58e-10;2!UBERON:0007771;9.58e-10;2!UBERON:0003297;9.58e-10;2!UBERON:0001821;9.58e-10;2!UBERON:0003487;9.58e-10;2!UBERON:0001820;9.58e-10;2!UBERON:0005406;2.28e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.36e-09,2;UBERON:0002419,1.42e-09,2;UBERON:0007771,1.42e-09,2;UBERON:0003297,1.42e-09,2;UBERON:0001821,1.42e-09,2;UBERON:0003487,1.42e-09,2;UBERON:0001820,1.42e-09,2;UBERON:0005089,1.42e-09,2;UBERON:0005088,1.42e-09,2|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.893922188854576,1.74467704820074,0,0.631719873426831,0,0.245733936501509,0,0,0.527533956456907,0,0,0.672325146451775,1.80808358407193,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,1.50602959389125,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.616804496998528,2.00623794468814,1.62961133316795,0,0,0.557052284425868,1.47302953737419,1.55073726208535,0.541607727530031,1.15282187753108,0.780356085359269,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0.50133791063589,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0.573673241497627,0,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0.966304265816484,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,1.96565443335525,0,0,0.491953754172454,0.171567810298526,2.08525542276389,0,0.100528972411631,0.462942225792648,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,1.34385702559088,0.425325291727159,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,1.20575750823834,0,0.299918973546171,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0.303127571446259,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,1.48418066444991,0,0,0,0,0,1.69203229428271,3.80962293576241,0.920809889358963,0.114814448164607,0.364182336013434,0.262248829918848,0.451199612907412,0,0,2.92278449306521,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,1.14853107599234,2.60024098414608,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,1.65284915360978,3.65161127993702,1.27612712494584,1.71968227454435,0.929691098594572,0.31481234683064,0.6970372701606,0.616067160352178,0,2.60979897622522,2.03856641014312,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.282810863907425,1.13008116620243,1.10273068709225,0,0.876901770507525,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,0,0.0941438007767792,0.86101074534246,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,5.43852784948307,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,1.04171104434093,1.224439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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:1470728..1470744,- | |||
|id=chr19:1470728..1470744,- | |||
|ontology_enrichment_celltype=CL:0000066!1.14e-08!254;CL:0002539!1.70e-07!10;CL:0000223!2.34e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000317;9.58e-10;2!CL:1000448;9.58e-10;2!CL:0002308;9.58e-10;2!CL:0002140;9.58e-10;2!CL:0000815;2.28e-09;2!CL:0000792;2.28e-09;2!CL:0002677;2.28e-09;2!CL:0002368;4.78e-08;13!CL:0002231;7.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.42e-09,2;CL:1000448,1.42e-09,2;CL:0002308,1.42e-09,2;CL:0002140,1.42e-09,2;CL:0000815,1.85e-09,2;CL:0000792,1.85e-09,2;CL:0002677,1.85e-09,2;CL:0002368,3.89e-08,13;CL:0002231,5.83e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.94e-14;3!DOID:127;5.94e-14;3!DOID:0060072;1.40e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.91e-14,3;DOID:127,4.91e-14,3;DOID:0060072,1.22e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0004237!1.70e-07!10;UBERON:0004695!1.70e-07!10;UBERON:0002111!1.70e-07!10;UBERON:0004178!1.70e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;9.58e-10;2!UBERON:0007771;9.58e-10;2!UBERON:0003297;9.58e-10;2!UBERON:0001821;9.58e-10;2!UBERON:0003487;9.58e-10;2!UBERON:0001820;9.58e-10;2!UBERON:0005406;2.28e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.36e-09,2;UBERON:0002419,1.42e-09,2;UBERON:0007771,1.42e-09,2;UBERON:0003297,1.42e-09,2;UBERON:0001821,1.42e-09,2;UBERON:0003487,1.42e-09,2;UBERON:0001820,1.42e-09,2;UBERON:0005089,1.42e-09,2;UBERON:0005088,1.42e-09,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.893922188854576,1.74467704820074,0,0.631719873426831,0,0.245733936501509,0,0,0.527533956456907,0,0,0.672325146451775,1.80808358407193,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,1.50602959389125,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.616804496998528,2.00623794468814,1.62961133316795,0,0,0.557052284425868,1.47302953737419,1.55073726208535,0.541607727530031,1.15282187753108,0.780356085359269,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0.50133791063589,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0.573673241497627,0,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0.966304265816484,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,1.96565443335525,0,0,0.491953754172454,0.171567810298526,2.08525542276389,0,0.100528972411631,0.462942225792648,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,1.34385702559088,0.425325291727159,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,1.20575750823834,0,0.299918973546171,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0.303127571446259,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,1.48418066444991,0,0,0,0,0,1.69203229428271,3.80962293576241,0.920809889358963,0.114814448164607,0.364182336013434,0.262248829918848,0.451199612907412,0,0,2.92278449306521,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,1.14853107599234,2.60024098414608,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,1.65284915360978,3.65161127993702,1.27612712494584,1.71968227454435,0.929691098594572,0.31481234683064,0.6970372701606,0.616067160352178,0,2.60979897622522,2.03856641014312,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.282810863907425,1.13008116620243,1.10273068709225,0,0.876901770507525,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,0,0.0941438007767792,0.86101074534246,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,5.43852784948307,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,1.04171104434093,1.22443999994674,0,0.341380344856499,0,0,0,0,0,0,0.120596438625408,0,0.663475559587348,0,0,0,0.139423744278603,0.0769502585037971,0.455768223388005,0,0,0,0,0.366390373607449,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.424059214301822,0,0.995261931078505,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0,0.609414446062818,0.34945333648406,0.687944129886466,4.74106023316517,2.70430473218887,4.51635013792651,0,0,3.84167259326905,0,0,0.0633107959558787,0.195551382734803,0.160317640503067,0,1.19885765749278,0.864542502924636,0,0,0,0.49701014226173,0.942776138467182,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0,1.08089965062721,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.295282444544246,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.157363764404994,0.211200673038813,0,1.15149118391667,0.714695326373367,0,0,2.17199840701485,2.5926644736038,1.63293680054705,0,0,1.36310417428337,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665574309221114,0.0620964029413835,0.138348634936231,0,0,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0.414706207840855,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0.782982875895635,0.226705925512272,0.463044948647668,0,0.179088841081487,0,0,3.35709377297174,0,0.675769762612291,0,0,1.82315973706429,0,0,0,0,0,0,0,0,0,0,0,0,0.979156554036111,0.622077260032973,0,0,0,0,0,0,0.991486114072017,0.558644917973244,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.397832444232549,0.225630985047772,0.20170506870352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| |||
|short_description=p@chr19:1470728..1470744,- | |||
}} |
Revision as of 19:06, 11 September 2013
Short description: | p@chr19:1470728..1470744, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:1470728..1470744, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.42e-09 | 2 |
epithelial cell of sweat gland | 1.42e-09 | 2 |
epithelial cell of skin gland | 1.42e-09 | 2 |
acinar cell of sebaceous gland | 1.42e-09 | 2 |
regulatory T cell | 1.85e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.85e-09 | 2 |
naive regulatory T cell | 1.85e-09 | 2 |
respiratory epithelial cell | 3.89e-08 | 13 |
epithelial cell of prostate | 5.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.36e-09 | 2 |
skin gland | 1.42e-09 | 2 |
epidermis gland | 1.42e-09 | 2 |
gland of integumental system | 1.42e-09 | 2 |
sebaceous gland | 1.42e-09 | 2 |
skin sebaceous gland | 1.42e-09 | 2 |
sweat gland | 1.42e-09 | 2 |
sweat gland placode | 1.42e-09 | 2 |
sebaceous gland placode | 1.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.91e-14 | 3 |
leiomyoma | 4.91e-14 | 3 |
benign neoplasm | 1.22e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.