FFCP PHASE1:Hg19::chr17:61571793..61571795,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C193|description=CAGE_peak_at_chr17:61571793..61571795,+|id=chr17:61571793..61571795,+|ontology_enrichment_celltype=CL:0002570!9.42e-09!8;CL:0000115!1.86e-07!35;CL:0000666!2.09e-07!4;CL:0002188!2.09e-07!4;CL:1000612!8.63e-07!7;CL:1000746!8.63e-07!7|ontology_enrichment_celltype_v019=CL:0002188;6.15e-17;5!CL:0000235;3.71e-14;6!CL:1000746;2.18e-12;7!CL:1000612;2.18e-12;7!CL:0002570;5.55e-11;8!CL:0002681;1.31e-07;12!CL:0002584;1.31e-07;12|ontology_enrichment_celltype_v019_2=CL:0002188,4.64e-17,5;CL:0000235,3.71e-14,6;CL:1000746,1.78e-12,7;CL:1000612,1.78e-12,7;CL:0002570,6.61e-11,8;CL:0002681,1.16e-07,12;CL:0002584,1.16e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000074!8.63e-07!7;UBERON:0001229!8.63e-07!7;UBERON:0001230!8.63e-07!7;UBERON:0005749!8.63e-07!7;UBERON:0004199!8.63e-07!7;UBERON:0004209!8.63e-07!7;UBERON:0004198!8.63e-07!7|ontology_enrichment_uberon_v019=UBERON:0001000;4.66e-21;1!UBERON:0005352;4.66e-21;1!UBERON:0000074;2.18e-12;7!UBERON:0001229;2.18e-12;7!UBERON:0003135;3.76e-08;11!UBERON:0006947;6.56e-08;3!UBERON:0004054;6.56e-08;3!UBERON:0001225;1.31e-07;12!UBERON:0008987;1.31e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001000,7.72e-21,1;UBERON:0005352,7.72e-21,1;UBERON:0010532,1.78e-12,7;UBERON:0000074,1.78e-12,7;UBERON:0001229,1.78e-12,7;UBERON:0001230,1.78e-12,7;UBERON:0003220,1.78e-12,7;UBERON:0005749,1.78e-12,7;UBERON:0004199,1.78e-12,7;UBERON:0004209,1.78e-12,7;UBERON:0004198,1.78e-12,7;UBERON:0005103,4.90e-11,8;UBERON:0000083,4.90e-11,8;UBERON:0009201,4.90e-11,8;UBERON:0006553,4.90e-11,8;UBERON:0003074,4.90e-11,8;UBERON:0003060,4.90e-11,8;UBERON:0000058,4.30e-10,19;UBERON:0000080,6.48e-10,9;UBERON:0002120,6.48e-10,9;UBERON:0004875,6.48e-10,9;UBERON:0005721,6.48e-10,9;UBERON:0005754,6.48e-10,9;UBERON:0007297,6.48e-10,9;UBERON:0004876,2.82e-08,11;UBERON:0003135,3.76e-08,11;UBERON:0006947,7.76e-08,3;UBERON:0004054,7.76e-08,3;UBERON:0001225,1.16e-07,12;UBERON:0008987,1.16e-07,12;UBERON:0003887,1.16e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0.348259474598534,1.32957960518865,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0.402829317109147,0,0.976248230192678,0,0.81014194788176,0.17859945656816,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.170093705276516,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,1.22206028986725,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0.242780379534093,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0.298509605773748,0.233713309847224,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.985123076837112,1.33982065078089,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:61571793..61571795,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_at_chr17:61571793..61571795,+ | |||
|id=chr17:61571793..61571795,+ | |||
|ontology_enrichment_celltype=CL:0002570!9.42e-09!8;CL:0000115!1.86e-07!35;CL:0000666!2.09e-07!4;CL:0002188!2.09e-07!4;CL:1000612!8.63e-07!7;CL:1000746!8.63e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002188;6.15e-17;5!CL:0000235;3.71e-14;6!CL:1000746;2.18e-12;7!CL:1000612;2.18e-12;7!CL:0002570;5.55e-11;8!CL:0002681;1.31e-07;12!CL:0002584;1.31e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,4.64e-17,5;CL:0000235,3.71e-14,6;CL:1000746,1.78e-12,7;CL:1000612,1.78e-12,7;CL:0002570,6.61e-11,8;CL:0002681,1.16e-07,12;CL:0002584,1.16e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000074!8.63e-07!7;UBERON:0001229!8.63e-07!7;UBERON:0001230!8.63e-07!7;UBERON:0005749!8.63e-07!7;UBERON:0004199!8.63e-07!7;UBERON:0004209!8.63e-07!7;UBERON:0004198!8.63e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;4.66e-21;1!UBERON:0005352;4.66e-21;1!UBERON:0000074;2.18e-12;7!UBERON:0001229;2.18e-12;7!UBERON:0003135;3.76e-08;11!UBERON:0006947;6.56e-08;3!UBERON:0004054;6.56e-08;3!UBERON:0001225;1.31e-07;12!UBERON:0008987;1.31e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,7.72e-21,1;UBERON:0005352,7.72e-21,1;UBERON:0010532,1.78e-12,7;UBERON:0000074,1.78e-12,7;UBERON:0001229,1.78e-12,7;UBERON:0001230,1.78e-12,7;UBERON:0003220,1.78e-12,7;UBERON:0005749,1.78e-12,7;UBERON:0004199,1.78e-12,7;UBERON:0004209,1.78e-12,7;UBERON:0004198,1.78e-12,7;UBERON:0005103,4.90e-11,8;UBERON:0000083,4.90e-11,8;UBERON:0009201,4.90e-11,8;UBERON:0006553,4.90e-11,8;UBERON:0003074,4.90e-11,8;UBERON:0003060,4.90e-11,8;UBERON:0000058,4.30e-10,19;UBERON:0000080,6.48e-10,9;UBERON:0002120,6.48e-10,9;UBERON:0004875,6.48e-10,9;UBERON:0005721,6.48e-10,9;UBERON:0005754,6.48e-10,9;UBERON:0007297,6.48e-10,9;UBERON:0004876,2.82e-08,11;UBERON:0003135,3.76e-08,11;UBERON:0006947,7.76e-08,3;UBERON:0004054,7.76e-08,3;UBERON:0001225,1.16e-07,12;UBERON:0008987,1.16e-07,12;UBERON:0003887,1.16e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0.348259474598534,1.32957960518865,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0.402829317109147,0,0.976248230192678,0,0.81014194788176,0.17859945656816,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.170093705276516,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,1.22206028986725,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0.242780379534093,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0.298509605773748,0.233713309847224,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.985123076837112,1.33982065078089,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:61571793..61571795,+ | |||
}} |
Revision as of 14:59, 11 September 2013
Short description: | p@chr17:61571793..61571795, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:61571793..61571795, + |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 4.64e-17 | 5 |
macrophage | 3.71e-14 | 6 |
glomerular cell | 1.78e-12 | 7 |
kidney corpuscule cell | 1.78e-12 | 7 |
mesenchymal stem cell of adipose | 6.61e-11 | 8 |
kidney cortical cell | 1.16e-07 | 12 |
renal cortical epithelial cell | 1.16e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 7.72e-21 | 1 |
spermatic cord | 7.72e-21 | 1 |
primitive nephron | 1.78e-12 | 7 |
renal glomerulus | 1.78e-12 | 7 |
renal corpuscle | 1.78e-12 | 7 |
glomerular capsule | 1.78e-12 | 7 |
metanephric mesenchyme | 1.78e-12 | 7 |
glomerular tuft | 1.78e-12 | 7 |
S-shaped body | 1.78e-12 | 7 |
renal vesicle | 1.78e-12 | 7 |
comma-shaped body | 1.78e-12 | 7 |
mesonephric epithelium | 4.90e-11 | 8 |
mesonephric tubule | 4.90e-11 | 8 |
nephric duct | 4.90e-11 | 8 |
renal duct | 4.90e-11 | 8 |
mesonephric duct | 4.90e-11 | 8 |
pronephric duct | 4.90e-11 | 8 |
duct | 4.30e-10 | 19 |
mesonephros | 6.48e-10 | 9 |
pronephros | 6.48e-10 | 9 |
nephrogenic cord | 6.48e-10 | 9 |
pronephric mesoderm | 6.48e-10 | 9 |
rostral part of nephrogenic cord | 6.48e-10 | 9 |
presumptive pronephric mesoderm | 6.48e-10 | 9 |
urogenital ridge | 2.82e-08 | 11 |
male reproductive organ | 3.76e-08 | 11 |
male genital duct | 7.76e-08 | 3 |
internal male genitalia | 7.76e-08 | 3 |
cortex of kidney | 1.16e-07 | 12 |
renal parenchyma | 1.16e-07 | 12 |
intraembryonic coelom | 1.16e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.