FFCP PHASE1:Hg19::chr17:76662391..76662395,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2439|description=CAGE_peak_at_chr17:76662391..76662395,-|id=chr17:76662391..76662395,-|ontology_enrichment_celltype=CL:0002057!1.32e-101!42;CL:0000860!3.57e-94!45;CL:0000766!3.47e-74!76;CL:0000839!1.32e-69!70;CL:0000557!1.72e-68!71;CL:0002194!6.51e-67!63;CL:0000576!6.51e-67!63;CL:0000040!6.51e-67!63;CL:0000559!6.51e-67!63;CL:0002009!1.40e-64!65;CL:0000763!1.96e-49!112;CL:0000049!1.96e-49!112;CL:0000738!1.41e-45!140;CL:0002087!3.62e-41!119;CL:0002031!6.27e-39!124;CL:0000037!1.04e-36!172;CL:0000566!1.04e-36!172;CL:0000988!1.06e-35!182;CL:0002032!2.50e-33!165;CL:0000837!2.50e-33!165;CL:0002393!7.97e-17!9;CL:0002397!7.97e-17!9;CL:0000134!1.02e-15!358;CL:0002320!3.53e-15!365;CL:0000219!2.79e-13!390;CL:0000034!8.24e-12!444;CL:0000048!5.18e-11!430;CL:0000767!6.93e-11!3;CL:0000723!1.09e-10!436;CL:0000842!2.65e-10!3;CL:0000224!7.91e-08!4|ontology_enrichment_celltype_v019=CL:0000860;1.22e-57;33!CL:0002057;1.22e-57;33!CL:0000473;5.09e-41;39!CL:0000234;5.09e-41;39!CL:0000576;2.18e-32;48!CL:0000766;3.13e-20;69!CL:0000763;7.59e-10;100!CL:0002087;3.94e-09;104!CL:0002393;7.32e-08;6!CL:0002397;7.32e-08;6|ontology_enrichment_celltype_v019_2=CL:0000860,1.53e-61,42;CL:0002057,1.53e-61,42;CL:0000473,1.34e-53,48;CL:0000234,1.34e-53,48;CL:0002194,1.80e-42,59;CL:0000576,1.80e-42,59;CL:0000040,1.80e-42,59;CL:0000559,1.80e-42,59;CL:0002009,4.92e-41,61;CL:0000766,3.18e-39,72;CL:0000839,8.12e-38,66;CL:0000557,3.14e-37,67;CL:0000763,1.53e-25,108;CL:0000049,1.53e-25,108;CL:0002087,8.67e-24,115;CL:0000738,1.92e-22,136;CL:0002031,5.71e-20,120;CL:0000037,9.57e-18,168;CL:0000988,9.99e-17,177;CL:0002032,1.99e-16,161;CL:0000837,1.99e-16,161;CL:0000134,4.15e-07,354;CL:0002320,6.43e-07,361|ontology_enrichment_development_v019=CL:0002057;7.94e-42;42!CL:0000049;6.69e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.04e-59!80;UBERON:0001474!7.30e-55!86;UBERON:0002390!2.02e-52!102;UBERON:0003061!2.02e-52!102;UBERON:0002193!8.34e-47!112;UBERON:0004765!3.02e-45!101;UBERON:0001434!3.02e-45!101;UBERON:0002405!9.86e-43!115;UBERON:0002204!2.24e-23!167;UBERON:0003081!2.75e-20!216;UBERON:0002384!1.92e-14!375;UBERON:0000926!1.51e-08!448;UBERON:0004120!1.51e-08!448;UBERON:0006603!1.51e-08!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-32,76;UBERON:0001474,4.06e-30,82;UBERON:0002390,2.93e-28,98;UBERON:0003061,2.93e-28,98;UBERON:0004765,2.79e-27,90;UBERON:0002405,2.43e-26,93;UBERON:0002193,1.84e-25,108;UBERON:0001434,2.31e-24,100;UBERON:0002204,9.65e-14,167;UBERON:0003081,1.66e-12,203;UBERON:0000926,3.55e-07,315;UBERON:0004120,3.55e-07,315;UBERON:0006603,3.55e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,0.767658796194425,0.464448369948228,0,0,0,0,0,0,1.10799081706375,1.20326668482085,0.434021741431704,0,0,0.257575567634187,0.290796477559129,0,1.21292030593908,0.697287110717054,0.411167888021826,1.23882548358041,0.863077176966451,1.0246428261164,2.36482229888585,1.37898272294647,0.645484683583826,4.06279459783025,1.88242339542605,0.272906150057846,2.69668181334102,1.22433556948361,0.962787081228281,5.75403413219137,0.329851300186716,0.797854630486527,1.70489900213078,0.870627715885752,0.56738522469114,0.622822248995575,0.502497330513487,2.60741459210101,3.9093992046921,0,1.10483290796269,0.632924774881769,0.211255286311942,0.637812899895131,0,0.673971786878971,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2439 | |||
|description=CAGE_peak_at_chr17:76662391..76662395,- | |||
|id=chr17:76662391..76662395,- | |||
|ontology_enrichment_celltype=CL:0002057!1.32e-101!42;CL:0000860!3.57e-94!45;CL:0000766!3.47e-74!76;CL:0000839!1.32e-69!70;CL:0000557!1.72e-68!71;CL:0002194!6.51e-67!63;CL:0000576!6.51e-67!63;CL:0000040!6.51e-67!63;CL:0000559!6.51e-67!63;CL:0002009!1.40e-64!65;CL:0000763!1.96e-49!112;CL:0000049!1.96e-49!112;CL:0000738!1.41e-45!140;CL:0002087!3.62e-41!119;CL:0002031!6.27e-39!124;CL:0000037!1.04e-36!172;CL:0000566!1.04e-36!172;CL:0000988!1.06e-35!182;CL:0002032!2.50e-33!165;CL:0000837!2.50e-33!165;CL:0002393!7.97e-17!9;CL:0002397!7.97e-17!9;CL:0000134!1.02e-15!358;CL:0002320!3.53e-15!365;CL:0000219!2.79e-13!390;CL:0000034!8.24e-12!444;CL:0000048!5.18e-11!430;CL:0000767!6.93e-11!3;CL:0000723!1.09e-10!436;CL:0000842!2.65e-10!3;CL:0000224!7.91e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-57;33!CL:0002057;1.22e-57;33!CL:0000473;5.09e-41;39!CL:0000234;5.09e-41;39!CL:0000576;2.18e-32;48!CL:0000766;3.13e-20;69!CL:0000763;7.59e-10;100!CL:0002087;3.94e-09;104!CL:0002393;7.32e-08;6!CL:0002397;7.32e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.53e-61,42;CL:0002057,1.53e-61,42;CL:0000473,1.34e-53,48;CL:0000234,1.34e-53,48;CL:0002194,1.80e-42,59;CL:0000576,1.80e-42,59;CL:0000040,1.80e-42,59;CL:0000559,1.80e-42,59;CL:0002009,4.92e-41,61;CL:0000766,3.18e-39,72;CL:0000839,8.12e-38,66;CL:0000557,3.14e-37,67;CL:0000763,1.53e-25,108;CL:0000049,1.53e-25,108;CL:0002087,8.67e-24,115;CL:0000738,1.92e-22,136;CL:0002031,5.71e-20,120;CL:0000037,9.57e-18,168;CL:0000988,9.99e-17,177;CL:0002032,1.99e-16,161;CL:0000837,1.99e-16,161;CL:0000134,4.15e-07,354;CL:0002320,6.43e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.94e-42;42!CL:0000049;6.69e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.04e-59!80;UBERON:0001474!7.30e-55!86;UBERON:0002390!2.02e-52!102;UBERON:0003061!2.02e-52!102;UBERON:0002193!8.34e-47!112;UBERON:0004765!3.02e-45!101;UBERON:0001434!3.02e-45!101;UBERON:0002405!9.86e-43!115;UBERON:0002204!2.24e-23!167;UBERON:0003081!2.75e-20!216;UBERON:0002384!1.92e-14!375;UBERON:0000926!1.51e-08!448;UBERON:0004120!1.51e-08!448;UBERON:0006603!1.51e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-32,76;UBERON:0001474,4.06e-30,82;UBERON:0002390,2.93e-28,98;UBERON:0003061,2.93e-28,98;UBERON:0004765,2.79e-27,90;UBERON:0002405,2.43e-26,93;UBERON:0002193,1.84e-25,108;UBERON:0001434,2.31e-24,100;UBERON:0002204,9.65e-14,167;UBERON:0003081,1.66e-12,203;UBERON:0000926,3.55e-07,315;UBERON:0004120,3.55e-07,315;UBERON:0006603,3.55e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,0.767658796194425,0.464448369948228,0,0,0,0,0,0,1.10799081706375,1.20326668482085,0.434021741431704,0,0,0.257575567634187,0.290796477559129,0,1.21292030593908,0.697287110717054,0.411167888021826,1.23882548358041,0.863077176966451,1.0246428261164,2.36482229888585,1.37898272294647,0.645484683583826,4.06279459783025,1.88242339542605,0.272906150057846,2.69668181334102,1.22433556948361,0.962787081228281,5.75403413219137,0.329851300186716,0.797854630486527,1.70489900213078,0.870627715885752,0.56738522469114,0.622822248995575,0.502497330513487,2.60741459210101,3.9093992046921,0,1.10483290796269,0.632924774881769,0.211255286311942,0.637812899895131,0,0.673971786878971,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:76662391..76662395,- | |||
}} |
Revision as of 16:07, 11 September 2013
Short description: | p@chr17:76662391..76662395, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:76662391..76662395, - |
Coexpression cluster: | C2439_CD34_CD14_Basophils_Peripheral_Natural_CD19_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.53e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-61 | 42 |
defensive cell | 1.34e-53 | 48 |
phagocyte | 1.34e-53 | 48 |
monopoietic cell | 1.80e-42 | 59 |
monocyte | 1.80e-42 | 59 |
monoblast | 1.80e-42 | 59 |
promonocyte | 1.80e-42 | 59 |
macrophage dendritic cell progenitor | 4.92e-41 | 61 |
myeloid leukocyte | 3.18e-39 | 72 |
myeloid lineage restricted progenitor cell | 8.12e-38 | 66 |
granulocyte monocyte progenitor cell | 3.14e-37 | 67 |
myeloid cell | 1.53e-25 | 108 |
common myeloid progenitor | 1.53e-25 | 108 |
nongranular leukocyte | 8.67e-24 | 115 |
leukocyte | 1.92e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 5.71e-20 | 120 |
hematopoietic stem cell | 9.57e-18 | 168 |
hematopoietic cell | 9.99e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.99e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-16 | 161 |
mesenchymal cell | 4.15e-07 | 354 |
connective tissue cell | 6.43e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.24e-32 | 76 |
bone element | 4.06e-30 | 82 |
hematopoietic system | 2.93e-28 | 98 |
blood island | 2.93e-28 | 98 |
skeletal element | 2.79e-27 | 90 |
immune system | 2.43e-26 | 93 |
hemolymphoid system | 1.84e-25 | 108 |
skeletal system | 2.31e-24 | 100 |
musculoskeletal system | 9.65e-14 | 167 |
lateral plate mesoderm | 1.66e-12 | 203 |
mesoderm | 3.55e-07 | 315 |
mesoderm-derived structure | 3.55e-07 | 315 |
presumptive mesoderm | 3.55e-07 | 315 |
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