FFCP PHASE1:Hg19::chr18:72922811..72922827,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10194 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10669 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZSZ6 | |||
|association_with_transcript=80bp_to_NM_005786,uc002lly.2_5end | |||
|description=CAGE_peak_1_at_TSHZ1_5end | |||
|id=chr18:72922811..72922827,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.36e-07!18;CL:0000789!5.36e-07!18;CL:0002420!5.36e-07!18;CL:0002419!5.36e-07!18;CL:0000790!5.36e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.06e-07;18!CL:0000789;4.06e-07;18!CL:0002419;4.06e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.98e-07,18;CL:0000789,4.98e-07,18;CL:0002420,4.98e-07,18;CL:0002419,4.98e-07,18;CL:0000790,4.98e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.06e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;3.06e-11;53!UBERON:0002616;3.06e-11;53!UBERON:0002780;3.99e-11;41!UBERON:0001890;3.99e-11;41!UBERON:0002619;6.74e-11;22!UBERON:0001869;7.41e-11;32!UBERON:0002791;7.84e-11;32!UBERON:0003528;8.23e-11;34!UBERON:0002020;8.23e-11;34!UBERON:0001893;1.49e-10;34!UBERON:0007023;1.74e-10;114!UBERON:0001950;5.60e-10;20!UBERON:0000956;1.85e-09;25!UBERON:0000203;1.85e-09;25!UBERON:0001017;1.70e-08;75!UBERON:0000955;2.88e-08;68!UBERON:0001016;2.22e-07;83 | |||
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| |||
|short_description=p1@TSHZ1 | |||
}} |
Revision as of 18:11, 11 September 2013
Short description: | p1@TSHZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TSHZ1_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_NM_005786, uc002lly.2_5end |
EntrezGene: | TSHZ1 |
HGNC: | 10669 |
UniProt: | Q6ZSZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.98e-07 | 18 |
alpha-beta T cell | 4.98e-07 | 18 |
immature T cell | 4.98e-07 | 18 |
mature T cell | 4.98e-07 | 18 |
immature alpha-beta T cell | 4.98e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.01e-37 | 114 |
neural tube | 1.77e-21 | 56 |
neural rod | 1.77e-21 | 56 |
future spinal cord | 1.77e-21 | 56 |
neural keel | 1.77e-21 | 56 |
regional part of nervous system | 1.15e-19 | 53 |
regional part of brain | 1.15e-19 | 53 |
brain | 1.13e-17 | 68 |
future brain | 1.13e-17 | 68 |
central nervous system | 7.64e-17 | 81 |
regional part of forebrain | 3.95e-15 | 41 |
forebrain | 3.95e-15 | 41 |
anterior neural tube | 3.95e-15 | 41 |
future forebrain | 3.95e-15 | 41 |
nervous system | 6.25e-15 | 89 |
brain grey matter | 1.28e-12 | 34 |
gray matter | 1.28e-12 | 34 |
telencephalon | 1.57e-12 | 34 |
neurectoderm | 4.44e-12 | 86 |
regional part of telencephalon | 4.94e-12 | 32 |
neural plate | 5.13e-12 | 82 |
presumptive neural plate | 5.13e-12 | 82 |
cerebral hemisphere | 5.29e-12 | 32 |
regional part of cerebral cortex | 6.18e-11 | 22 |
neocortex | 5.07e-10 | 20 |
cerebral cortex | 1.59e-09 | 25 |
pallium | 1.59e-09 | 25 |
posterior neural tube | 1.20e-07 | 15 |
chordal neural plate | 1.20e-07 | 15 |
pre-chordal neural plate | 4.92e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.