FFCP PHASE1:Hg19::chr17:57906611..57906633,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C17|description=CAGE_peak_at_chr17:57906611..57906633,-|id=chr17:57906611..57906633,-|ontology_enrichment_celltype=CL:0000860!1.71e-19!45;CL:0002057!2.04e-18!42;CL:0000839!7.12e-16!70;CL:0000557!1.65e-15!71;CL:0000766!7.82e-14!76;CL:0002194!2.27e-13!63;CL:0000576!2.27e-13!63;CL:0000040!2.27e-13!63;CL:0000559!2.27e-13!63;CL:0002009!1.07e-12!65;CL:0002031!9.78e-10!124;CL:0000763!6.79e-09!112;CL:0000049!6.79e-09!112;CL:0002087!1.23e-07!119;CL:0000738!2.00e-07!140|ontology_enrichment_celltype_v019=CL:0000860;7.02e-47;33!CL:0002057;7.02e-47;33!CL:0000473;4.40e-32;39!CL:0000234;4.40e-32;39!CL:0000576;2.43e-24;48!CL:0000766;3.10e-15;69!CL:0000763;1.70e-08;100!CL:0002087;2.76e-08;104!CL:0000319;1.31e-07;1|ontology_enrichment_celltype_v019_2=CL:0000860,3.20e-46,42;CL:0002057,3.20e-46,42;CL:0000473,5.37e-40,48;CL:0000234,5.37e-40,48;CL:0000839,1.11e-34,66;CL:0000557,4.10e-34,67;CL:0000766,1.67e-31,72;CL:0002194,2.82e-31,59;CL:0000576,2.82e-31,59;CL:0000040,2.82e-31,59;CL:0000559,2.82e-31,59;CL:0002009,3.77e-30,61;CL:0000763,8.94e-20,108;CL:0000049,8.94e-20,108;CL:0002031,2.11e-19,120;CL:0000738,1.21e-16,136;CL:0000988,2.03e-16,177;CL:0002087,2.97e-16,115;CL:0002032,1.99e-13,161;CL:0000837,1.99e-13,161;CL:0000037,1.07e-12,168;CL:0000319,9.10e-08,1;CL:0000134,2.06e-07,354;CL:0002320,3.59e-07,361|ontology_enrichment_development_v019=CL:0002057;1.72e-32;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060060;1.31e-07;1!DOID:0060061;1.31e-07;1!DOID:3030;1.31e-07;1!DOID:8691;1.31e-07;1|ontology_enrichment_disease_v019_2=DOID:3030,9.10e-08,1;DOID:0060060,1.44e-07,1;DOID:0060061,1.44e-07,1;DOID:8691,1.44e-07,1|ontology_enrichment_uberon=UBERON:0002405!2.00e-14!115;UBERON:0002390!2.12e-14!102;UBERON:0003061!2.12e-14!102;UBERON:0002193!7.09e-14!112;UBERON:0002371!1.12e-13!80;UBERON:0001474!4.99e-12!86;UBERON:0004765!1.69e-09!101;UBERON:0001434!1.69e-09!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.56e-30,98;UBERON:0003061,2.56e-30,98;UBERON:0002371,1.17e-29,76;UBERON:0001474,3.16e-27,82;UBERON:0002193,3.98e-27,108;UBERON:0004765,1.76e-24,90;UBERON:0002405,1.43e-23,93;UBERON:0001434,1.17e-21,100;UBERON:0003081,1.03e-13,203;UBERON:0002204,2.03e-11,167;UBERON:0000926,4.54e-08,315;UBERON:0004120,4.54e-08,315;UBERON:0006603,4.54e-08,315;UBERON:0002384,7.64e-07,371|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,6.61692502340946,4.35473201099471,9.93225365532058,1.03423704220986,1.29096936716765,2.70852973188684,0,0.272906150057846,0.224723484445085,1.83650335422542,2.24650318953266,1.27867425159808,1.64925650093358,1.99463657621632,0.426224750532694,0.290209238628584,1.13477044938228,0,5.02497330513487,4.17186334736161,6.5156653411535,0,4.05105399586321,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.668462741311041,0,0,0,0.896639238079726,2.86130564631732,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,24.6331618947972,0.528290604079356,1.65862492432618,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.329607748453519,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr17:57906611..57906633,- | |||
|id=chr17:57906611..57906633,- | |||
|ontology_enrichment_celltype=CL:0000860!1.71e-19!45;CL:0002057!2.04e-18!42;CL:0000839!7.12e-16!70;CL:0000557!1.65e-15!71;CL:0000766!7.82e-14!76;CL:0002194!2.27e-13!63;CL:0000576!2.27e-13!63;CL:0000040!2.27e-13!63;CL:0000559!2.27e-13!63;CL:0002009!1.07e-12!65;CL:0002031!9.78e-10!124;CL:0000763!6.79e-09!112;CL:0000049!6.79e-09!112;CL:0002087!1.23e-07!119;CL:0000738!2.00e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.02e-47;33!CL:0002057;7.02e-47;33!CL:0000473;4.40e-32;39!CL:0000234;4.40e-32;39!CL:0000576;2.43e-24;48!CL:0000766;3.10e-15;69!CL:0000763;1.70e-08;100!CL:0002087;2.76e-08;104!CL:0000319;1.31e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.20e-46,42;CL:0002057,3.20e-46,42;CL:0000473,5.37e-40,48;CL:0000234,5.37e-40,48;CL:0000839,1.11e-34,66;CL:0000557,4.10e-34,67;CL:0000766,1.67e-31,72;CL:0002194,2.82e-31,59;CL:0000576,2.82e-31,59;CL:0000040,2.82e-31,59;CL:0000559,2.82e-31,59;CL:0002009,3.77e-30,61;CL:0000763,8.94e-20,108;CL:0000049,8.94e-20,108;CL:0002031,2.11e-19,120;CL:0000738,1.21e-16,136;CL:0000988,2.03e-16,177;CL:0002087,2.97e-16,115;CL:0002032,1.99e-13,161;CL:0000837,1.99e-13,161;CL:0000037,1.07e-12,168;CL:0000319,9.10e-08,1;CL:0000134,2.06e-07,354;CL:0002320,3.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.31e-07;1!DOID:0060061;1.31e-07;1!DOID:3030;1.31e-07;1!DOID:8691;1.31e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,9.10e-08,1;DOID:0060060,1.44e-07,1;DOID:0060061,1.44e-07,1;DOID:8691,1.44e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002405!2.00e-14!115;UBERON:0002390!2.12e-14!102;UBERON:0003061!2.12e-14!102;UBERON:0002193!7.09e-14!112;UBERON:0002371!1.12e-13!80;UBERON:0001474!4.99e-12!86;UBERON:0004765!1.69e-09!101;UBERON:0001434!1.69e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.56e-30,98;UBERON:0003061,2.56e-30,98;UBERON:0002371,1.17e-29,76;UBERON:0001474,3.16e-27,82;UBERON:0002193,3.98e-27,108;UBERON:0004765,1.76e-24,90;UBERON:0002405,1.43e-23,93;UBERON:0001434,1.17e-21,100;UBERON:0003081,1.03e-13,203;UBERON:0002204,2.03e-11,167;UBERON:0000926,4.54e-08,315;UBERON:0004120,4.54e-08,315;UBERON:0006603,4.54e-08,315;UBERON:0002384,7.64e-07,371 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,6.61692502340946,4.35473201099471,9.93225365532058,1.03423704220986,1.29096936716765,2.70852973188684,0,0.272906150057846,0.224723484445085,1.83650335422542,2.24650318953266,1.27867425159808,1.64925650093358,1.99463657621632,0.426224750532694,0.290209238628584,1.13477044938228,0,5.02497330513487,4.17186334736161,6.5156653411535,0,4.05105399586321,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.668462741311041,0,0,0,0.896639238079726,2.86130564631732,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,24.6331618947972,0.528290604079356,1.65862492432618,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.329607748453519,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,5.04085918757057,3.83048210734159,4.28129992972367,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0.195984794828755,0,0,0.171986032471617,0,0.219267951258557,0.164230914106418,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0.496166021811951,0,0,0,1.08803560673895,0.7520696820681,5.51422038174231,3.60659893780785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0.537266523244462,0,0.219284049578707,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0.327609848846413,1.96618327002975,0,1.19992437512958,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0.857440047187092,0.0679697329768317,0,0.354581522651905,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,2.52017555398455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0.128915775947154,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:57906611..57906633,- | |||
}} |
Revision as of 14:52, 11 September 2013
Short description: | p@chr17:57906611..57906633, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:57906611..57906633, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.20e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.20e-46 | 42 |
defensive cell | 5.37e-40 | 48 |
phagocyte | 5.37e-40 | 48 |
myeloid lineage restricted progenitor cell | 1.11e-34 | 66 |
granulocyte monocyte progenitor cell | 4.10e-34 | 67 |
myeloid leukocyte | 1.67e-31 | 72 |
monopoietic cell | 2.82e-31 | 59 |
monocyte | 2.82e-31 | 59 |
monoblast | 2.82e-31 | 59 |
promonocyte | 2.82e-31 | 59 |
macrophage dendritic cell progenitor | 3.77e-30 | 61 |
myeloid cell | 8.94e-20 | 108 |
common myeloid progenitor | 8.94e-20 | 108 |
hematopoietic lineage restricted progenitor cell | 2.11e-19 | 120 |
leukocyte | 1.21e-16 | 136 |
hematopoietic cell | 2.03e-16 | 177 |
nongranular leukocyte | 2.97e-16 | 115 |
hematopoietic oligopotent progenitor cell | 1.99e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-13 | 161 |
hematopoietic stem cell | 1.07e-12 | 168 |
mucus secreting cell | 9.10e-08 | 1 |
mesenchymal cell | 2.06e-07 | 354 |
connective tissue cell | 3.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.56e-30 | 98 |
blood island | 2.56e-30 | 98 |
bone marrow | 1.17e-29 | 76 |
bone element | 3.16e-27 | 82 |
hemolymphoid system | 3.98e-27 | 108 |
skeletal element | 1.76e-24 | 90 |
immune system | 1.43e-23 | 93 |
skeletal system | 1.17e-21 | 100 |
lateral plate mesoderm | 1.03e-13 | 203 |
musculoskeletal system | 2.03e-11 | 167 |
mesoderm | 4.54e-08 | 315 |
mesoderm-derived structure | 4.54e-08 | 315 |
presumptive mesoderm | 4.54e-08 | 315 |
connective tissue | 7.64e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 9.10e-08 | 1 |
non-Hodgkin lymphoma | 1.44e-07 | 1 |
cutaneous T cell lymphoma | 1.44e-07 | 1 |
mycosis fungoides | 1.44e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.