FFCP PHASE1:Hg19::chr18:69246146..69246156,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100505776|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=35bp_to_NR_038325,NR_038326,uc002lks.1,uc002lkt.1_5end|coexpression_cluster_id=C117|description=CAGE_peak_3_at_LOC100505776_5end|id=chr18:69246146..69246156,-|ontology_enrichment_celltype=CL:0000313!1.07e-23!1;CL:0000159!1.48e-12!2;CL:0002541!9.66e-09!3|ontology_enrichment_celltype_v019=CL:0000313;9.37e-99;1!CL:0000159;2.74e-50;2|ontology_enrichment_celltype_v019_2=CL:0000313,9.37e-99,1;CL:0000159,2.74e-50,2|ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10!UBERON:0005795;3.02e-11;10|ontology_enrichment_disease=DOID:2152!1.07e-23!1;DOID:4468!2.59e-12!2|ontology_enrichment_disease_v019=DOID:2152;9.37e-99;1!DOID:2394;1.86e-08;14|ontology_enrichment_disease_v019_2=DOID:2152,9.37e-99,1;DOID:2394,1.86e-08,14|ontology_enrichment_uberon=UBERON:0004911!1.07e-23!1;UBERON:0006834!1.34e-23!1;UBERON:0005795!2.16e-16!22;UBERON:0003124!1.40e-13!7;UBERON:0004909!1.48e-12!2;UBERON:0000995!4.30e-10!21;UBERON:0003134!5.87e-10!37;UBERON:0000474!5.87e-10!37;UBERON:0003975!1.16e-09!22;UBERON:0003100!5.07e-09!41;UBERON:0000476!9.66e-09!3;UBERON:0000920!9.66e-09!3;UBERON:0004175!1.41e-08!25;UBERON:0003133!9.38e-08!48;UBERON:0005631!2.95e-07!14;UBERON:0000158!2.95e-07!14;UBERON:0001987!9.11e-07!4;UBERON:0004340!9.11e-07!4|ontology_enrichment_uberon_v019=UBERON:0004911;9.37e-99;1!UBERON:0006834;2.55e-98;1!UBERON:0004909;2.74e-50;2!UBERON:0000474;1.64e-10;37!UBERON:0003134;1.64e-10;33!UBERON:0000992;5.28e-09;13!UBERON:0003100;3.54e-08;41!UBERON:0003133;3.40e-07;44!UBERON:0000995;3.58e-07;17!UBERON:0003975;7.60e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.37e-99,1;UBERON:0006834,2.55e-98,1;UBERON:0004909,2.74e-50,2;UBERON:0003134,5.76e-12,37;UBERON:0000474,5.76e-12,37;UBERON:0003100,6.32e-11,41;UBERON:0003133,1.62e-09,48;UBERON:0000992,5.28e-09,13;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4226518157351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81155321620593,0.406896178315738,0,0,0|short_description=p3@LOC100505776}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=100505776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=35bp_to_NR_038325,NR_038326,uc002lks.1,uc002lkt.1_5end | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_3_at_LOC100505776_5end | |||
|id=chr18:69246146..69246156,- | |||
|ontology_enrichment_celltype=CL:0000313!1.07e-23!1;CL:0000159!1.48e-12!2;CL:0002541!9.66e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000313;9.37e-99;1!CL:0000159;2.74e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.37e-99,1;CL:0000159,2.74e-50,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10!UBERON:0005795;3.02e-11;10 | |||
|ontology_enrichment_disease=DOID:2152!1.07e-23!1;DOID:4468!2.59e-12!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;9.37e-99;1!DOID:2394;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.37e-99,1;DOID:2394,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004911!1.07e-23!1;UBERON:0006834!1.34e-23!1;UBERON:0005795!2.16e-16!22;UBERON:0003124!1.40e-13!7;UBERON:0004909!1.48e-12!2;UBERON:0000995!4.30e-10!21;UBERON:0003134!5.87e-10!37;UBERON:0000474!5.87e-10!37;UBERON:0003975!1.16e-09!22;UBERON:0003100!5.07e-09!41;UBERON:0000476!9.66e-09!3;UBERON:0000920!9.66e-09!3;UBERON:0004175!1.41e-08!25;UBERON:0003133!9.38e-08!48;UBERON:0005631!2.95e-07!14;UBERON:0000158!2.95e-07!14;UBERON:0001987!9.11e-07!4;UBERON:0004340!9.11e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;9.37e-99;1!UBERON:0006834;2.55e-98;1!UBERON:0004909;2.74e-50;2!UBERON:0000474;1.64e-10;37!UBERON:0003134;1.64e-10;33!UBERON:0000992;5.28e-09;13!UBERON:0003100;3.54e-08;41!UBERON:0003133;3.40e-07;44!UBERON:0000995;3.58e-07;17!UBERON:0003975;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.37e-99,1;UBERON:0006834,2.55e-98,1;UBERON:0004909,2.74e-50,2;UBERON:0003134,5.76e-12,37;UBERON:0000474,5.76e-12,37;UBERON:0003100,6.32e-11,41;UBERON:0003133,1.62e-09,48;UBERON:0000992,5.28e-09,13;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4226518157351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81155321620593,0.406896178315738,0,0,0 | |||
|short_description=p3@LOC100505776 | |||
}} |
Revision as of 18:07, 11 September 2013
Short description: | p3@LOC100505776 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOC100505776_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 35bp_to_NR_038325, NR_038326, uc002lks.1, uc002lkt.1_5end |
EntrezGene: | LOC100505776 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.37e-99 | 1 |
seromucus secreting cell | 2.74e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 9.37e-99 | 1 |
uterus or analog | 2.55e-98 | 1 |
epithelium of gonad | 2.74e-50 | 2 |
female reproductive organ | 5.76e-12 | 37 |
female reproductive system | 5.76e-12 | 37 |
female organism | 6.32e-11 | 41 |
reproductive organ | 1.62e-09 | 48 |
female gonad | 5.28e-09 | 13 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.37e-99 | 1 |
ovarian cancer | 1.86e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.