FFCP PHASE1:Hg19::chr18:52988952..52988965,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6925|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11634|TSSclassifier=S|UniProt=G0LNU9,G0LNV0|association_with_transcript=3bp_to_FR748220,FR748221_5end|coexpression_cluster_id=C2464|description=CAGE_peak_23_at_TCF4_5end|id=chr18:52988952..52988965,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002138;1.55e-07;6|ontology_enrichment_celltype_v019_2=CL:0000047,1.86e-08,8;CL:0005020,2.34e-07,6;CL:0002138,2.34e-07,6;CL:0005022,2.34e-07,6|ontology_enrichment_development_v019=CL:0005022;1.55e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.70e-27!94;UBERON:0001016!7.70e-27!94;UBERON:0001017!1.42e-26!82;UBERON:0001049!2.24e-25!57;UBERON:0005068!2.24e-25!57;UBERON:0006241!2.24e-25!57;UBERON:0007135!2.24e-25!57;UBERON:0005743!4.22e-25!86;UBERON:0002616!5.43e-24!59;UBERON:0000955!1.64e-23!69;UBERON:0006238!1.64e-23!69;UBERON:0002020!1.09e-20!34;UBERON:0003528!1.09e-20!34;UBERON:0003080!1.52e-20!42;UBERON:0001893!1.81e-20!34;UBERON:0007023!2.36e-20!115;UBERON:0001869!5.97e-20!32;UBERON:0002791!7.71e-20!33;UBERON:0002780!7.81e-20!41;UBERON:0001890!7.81e-20!41;UBERON:0006240!7.81e-20!41;UBERON:0002346!7.23e-19!90;UBERON:0003075!1.01e-16!86;UBERON:0007284!1.01e-16!86;UBERON:0000956!2.34e-16!25;UBERON:0000203!2.34e-16!25;UBERON:0000924!2.86e-16!173;UBERON:0006601!2.86e-16!173;UBERON:0002619!8.44e-15!22;UBERON:0004121!1.46e-14!169;UBERON:0000153!1.39e-13!129;UBERON:0007811!1.39e-13!129;UBERON:0000033!1.88e-13!123;UBERON:0001950!2.81e-13!20;UBERON:0003056!3.00e-13!61;UBERON:0000477!1.50e-07!286;UBERON:0004111!8.58e-07!241|ontology_enrichment_uberon_v019=UBERON:0002619;1.76e-35;22!UBERON:0000956;1.98e-34;25!UBERON:0000203;1.98e-34;25!UBERON:0001950;3.46e-31;20!UBERON:0001869;1.20e-30;32!UBERON:0002791;7.40e-29;32!UBERON:0003528;3.70e-28;34!UBERON:0002020;3.70e-28;34!UBERON:0001893;1.87e-27;34!UBERON:0002780;1.58e-20;41!UBERON:0001890;1.58e-20;41!UBERON:0000200;7.61e-15;6!UBERON:0000073;1.01e-14;53!UBERON:0002616;1.01e-14;53!UBERON:0001017;8.33e-12;75!UBERON:0000955;1.64e-11;68!UBERON:0001016;5.67e-10;83!UBERON:0001871;1.93e-09;6!UBERON:0002021;1.39e-08;5!UBERON:0000349;2.30e-08;5!UBERON:0001872;2.61e-08;5!UBERON:0001870;4.29e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.65e-36,22;UBERON:0001869,8.84e-35,32;UBERON:0000956,1.14e-34,25;UBERON:0000203,1.14e-34,25;UBERON:0003528,1.94e-32,34;UBERON:0002020,1.94e-32,34;UBERON:0001893,2.07e-32,34;UBERON:0002791,7.30e-32,32;UBERON:0001950,2.18e-31,20;UBERON:0002780,2.52e-28,41;UBERON:0001890,2.52e-28,41;UBERON:0003080,2.52e-28,41;UBERON:0006240,2.52e-28,41;UBERON:0001017,2.62e-28,81;UBERON:0001016,3.34e-28,89;UBERON:0000073,1.87e-24,53;UBERON:0002616,1.87e-24,53;UBERON:0000955,2.26e-24,68;UBERON:0006238,2.26e-24,68;UBERON:0001049,8.79e-23,56;UBERON:0005068,8.79e-23,56;UBERON:0006241,8.79e-23,56;UBERON:0007135,8.79e-23,56;UBERON:0003056,5.04e-17,61;UBERON:0002346,1.36e-16,86;UBERON:0000200,6.37e-15,6;UBERON:0004121,9.71e-15,171;UBERON:0000924,9.71e-15,171;UBERON:0006601,9.71e-15,171;UBERON:0003075,1.94e-13,82;UBERON:0007284,1.94e-13,82;UBERON:0011216,3.04e-10,223;UBERON:0001871,2.01e-09,6;UBERON:0010371,2.99e-09,104;UBERON:0000349,1.18e-08,5;UBERON:0002021,1.69e-08,5;UBERON:0001872,1.95e-08,5;UBERON:0001870,2.59e-08,3;UBERON:0010314,2.40e-07,132;UBERON:0007023,5.90e-07,114|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994192127183747,1.34465029290355,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0,2.0036519099174,0.684372125364421,0.502170558379211,0.458480434487708,1.06730766284929,0.865818594450472,0,0,0.154816123316076,0,0,0,0.0774672005803016,1.56386155736164,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0.870627715885752,0,0,0,0,0,3.02699751316684,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0,0.392937226493138,0,0,0,0.174129737299267,0,1.19245312152671,0.571994910780128,0.371457501329565,0.79504962946682,0,0,0.56530794192401,0,0.550236083880135,0.417989933073621,0.258416759169329,0.71153252537342,1.00416183829401,3.22263453687318,0.760272105718513,4.14905497831888,0.367663080345869,0,0,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,1.36221684880438,1.72852777344,0.234321431833797,0.312160076830321,0,0.149448680551801,0.587172493218824,0.971237666208789,0.561803226808994,0.61246251376468,0.122834317311768,0.723280468230358,0,0.989067717114227,0,0,0,0.375355559615893,1.10825646193673,0,0,0.901428353439581,0,0.717558542755448,0.427114777637135,0,0,0.412210116953756,0.257640540045629,0.1861168563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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |||
|TSSclassifier=S | |||
|UniProt=G0LNU9,G0LNV0 | |||
|association_with_transcript=3bp_to_FR748220,FR748221_5end | |||
|coexpression_cluster_id=C2464 | |||
|description=CAGE_peak_23_at_TCF4_5end | |||
|id=chr18:52988952..52988965,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.86e-08,8;CL:0005020,2.34e-07,6;CL:0002138,2.34e-07,6;CL:0005022,2.34e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.55e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.70e-27!94;UBERON:0001016!7.70e-27!94;UBERON:0001017!1.42e-26!82;UBERON:0001049!2.24e-25!57;UBERON:0005068!2.24e-25!57;UBERON:0006241!2.24e-25!57;UBERON:0007135!2.24e-25!57;UBERON:0005743!4.22e-25!86;UBERON:0002616!5.43e-24!59;UBERON:0000955!1.64e-23!69;UBERON:0006238!1.64e-23!69;UBERON:0002020!1.09e-20!34;UBERON:0003528!1.09e-20!34;UBERON:0003080!1.52e-20!42;UBERON:0001893!1.81e-20!34;UBERON:0007023!2.36e-20!115;UBERON:0001869!5.97e-20!32;UBERON:0002791!7.71e-20!33;UBERON:0002780!7.81e-20!41;UBERON:0001890!7.81e-20!41;UBERON:0006240!7.81e-20!41;UBERON:0002346!7.23e-19!90;UBERON:0003075!1.01e-16!86;UBERON:0007284!1.01e-16!86;UBERON:0000956!2.34e-16!25;UBERON:0000203!2.34e-16!25;UBERON:0000924!2.86e-16!173;UBERON:0006601!2.86e-16!173;UBERON:0002619!8.44e-15!22;UBERON:0004121!1.46e-14!169;UBERON:0000153!1.39e-13!129;UBERON:0007811!1.39e-13!129;UBERON:0000033!1.88e-13!123;UBERON:0001950!2.81e-13!20;UBERON:0003056!3.00e-13!61;UBERON:0000477!1.50e-07!286;UBERON:0004111!8.58e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.76e-35;22!UBERON:0000956;1.98e-34;25!UBERON:0000203;1.98e-34;25!UBERON:0001950;3.46e-31;20!UBERON:0001869;1.20e-30;32!UBERON:0002791;7.40e-29;32!UBERON:0003528;3.70e-28;34!UBERON:0002020;3.70e-28;34!UBERON:0001893;1.87e-27;34!UBERON:0002780;1.58e-20;41!UBERON:0001890;1.58e-20;41!UBERON:0000200;7.61e-15;6!UBERON:0000073;1.01e-14;53!UBERON:0002616;1.01e-14;53!UBERON:0001017;8.33e-12;75!UBERON:0000955;1.64e-11;68!UBERON:0001016;5.67e-10;83!UBERON:0001871;1.93e-09;6!UBERON:0002021;1.39e-08;5!UBERON:0000349;2.30e-08;5!UBERON:0001872;2.61e-08;5!UBERON:0001870;4.29e-08;3 | |||
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| |||
|short_description=p23@TCF4 | |||
}} |
Revision as of 17:44, 11 September 2013
Short description: | p23@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_TCF4_5end |
Coexpression cluster: | C2464_lymphoma_acute_occipital_Neurons_cerebellum_small_parietal |
Association with transcript: | 3bp_to_FR748220, FR748221_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | G0LNU9G0LNV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.86e-08 | 8 |
lymphangioblast | 2.34e-07 | 6 |
endothelial cell of lymphatic vessel | 2.34e-07 | 6 |
vascular lymphangioblast | 2.34e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.