FFCP PHASE1:Hg19::chr17:39978503..39978516,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=60681|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=18169|TSSclassifier=W|UniProt=|association_with_transcript=-240bp_to_AK000690,AK074413_5end|description=CAGE_peak_16_at_FKBP10_5end|id=chr17:39978503..39978516,+|ontology_enrichment_celltype=CL:0000055!3.75e-26!180;CL:0000183!9.02e-17!59;CL:0000680!1.09e-15!57;CL:0000056!1.09e-15!57;CL:0000355!1.09e-15!57;CL:0000057!9.00e-15!75;CL:0000187!1.79e-14!54;CL:0000548!1.48e-13!679;CL:0000004!1.48e-13!679;CL:0000255!1.48e-13!679;CL:0000012!4.17e-13!682;CL:0000393!5.95e-13!60;CL:0000211!5.95e-13!60;CL:0000222!1.03e-12!119;CL:0000192!1.09e-12!42;CL:0000514!1.09e-12!42;CL:0000144!1.57e-11!625;CL:0002371!2.54e-11!591;CL:0000359!4.05e-11!32;CL:0002321!3.67e-09!248;CL:0000220!6.73e-09!246;CL:0000003!5.69e-08!722;CL:0000048!1.16e-07!430;CL:0002620!3.23e-07!23;CL:0000034!3.51e-07!444;CL:0000723!3.54e-07!436|ontology_enrichment_celltype_v019=CL:0000359;1.74e-10;32!CL:0002595;7.21e-09;5!CL:0000192;7.22e-08;43!CL:0002570;1.44e-07;8!CL:0000723;1.63e-07;61!CL:0000048;5.28e-07;58!CL:0000134;8.24e-07;55!CL:0002548;8.52e-07;6|ontology_enrichment_celltype_v019_2=CL:0000359,6.36e-11,32;CL:0000048,1.14e-10,427;CL:0000723,2.62e-10,433;CL:0000192,3.23e-10,43;CL:0000514,3.23e-10,43;CL:0000034,7.69e-10,441;CL:0002595,2.56e-09,5;CL:0000187,2.34e-08,55;CL:0000680,9.93e-08,58;CL:0000056,9.93e-08,58;CL:0000355,9.93e-08,58;CL:0002570,1.69e-07,8;CL:0000393,3.62e-07,61;CL:0000211,3.62e-07,61|ontology_enrichment_development_v019=CL:0000514;7.22e-08;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.48e-08;3!DOID:127;1.48e-08;3|ontology_enrichment_disease_v019_2=DOID:0060084,1.01e-08,3;DOID:127,1.01e-08,3|ontology_enrichment_uberon=UBERON:0000914!2.24e-14!83;UBERON:0002329!2.24e-14!83;UBERON:0003077!2.24e-14!83;UBERON:0003059!2.24e-14!83;UBERON:0007282!2.24e-14!83;UBERON:0009618!2.24e-14!83;UBERON:0007285!2.24e-14!83;UBERON:0004290!4.90e-14!70;UBERON:0002385!8.71e-14!63;UBERON:0001015!8.71e-14!63;UBERON:0000383!8.71e-14!63;UBERON:0001134!1.54e-13!61;UBERON:0002036!1.54e-13!61;UBERON:0003082!1.54e-13!61;UBERON:0005256!5.69e-12!143;UBERON:0001637!1.53e-11!42;UBERON:0003509!1.53e-11!42;UBERON:0004572!1.53e-11!42;UBERON:0000486!1.63e-11!82;UBERON:0002049!7.33e-11!79;UBERON:0007798!7.33e-11!79;UBERON:0004872!8.11e-11!84;UBERON:0000490!7.48e-10!138;UBERON:0001981!1.12e-09!60;UBERON:0007500!1.12e-09!60;UBERON:0004537!1.12e-09!60;UBERON:0006965!1.12e-09!60;UBERON:0004573!1.49e-09!33;UBERON:0004571!1.49e-09!33;UBERON:0002100!2.20e-09!216;UBERON:0003914!2.34e-09!118;UBERON:0004535!4.65e-09!110;UBERON:0000055!1.34e-08!69;UBERON:0001009!2.48e-08!113;UBERON:0003104!1.27e-07!238;UBERON:0009142!1.27e-07!238;UBERON:0000119!2.47e-07!312;UBERON:0000475!2.91e-07!365;UBERON:0002199!3.94e-07!45;UBERON:0002416!3.94e-07!45;UBERON:0000481!4.60e-07!347;UBERON:0000483!6.97e-07!309;UBERON:0003102!8.13e-07!95|ontology_enrichment_uberon_v019=UBERON:0003834;7.21e-09;5!UBERON:0001533;7.21e-09;5!UBERON:0004573;1.84e-08;33!UBERON:0004571;1.84e-08;33!UBERON:0001013;3.67e-08;14|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.56e-09,5;UBERON:0001533,2.56e-09,5;UBERON:0004573,4.87e-09,33;UBERON:0004571,4.87e-09,33;UBERON:0001637,5.01e-09,42;UBERON:0003509,5.01e-09,42;UBERON:0004572,5.01e-09,42;UBERON:0001013,3.90e-08,14;UBERON:0004872,3.99e-08,83;UBERON:0007503,2.56e-07,78;UBERON:0007524,3.31e-07,73;UBERON:0003914,4.20e-07,117;UBERON:0001134,5.42e-07,62;UBERON:0002036,5.42e-07,62;UBERON:0003082,5.42e-07,62|phase1_expression=0.181678379270557,1.2846031433459,0.704772020479856,2.00146596706261,0.893922188854576,3.48935409640147,2.53299878168311,0.631719873426831,0,0,0.697801167972428,0.436882744260345,0,0.74259811776028,0.994192127183747,1.34465029290355,1.20538905604795,2.19093027116212,0,0.123121058076788,0.204000691244253,0.626909442956176,0.286235987131057,0.958120975510189,0.251085279189606,0,0,0,0,0,0.154816123316076,1.83884244895785,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,2.02785126545153,0.795285947051099,0.486634870302636,0.283604451492204,1.33037638477538,0.43917392846563,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0.732186172644509,0,0,0.267899184852239,0,0,0,0,0.549605231791222,0,0,0,0.496971951695318,0.506522046658319,0.529636723252875,2.29469296599051,0.709336764396714,1.68203280042692,1.06748995729705,1.48000529050296,0,1.21239604862719,0.326923806226917,0.756787138224657,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0.352303495931295,0,0.140450806702248,0.61246251376468,0.245668634623536,0.516628905878827,0,1.48360157567134,0,1.43723628363248,0,1.00094815897571,0,0,1.5324389789951,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=60681 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18169 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-240bp_to_AK000690,AK074413_5end | |||
|description=CAGE_peak_16_at_FKBP10_5end | |||
|id=chr17:39978503..39978516,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.75e-26!180;CL:0000183!9.02e-17!59;CL:0000680!1.09e-15!57;CL:0000056!1.09e-15!57;CL:0000355!1.09e-15!57;CL:0000057!9.00e-15!75;CL:0000187!1.79e-14!54;CL:0000548!1.48e-13!679;CL:0000004!1.48e-13!679;CL:0000255!1.48e-13!679;CL:0000012!4.17e-13!682;CL:0000393!5.95e-13!60;CL:0000211!5.95e-13!60;CL:0000222!1.03e-12!119;CL:0000192!1.09e-12!42;CL:0000514!1.09e-12!42;CL:0000144!1.57e-11!625;CL:0002371!2.54e-11!591;CL:0000359!4.05e-11!32;CL:0002321!3.67e-09!248;CL:0000220!6.73e-09!246;CL:0000003!5.69e-08!722;CL:0000048!1.16e-07!430;CL:0002620!3.23e-07!23;CL:0000034!3.51e-07!444;CL:0000723!3.54e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.74e-10;32!CL:0002595;7.21e-09;5!CL:0000192;7.22e-08;43!CL:0002570;1.44e-07;8!CL:0000723;1.63e-07;61!CL:0000048;5.28e-07;58!CL:0000134;8.24e-07;55!CL:0002548;8.52e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.36e-11,32;CL:0000048,1.14e-10,427;CL:0000723,2.62e-10,433;CL:0000192,3.23e-10,43;CL:0000514,3.23e-10,43;CL:0000034,7.69e-10,441;CL:0002595,2.56e-09,5;CL:0000187,2.34e-08,55;CL:0000680,9.93e-08,58;CL:0000056,9.93e-08,58;CL:0000355,9.93e-08,58;CL:0002570,1.69e-07,8;CL:0000393,3.62e-07,61;CL:0000211,3.62e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;7.22e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.48e-08;3!DOID:127;1.48e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.01e-08,3;DOID:127,1.01e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.24e-14!83;UBERON:0002329!2.24e-14!83;UBERON:0003077!2.24e-14!83;UBERON:0003059!2.24e-14!83;UBERON:0007282!2.24e-14!83;UBERON:0009618!2.24e-14!83;UBERON:0007285!2.24e-14!83;UBERON:0004290!4.90e-14!70;UBERON:0002385!8.71e-14!63;UBERON:0001015!8.71e-14!63;UBERON:0000383!8.71e-14!63;UBERON:0001134!1.54e-13!61;UBERON:0002036!1.54e-13!61;UBERON:0003082!1.54e-13!61;UBERON:0005256!5.69e-12!143;UBERON:0001637!1.53e-11!42;UBERON:0003509!1.53e-11!42;UBERON:0004572!1.53e-11!42;UBERON:0000486!1.63e-11!82;UBERON:0002049!7.33e-11!79;UBERON:0007798!7.33e-11!79;UBERON:0004872!8.11e-11!84;UBERON:0000490!7.48e-10!138;UBERON:0001981!1.12e-09!60;UBERON:0007500!1.12e-09!60;UBERON:0004537!1.12e-09!60;UBERON:0006965!1.12e-09!60;UBERON:0004573!1.49e-09!33;UBERON:0004571!1.49e-09!33;UBERON:0002100!2.20e-09!216;UBERON:0003914!2.34e-09!118;UBERON:0004535!4.65e-09!110;UBERON:0000055!1.34e-08!69;UBERON:0001009!2.48e-08!113;UBERON:0003104!1.27e-07!238;UBERON:0009142!1.27e-07!238;UBERON:0000119!2.47e-07!312;UBERON:0000475!2.91e-07!365;UBERON:0002199!3.94e-07!45;UBERON:0002416!3.94e-07!45;UBERON:0000481!4.60e-07!347;UBERON:0000483!6.97e-07!309;UBERON:0003102!8.13e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;7.21e-09;5!UBERON:0001533;7.21e-09;5!UBERON:0004573;1.84e-08;33!UBERON:0004571;1.84e-08;33!UBERON:0001013;3.67e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.56e-09,5;UBERON:0001533,2.56e-09,5;UBERON:0004573,4.87e-09,33;UBERON:0004571,4.87e-09,33;UBERON:0001637,5.01e-09,42;UBERON:0003509,5.01e-09,42;UBERON:0004572,5.01e-09,42;UBERON:0001013,3.90e-08,14;UBERON:0004872,3.99e-08,83;UBERON:0007503,2.56e-07,78;UBERON:0007524,3.31e-07,73;UBERON:0003914,4.20e-07,117;UBERON:0001134,5.42e-07,62;UBERON:0002036,5.42e-07,62;UBERON:0003082,5.42e-07,62 | |||
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| |||
|short_description=p16@FKBP10 | |||
}} |
Revision as of 13:39, 11 September 2013
Short description: | p16@FKBP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_FKBP10_5end |
Coexpression cluster: | NA |
Association with transcript: | -240bp_to_AK000690, AK074413_5end |
EntrezGene: | FKBP10 |
HGNC: | 18169 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.36e-11 | 32 |
multi fate stem cell | 1.14e-10 | 427 |
somatic stem cell | 2.62e-10 | 433 |
smooth muscle cell | 3.23e-10 | 43 |
smooth muscle myoblast | 3.23e-10 | 43 |
stem cell | 7.69e-10 | 441 |
smooth muscle cell of the subclavian artery | 2.56e-09 | 5 |
muscle cell | 2.34e-08 | 55 |
muscle precursor cell | 9.93e-08 | 58 |
myoblast | 9.93e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.93e-08 | 58 |
mesenchymal stem cell of adipose | 1.69e-07 | 8 |
electrically responsive cell | 3.62e-07 | 61 |
electrically active cell | 3.62e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 2.56e-09 | 5 |
subclavian artery | 2.56e-09 | 5 |
systemic artery | 4.87e-09 | 33 |
systemic arterial system | 4.87e-09 | 33 |
artery | 5.01e-09 | 42 |
arterial blood vessel | 5.01e-09 | 42 |
arterial system | 5.01e-09 | 42 |
adipose tissue | 3.90e-08 | 14 |
splanchnic layer of lateral plate mesoderm | 3.99e-08 | 83 |
epithelial vesicle | 2.56e-07 | 78 |
dense mesenchyme tissue | 3.31e-07 | 73 |
epithelial tube | 4.20e-07 | 117 |
skeletal muscle tissue | 5.42e-07 | 62 |
striated muscle tissue | 5.42e-07 | 62 |
myotome | 5.42e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.01e-08 | 3 |
leiomyoma | 1.01e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.