FFCP PHASE1:Hg19::chr18:7567180..7567189,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5797|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9675|TSSclassifier=S|UniProt=A7MBN1,P28827|association_with_transcript=-124bp_to_NM_001105244,NM_002845,uc002knn.3,uc010dkv.2_5end|coexpression_cluster_id=C1805|description=CAGE_peak_7_at_PTPRM_5end|id=chr18:7567180..7567189,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;1.31e-08;4!UBERON:0007284;1.31e-08;4!UBERON:0003104;1.41e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.26e-17!115;UBERON:0005743!4.53e-11!86;UBERON:0000477!1.18e-10!286;UBERON:0001017!1.25e-10!82;UBERON:0000475!1.81e-10!365;UBERON:0004111!5.70e-10!241;UBERON:0000468!1.26e-09!659;UBERON:0000955!1.31e-09!69;UBERON:0006238!1.31e-09!69;UBERON:0002616!1.48e-09!59;UBERON:0001049!4.83e-09!57;UBERON:0005068!4.83e-09!57;UBERON:0006241!4.83e-09!57;UBERON:0007135!4.83e-09!57;UBERON:0000073!5.24e-09!94;UBERON:0001016!5.24e-09!94;UBERON:0000153!5.79e-08!129;UBERON:0007811!5.79e-08!129;UBERON:0000033!1.25e-07!123;UBERON:0000467!1.60e-07!625;UBERON:0004121!1.64e-07!169;UBERON:0000480!2.19e-07!626;UBERON:0000481!3.17e-07!347;UBERON:0003075!4.03e-07!86;UBERON:0007284!4.03e-07!86;UBERON:0003080!7.60e-07!42;UBERON:0000062!9.23e-07!511;UBERON:0000924!9.52e-07!173;UBERON:0006601!9.52e-07!173|ontology_enrichment_uberon_v019=UBERON:0001443;1.66e-08;11!UBERON:0006947;2.96e-07;3!UBERON:0004054;2.96e-07;3!UBERON:0003978;4.07e-07;3!UBERON:0000946;4.07e-07;3!UBERON:0000310;6.71e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0001443,1.16e-08,11;UBERON:0003978,1.82e-07,3;UBERON:0009751,1.82e-07,3;UBERON:0000946,1.82e-07,3;UBERON:0002523,1.82e-07,3;UBERON:0005983,1.82e-07,3;UBERON:0002165,1.82e-07,3;UBERON:0002062,1.82e-07,3;UBERON:0007280,1.82e-07,3;UBERON:0000310,4.70e-07,10;UBERON:0006947,5.19e-07,3;UBERON:0004054,5.19e-07,3;UBERON:0007023,9.58e-07,114|phase1_expression=2.36181893051724,3.8538094300377,0.845726424575827,2.00146596706261,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0.527533956456907,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0.369363174230364,0,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.290796477559129,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.736555271975129,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0.973269740605272,0.0945348171640679,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,1.38856200643038,0,1.25849830862972,0,0.417989933073621,1.03366703667732,2.13459757612026,1.67360306382335,0,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,1.12264686313085,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.633152558322899,0.662045904066094,0.860509862246441,0,0.560677600142307,0,0.49333509683432,0,0.538842688278752,0,1.05950199351452,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.561803226808994,0.204154171254893,0.122834317311768,0.619954687054593,1.18800285728205,1.48360157567134,0,0.718618141816238,0,0,0,0.438977620880838,0.30648779579902,0.901428353439581,0.113432183160021,1.25572744982203,1.2813443329114,0.423863802319124,0,0.309157587715317,2.06112432036503,0.18611685633159,1.0126579934476,0.0974370051611986,1.26216887122057,0.644349290496095,0.161646056818812,1.77504796258307,0.604512589365842,0.508681776931463,0,0,0.573609190778008,0.121973706129595,0,0,0,0,0,0,3.21620469096443,0,0.928735856063958,0,0.354920400119532,0.168584690078102,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,1.96565443335525,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.12624243342638,0.698476837213859,0.381988425558278,3.51652341630141,0,2.15937734676979,0.300343057843917,2.28661146104463,0.672786506072164,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0.531876233169741,0,0,1.41849132023278,0.266422179016099,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0.197030760201927,0,0.128343036279748,0.254094624222463,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0.36807447515742,0,0.542530047399471,1.66376689224646,2.14114786556594,3.31175071571263,1.40569697991256,0,0,2.0694614258501,0,0.184369168541703,0.260650843404249,0,0,0.413536052245775,0.215714200818617,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5797 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9675 | |||
|TSSclassifier=S | |||
|UniProt=A7MBN1,P28827 | |||
|association_with_transcript=-124bp_to_NM_001105244,NM_002845,uc002knn.3,uc010dkv.2_5end | |||
|coexpression_cluster_id=C1805 | |||
|description=CAGE_peak_7_at_PTPRM_5end | |||
|id=chr18:7567180..7567189,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.31e-08;4!UBERON:0007284;1.31e-08;4!UBERON:0003104;1.41e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-17!115;UBERON:0005743!4.53e-11!86;UBERON:0000477!1.18e-10!286;UBERON:0001017!1.25e-10!82;UBERON:0000475!1.81e-10!365;UBERON:0004111!5.70e-10!241;UBERON:0000468!1.26e-09!659;UBERON:0000955!1.31e-09!69;UBERON:0006238!1.31e-09!69;UBERON:0002616!1.48e-09!59;UBERON:0001049!4.83e-09!57;UBERON:0005068!4.83e-09!57;UBERON:0006241!4.83e-09!57;UBERON:0007135!4.83e-09!57;UBERON:0000073!5.24e-09!94;UBERON:0001016!5.24e-09!94;UBERON:0000153!5.79e-08!129;UBERON:0007811!5.79e-08!129;UBERON:0000033!1.25e-07!123;UBERON:0000467!1.60e-07!625;UBERON:0004121!1.64e-07!169;UBERON:0000480!2.19e-07!626;UBERON:0000481!3.17e-07!347;UBERON:0003075!4.03e-07!86;UBERON:0007284!4.03e-07!86;UBERON:0003080!7.60e-07!42;UBERON:0000062!9.23e-07!511;UBERON:0000924!9.52e-07!173;UBERON:0006601!9.52e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001443;1.66e-08;11!UBERON:0006947;2.96e-07;3!UBERON:0004054;2.96e-07;3!UBERON:0003978;4.07e-07;3!UBERON:0000946;4.07e-07;3!UBERON:0000310;6.71e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001443,1.16e-08,11;UBERON:0003978,1.82e-07,3;UBERON:0009751,1.82e-07,3;UBERON:0000946,1.82e-07,3;UBERON:0002523,1.82e-07,3;UBERON:0005983,1.82e-07,3;UBERON:0002165,1.82e-07,3;UBERON:0002062,1.82e-07,3;UBERON:0007280,1.82e-07,3;UBERON:0000310,4.70e-07,10;UBERON:0006947,5.19e-07,3;UBERON:0004054,5.19e-07,3;UBERON:0007023,9.58e-07,114 | |||
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| |||
|short_description=p7@PTPRM | |||
}} |
Revision as of 18:20, 11 September 2013
Short description: | p7@PTPRM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PTPRM_5end |
Coexpression cluster: | C1805_heart_diaphragm_adipose_vagina_ductus_thyroid_mature |
Association with transcript: | -124bp_to_NM_001105244, NM_002845, uc002knn.3, uc010dkv.2_5end |
EntrezGene: | PTPRM |
HGNC: | 9675 |
UniProt: | A7MBN1P28827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest | 1.16e-08 | 11 |
valve | 1.82e-07 | 3 |
cardiac mesenchyme | 1.82e-07 | 3 |
cardial valve | 1.82e-07 | 3 |
tunica intima | 1.82e-07 | 3 |
heart layer | 1.82e-07 | 3 |
endocardium | 1.82e-07 | 3 |
endocardial cushion | 1.82e-07 | 3 |
presumptive endocardium | 1.82e-07 | 3 |
breast | 4.70e-07 | 10 |
male genital duct | 5.19e-07 | 3 |
internal male genitalia | 5.19e-07 | 3 |
adult organism | 9.58e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.