FFCP PHASE1:Hg19::chr17:61777459..61777502,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80774 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28142 | |||
|TSSclassifier=S | |||
|UniProt=Q9BT23 | |||
|association_with_transcript=16bp_to_ENST00000259006,NM_030576,uc002jbj.3,uc002jbk.3_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_LIMD2_5end | |||
|id=chr17:61777459..61777502,- | |||
|ontology_enrichment_celltype=CL:0000988!9.06e-45!182;CL:0000037!1.40e-42!172;CL:0000566!1.40e-42!172;CL:0002032!3.42e-39!165;CL:0000837!3.42e-39!165;CL:0000738!6.59e-39!140;CL:0002087!1.40e-38!119;CL:0002031!4.42e-33!124;CL:0000542!1.38e-22!53;CL:0000051!1.38e-22!53;CL:0000838!2.77e-22!52;CL:0002057!1.60e-20!42;CL:0000766!7.00e-18!76;CL:0000763!3.17e-17!112;CL:0000049!3.17e-17!112;CL:0000860!1.92e-16!45;CL:0000144!8.61e-15!625;CL:0002194!1.12e-14!63;CL:0000576!1.12e-14!63;CL:0000040!1.12e-14!63;CL:0000559!1.12e-14!63;CL:0002371!1.36e-14!591;CL:0000219!7.52e-14!390;CL:0000034!1.37e-13!444;CL:0000839!1.52e-13!70;CL:0002009!3.69e-13!65;CL:0000557!8.29e-13!71;CL:0000003!2.07e-12!722;CL:0000723!4.03e-12!436;CL:0000048!4.53e-12!430;CL:0000084!8.10e-12!25;CL:0000827!8.10e-12!25;CL:0000791!3.45e-11!18;CL:0000789!3.45e-11!18;CL:0002420!3.45e-11!18;CL:0002419!3.45e-11!18;CL:0000790!3.45e-11!18;CL:0002320!6.66e-11!365;CL:0000134!1.96e-10!358;CL:0000945!2.44e-10!24;CL:0000826!2.44e-10!24;CL:0000236!8.32e-09!14;CL:0000625!1.78e-07!11 | |||
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|ontology_enrichment_development_v019=CL:0002057;5.89e-15;42!CL:0000051;1.42e-13;53!CL:0000790;3.39e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.44e-21!112;UBERON:0002390!6.30e-20!102;UBERON:0003061!6.30e-20!102;UBERON:0003081!8.31e-16!216;UBERON:0002405!4.12e-12!115;UBERON:0002371!3.14e-11!80;UBERON:0002384!2.11e-10!375;UBERON:0001474!7.80e-10!86;UBERON:0000178!8.90e-09!15;UBERON:0000179!8.90e-09!15;UBERON:0000463!8.90e-09!15;UBERON:0004765!1.85e-07!101;UBERON:0001434!1.85e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.62e-09;15!UBERON:0000179;8.62e-09;15!UBERON:0000463;8.62e-09;15!UBERON:0006555;8.05e-07;15!UBERON:0004819;8.05e-07;15!UBERON:0001285;8.05e-07;15!UBERON:0007684;8.05e-07;15 | |||
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| |||
|short_description=p1@LIMD2 | |||
}} |
Revision as of 15:00, 11 September 2013
Short description: | p1@LIMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LIMD2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 16bp_to_ENST00000259006, NM_030576, uc002jbj.3, uc002jbk.3_5end |
EntrezGene: | LIMD2 |
HGNC: | 28142 |
UniProt: | Q9BT23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.15e-24 | 108 |
hematopoietic system | 3.42e-23 | 98 |
blood island | 3.42e-23 | 98 |
immune system | 1.59e-17 | 93 |
lateral plate mesoderm | 2.70e-15 | 203 |
bone marrow | 7.33e-14 | 76 |
bone element | 3.81e-12 | 82 |
skeletal element | 2.15e-11 | 90 |
connective tissue | 3.09e-11 | 371 |
skeletal system | 2.86e-09 | 100 |
blood | 8.86e-09 | 15 |
haemolymphatic fluid | 8.86e-09 | 15 |
organism substance | 8.86e-09 | 15 |
nephron epithelium | 8.13e-07 | 15 |
renal tubule | 8.13e-07 | 15 |
nephron tubule | 8.13e-07 | 15 |
nephron | 8.13e-07 | 15 |
uriniferous tubule | 8.13e-07 | 15 |
nephrogenic mesenchyme | 8.13e-07 | 15 |
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