FFCP PHASE1:Hg19::chr17:79826670..79826706,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=396 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=678 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-171bp_to_BC007630_5end | |||
|description=CAGE_peak_4_at_ARHGDIA_5end | |||
|id=chr17:79826670..79826706,- | |||
|ontology_enrichment_celltype=CL:0002371!1.01e-14!591;CL:0000222!1.26e-13!119;CL:0000144!9.78e-13!625;CL:0000055!1.10e-10!180;CL:0000192!2.65e-10!42;CL:0000514!2.65e-10!42;CL:0000183!3.72e-10!59;CL:0000220!4.59e-10!246;CL:0000723!1.25e-09!436;CL:0002321!1.31e-09!248;CL:0000359!3.05e-09!32;CL:0000680!4.00e-09!57;CL:0000056!4.00e-09!57;CL:0000355!4.00e-09!57;CL:0000048!5.41e-09!430;CL:0000187!1.19e-08!54;CL:0000034!1.31e-08!444;CL:0000393!1.83e-07!60;CL:0000211!1.83e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.22e-09;32!CL:0000192;4.62e-08;43!CL:0000860;6.33e-07;33!CL:0002057;6.33e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.63e-14,121;CL:0000192,4.55e-10,43;CL:0000514,4.55e-10,43;CL:0002321,6.20e-10,250;CL:0000723,6.38e-10,433;CL:0000359,2.71e-09,32;CL:0000048,2.84e-09,427;CL:0000680,4.67e-09,58;CL:0000056,4.67e-09,58;CL:0000355,4.67e-09,58;CL:0000034,6.62e-09,441;CL:0000187,1.39e-08,55;CL:0000393,1.71e-07,61;CL:0000211,1.71e-07,61;CL:0000115,6.48e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;4.62e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;2.10e-08;42!UBERON:0003509;2.10e-08;42!UBERON:0004572;2.10e-08;42!UBERON:0007500;4.18e-08;56!UBERON:0001981;4.18e-08;56!UBERON:0004537;4.18e-08;56!UBERON:0004573;2.19e-07;33!UBERON:0004571;2.19e-07;33!UBERON:0000055;2.80e-07;65 | |||
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| |||
|short_description=p4@ARHGDIA | |||
}} |
Revision as of 16:29, 11 September 2013
Short description: | p4@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ARHGDIA_5end |
Coexpression cluster: | NA |
Association with transcript: | -171bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.63e-14 | 121 |
smooth muscle cell | 4.55e-10 | 43 |
smooth muscle myoblast | 4.55e-10 | 43 |
embryonic cell | 6.20e-10 | 250 |
somatic stem cell | 6.38e-10 | 433 |
vascular associated smooth muscle cell | 2.71e-09 | 32 |
multi fate stem cell | 2.84e-09 | 427 |
muscle precursor cell | 4.67e-09 | 58 |
myoblast | 4.67e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.67e-09 | 58 |
stem cell | 6.62e-09 | 441 |
muscle cell | 1.39e-08 | 55 |
electrically responsive cell | 1.71e-07 | 61 |
electrically active cell | 1.71e-07 | 61 |
endothelial cell | 6.48e-07 | 36 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.