FFCP PHASE1:Hg19::chr18:44181442..44181462,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=125336|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26521|TSSclassifier=N|UniProt=Q8IVV2|association_with_transcript=163bp_to_AK127869_5end|coexpression_cluster_id=C152|description=CAGE_peak_2_at_LOXHD1_5end|id=chr18:44181442..44181462,-|ontology_enrichment_celltype=CL:0002057!1.48e-31!42;CL:0000860!6.40e-29!45;CL:0000766!1.31e-27!76;CL:0000763!2.55e-23!112;CL:0000049!2.55e-23!112;CL:0002194!6.62e-23!63;CL:0000576!6.62e-23!63;CL:0000040!6.62e-23!63;CL:0000559!6.62e-23!63;CL:0002009!5.93e-22!65;CL:0000839!2.49e-21!70;CL:0000557!6.51e-21!71;CL:0000037!6.81e-14!172;CL:0000566!6.81e-14!172;CL:0000738!2.57e-13!140;CL:0000988!1.65e-12!182;CL:0002032!2.62e-12!165;CL:0000837!2.62e-12!165;CL:0002087!4.70e-11!119;CL:0002031!1.26e-08!124;CL:0000767!1.14e-07!3;CL:0000094!3.05e-07!8;CL:0000842!3.90e-07!3|ontology_enrichment_celltype_v019=CL:0000333;1.54e-10;5!CL:0000860;2.04e-07;33!CL:0002057;2.04e-07;33|ontology_enrichment_celltype_v019_2=CL:0000860,8.21e-07,42;CL:0002057,8.21e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:171!3.87e-09!10|ontology_enrichment_disease_v019=DOID:171;1.01e-42;10!DOID:3095;2.68e-19;22!DOID:2994;2.68e-19;22!DOID:169;6.26e-09;6!DOID:3193;2.58e-07;2!DOID:962;2.58e-07;2|ontology_enrichment_disease_v019_2=DOID:171,1.01e-42,10;DOID:3095,2.68e-19,22;DOID:2994,2.68e-19,22;DOID:169,6.26e-09,6;DOID:3193,2.58e-07,2;DOID:962,2.58e-07,2|ontology_enrichment_uberon=UBERON:0002390!6.92e-25!102;UBERON:0003061!6.92e-25!102;UBERON:0002193!1.12e-21!112;UBERON:0002371!1.24e-17!80;UBERON:0001474!7.76e-16!86;UBERON:0004765!2.28e-13!101;UBERON:0001434!2.28e-13!101;UBERON:0002405!1.22e-12!115;UBERON:0001872!3.88e-07!5;UBERON:0003081!5.67e-07!216|ontology_enrichment_uberon_v019=UBERON:0002346;3.34e-48;4!UBERON:0000923;3.34e-48;4!UBERON:0010316;3.34e-48;4!UBERON:0005291;3.34e-48;4!UBERON:0002050;1.17e-38;5!UBERON:0005423;1.17e-38;5!UBERON:0000013;1.54e-10;5!UBERON:0002410;1.54e-10;5!UBERON:0003714;2.58e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.54e-10,5;UBERON:0002410,1.54e-10,5;UBERON:0003714,2.58e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0.872389432677388,0.377875943688809,0,0.697287110717054,0.411167888021826,0.929119112685311,0.863077176966451,0.768482119587302,0.47296445977717,1.72372840368309,0.645484683583826,0,0.752969358170419,0.545812300115692,0,0.306083892370903,0,0,0.989553900560148,0.199463657621632,0,0.870627715885752,0.56738522469114,0,1.50749199154046,0,0.217188844705117,1.81619850790011,1.10483290796269,1.26584954976354,0,0,0,0.673971786878971,0.300353785683013,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,1.25343916618419,0,0,0,0,0,5.15258017133647,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,6.70690610781485,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.470284307407084,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8480188132316,0,28.0058674424142,9.56587140457573,46.5998473613848,25.6976662267692,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0.620060389503552,0.0634158101939068,0,0,0,95.3222144429144,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.469919589899268,0.322289439867886,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0.186224142887574,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@LOXHD1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=125336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26521 | |||
|TSSclassifier=N | |||
|UniProt=Q8IVV2 | |||
|association_with_transcript=163bp_to_AK127869_5end | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_2_at_LOXHD1_5end | |||
|id=chr18:44181442..44181462,- | |||
|ontology_enrichment_celltype=CL:0002057!1.48e-31!42;CL:0000860!6.40e-29!45;CL:0000766!1.31e-27!76;CL:0000763!2.55e-23!112;CL:0000049!2.55e-23!112;CL:0002194!6.62e-23!63;CL:0000576!6.62e-23!63;CL:0000040!6.62e-23!63;CL:0000559!6.62e-23!63;CL:0002009!5.93e-22!65;CL:0000839!2.49e-21!70;CL:0000557!6.51e-21!71;CL:0000037!6.81e-14!172;CL:0000566!6.81e-14!172;CL:0000738!2.57e-13!140;CL:0000988!1.65e-12!182;CL:0002032!2.62e-12!165;CL:0000837!2.62e-12!165;CL:0002087!4.70e-11!119;CL:0002031!1.26e-08!124;CL:0000767!1.14e-07!3;CL:0000094!3.05e-07!8;CL:0000842!3.90e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.54e-10;5!CL:0000860;2.04e-07;33!CL:0002057;2.04e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.21e-07,42;CL:0002057,8.21e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!3.87e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.01e-42;10!DOID:3095;2.68e-19;22!DOID:2994;2.68e-19;22!DOID:169;6.26e-09;6!DOID:3193;2.58e-07;2!DOID:962;2.58e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.01e-42,10;DOID:3095,2.68e-19,22;DOID:2994,2.68e-19,22;DOID:169,6.26e-09,6;DOID:3193,2.58e-07,2;DOID:962,2.58e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.92e-25!102;UBERON:0003061!6.92e-25!102;UBERON:0002193!1.12e-21!112;UBERON:0002371!1.24e-17!80;UBERON:0001474!7.76e-16!86;UBERON:0004765!2.28e-13!101;UBERON:0001434!2.28e-13!101;UBERON:0002405!1.22e-12!115;UBERON:0001872!3.88e-07!5;UBERON:0003081!5.67e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.34e-48;4!UBERON:0000923;3.34e-48;4!UBERON:0010316;3.34e-48;4!UBERON:0005291;3.34e-48;4!UBERON:0002050;1.17e-38;5!UBERON:0005423;1.17e-38;5!UBERON:0000013;1.54e-10;5!UBERON:0002410;1.54e-10;5!UBERON:0003714;2.58e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.54e-10,5;UBERON:0002410,1.54e-10,5;UBERON:0003714,2.58e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0.872389432677388,0.377875943688809,0,0.697287110717054,0.411167888021826,0.929119112685311,0.863077176966451,0.768482119587302,0.47296445977717,1.72372840368309,0.645484683583826,0,0.752969358170419,0.545812300115692,0,0.306083892370903,0,0,0.989553900560148,0.199463657621632,0,0.870627715885752,0.56738522469114,0,1.50749199154046,0,0.217188844705117,1.81619850790011,1.10483290796269,1.26584954976354,0,0,0,0.673971786878971,0.300353785683013,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,1.25343916618419,0,0,0,0,0,5.15258017133647,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,6.70690610781485,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.470284307407084,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8480188132316,0,28.0058674424142,9.56587140457573,46.5998473613848,25.6976662267692,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0.620060389503552,0.0634158101939068,0,0,0,95.3222144429144,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.469919589899268,0.322289439867886,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0.186224142887574,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@LOXHD1 | |||
}} |
Revision as of 17:34, 11 September 2013
Short description: | p2@LOXHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOXHD1_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | 163bp_to_AK127869_5end |
EntrezGene: | LOXHD1 |
HGNC: | 26521 |
UniProt: | Q8IVV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.21e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.21e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.54e-10 | 5 |
autonomic nervous system | 1.54e-10 | 5 |
neural tissue | 2.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.01e-42 | 10 |
germ cell and embryonal cancer | 2.68e-19 | 22 |
germ cell cancer | 2.68e-19 | 22 |
neuroendocrine tumor | 6.26e-09 | 6 |
peripheral nerve sheath neoplasm | 2.58e-07 | 2 |
neurofibroma | 2.58e-07 | 2 |
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