FFCP PHASE1:Hg19::chr17:37309212..37309229,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57125|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20945|TSSclassifier=S|UniProt=B3KSI0|association_with_transcript=255bp_to_ENST00000461225,ENST00000539608,uc002hrj.1,uc002hrk.1_5end|description=CAGE_peak_2_at_PLXDC1_5end|id=chr17:37309212..37309229,-|ontology_enrichment_celltype=CL:0000791!8.77e-15!18;CL:0000789!8.77e-15!18;CL:0002420!8.77e-15!18;CL:0002419!8.77e-15!18;CL:0000790!8.77e-15!18;CL:0000625!1.53e-12!11;CL:0000084!1.22e-11!25;CL:0000827!1.22e-11!25|ontology_enrichment_celltype_v019=CL:0000791;3.84e-39;18!CL:0000789;3.84e-39;18!CL:0002419;3.84e-39;18!CL:0000084;9.63e-31;25!CL:0000625;1.54e-29;11!CL:0000624;7.85e-14;6!CL:0000542;2.46e-10;53!CL:0000623;4.12e-10;3!CL:0000226;5.47e-10;3!CL:0000842;5.47e-10;3|ontology_enrichment_celltype_v019_2=CL:0000791,3.57e-39,18;CL:0000789,3.57e-39,18;CL:0002420,3.57e-39,18;CL:0002419,3.57e-39,18;CL:0000790,3.57e-39,18;CL:0000084,1.21e-30,25;CL:0000827,1.21e-30,25;CL:0000625,1.47e-29,11;CL:0000838,2.43e-18,52;CL:0000542,6.69e-18,53;CL:0000051,6.69e-18,53;CL:0000624,7.60e-14,6;CL:0000623,1.99e-10,3;CL:0000825,1.99e-10,3;CL:0000226,3.76e-10,3;CL:0000842,3.76e-10,3;CL:0002087,3.29e-08,115|ontology_enrichment_development_v019=CL:0000790;3.84e-39;18!CL:0000051;2.46e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.54e-37!115;UBERON:0001049!2.41e-15!57;UBERON:0005068!2.41e-15!57;UBERON:0006241!2.41e-15!57;UBERON:0007135!2.41e-15!57;UBERON:0001017!4.23e-15!82;UBERON:0000955!5.34e-15!69;UBERON:0006238!5.34e-15!69;UBERON:0005743!1.17e-14!86;UBERON:0002780!1.70e-14!41;UBERON:0001890!1.70e-14!41;UBERON:0006240!1.70e-14!41;UBERON:0003080!6.66e-14!42;UBERON:0000073!4.91e-13!94;UBERON:0001016!4.91e-13!94;UBERON:0002616!1.21e-12!59;UBERON:0001893!1.63e-12!34;UBERON:0002020!2.78e-12!34;UBERON:0003528!2.78e-12!34;UBERON:0002346!3.27e-12!90;UBERON:0003075!3.79e-12!86;UBERON:0007284!3.79e-12!86;UBERON:0002791!8.29e-12!33;UBERON:0001869!1.94e-11!32;UBERON:0001950!1.54e-10!20;UBERON:0002619!1.98e-10!22;UBERON:0003056!2.19e-09!61;UBERON:0000153!4.81e-09!129;UBERON:0007811!4.81e-09!129;UBERON:0000956!1.58e-08!25;UBERON:0000203!1.58e-08!25;UBERON:0000033!3.69e-07!123|ontology_enrichment_uberon_v019=UBERON:0001950;1.91e-12;20!UBERON:0002619;3.39e-11;22!UBERON:0000956;1.10e-09;25!UBERON:0000203;1.10e-09;25!UBERON:0001905;2.49e-08;2!UBERON:0002757;2.49e-08;2!UBERON:0010134;2.49e-08;2!UBERON:0005408;2.49e-08;2!UBERON:0001899;2.49e-08;2!UBERON:0000200;2.91e-08;6!UBERON:0002370;6.93e-08;2!UBERON:0005058;6.93e-08;2!UBERON:0009113;6.93e-08;2!UBERON:0001869;1.03e-07;32!UBERON:0001893;2.91e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.82e-12,20;UBERON:0002619,6.34e-11,22;UBERON:0000956,1.90e-09,25;UBERON:0000203,1.90e-09,25;UBERON:0002780,2.43e-09,41;UBERON:0001890,2.43e-09,41;UBERON:0003080,2.43e-09,41;UBERON:0006240,2.43e-09,41;UBERON:0000955,1.18e-08,68;UBERON:0006238,1.18e-08,68;UBERON:0007023,1.36e-08,114;UBERON:0001869,1.47e-08,32;UBERON:0002370,2.45e-08,4;UBERON:0005058,2.45e-08,4;UBERON:0009113,2.45e-08,4;UBERON:0003295,2.45e-08,4;UBERON:0005562,2.45e-08,4;UBERON:0001905,2.46e-08,2;UBERON:0002757,2.46e-08,2;UBERON:0010134,2.46e-08,2;UBERON:0005408,2.46e-08,2;UBERON:0001899,2.46e-08,2;UBERON:0000200,4.34e-08,6;UBERON:0001893,5.96e-08,34;UBERON:0003056,1.06e-07,61;UBERON:0002791,4.63e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.868043482863407,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,4.72103448273199,1.57204305099666,3.70082698199117,0,2.28145586643513,1.89379122293893,0,0,0,0,0.270803863765016,0,0,0,0.276350017785848,0,6.07974908964448,3.74557159325598,8.36284190439814,0.226618685395132,3.44898444241729,2.06176467289578,2.02415753615602,5.41561204350964,2.60433381542567,4.75226022224187,0.752875595388864,1.4078527226986,4.99722906209383,7.81364931745256,5.74789597844733,2.21767417547206,5.88368430723716,4.48955652036677,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.94064817373566,3.20857590699371,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,1.6541442089831,1.72571360654893,2.027823598265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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20945 | |||
|TSSclassifier=S | |||
|UniProt=B3KSI0 | |||
|association_with_transcript=255bp_to_ENST00000461225,ENST00000539608,uc002hrj.1,uc002hrk.1_5end | |||
|description=CAGE_peak_2_at_PLXDC1_5end | |||
|id=chr17:37309212..37309229,- | |||
|ontology_enrichment_celltype=CL:0000791!8.77e-15!18;CL:0000789!8.77e-15!18;CL:0002420!8.77e-15!18;CL:0002419!8.77e-15!18;CL:0000790!8.77e-15!18;CL:0000625!1.53e-12!11;CL:0000084!1.22e-11!25;CL:0000827!1.22e-11!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.84e-39;18!CL:0000789;3.84e-39;18!CL:0002419;3.84e-39;18!CL:0000084;9.63e-31;25!CL:0000625;1.54e-29;11!CL:0000624;7.85e-14;6!CL:0000542;2.46e-10;53!CL:0000623;4.12e-10;3!CL:0000226;5.47e-10;3!CL:0000842;5.47e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.57e-39,18;CL:0000789,3.57e-39,18;CL:0002420,3.57e-39,18;CL:0002419,3.57e-39,18;CL:0000790,3.57e-39,18;CL:0000084,1.21e-30,25;CL:0000827,1.21e-30,25;CL:0000625,1.47e-29,11;CL:0000838,2.43e-18,52;CL:0000542,6.69e-18,53;CL:0000051,6.69e-18,53;CL:0000624,7.60e-14,6;CL:0000623,1.99e-10,3;CL:0000825,1.99e-10,3;CL:0000226,3.76e-10,3;CL:0000842,3.76e-10,3;CL:0002087,3.29e-08,115 | |||
|ontology_enrichment_development_v019=CL:0000790;3.84e-39;18!CL:0000051;2.46e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-37!115;UBERON:0001049!2.41e-15!57;UBERON:0005068!2.41e-15!57;UBERON:0006241!2.41e-15!57;UBERON:0007135!2.41e-15!57;UBERON:0001017!4.23e-15!82;UBERON:0000955!5.34e-15!69;UBERON:0006238!5.34e-15!69;UBERON:0005743!1.17e-14!86;UBERON:0002780!1.70e-14!41;UBERON:0001890!1.70e-14!41;UBERON:0006240!1.70e-14!41;UBERON:0003080!6.66e-14!42;UBERON:0000073!4.91e-13!94;UBERON:0001016!4.91e-13!94;UBERON:0002616!1.21e-12!59;UBERON:0001893!1.63e-12!34;UBERON:0002020!2.78e-12!34;UBERON:0003528!2.78e-12!34;UBERON:0002346!3.27e-12!90;UBERON:0003075!3.79e-12!86;UBERON:0007284!3.79e-12!86;UBERON:0002791!8.29e-12!33;UBERON:0001869!1.94e-11!32;UBERON:0001950!1.54e-10!20;UBERON:0002619!1.98e-10!22;UBERON:0003056!2.19e-09!61;UBERON:0000153!4.81e-09!129;UBERON:0007811!4.81e-09!129;UBERON:0000956!1.58e-08!25;UBERON:0000203!1.58e-08!25;UBERON:0000033!3.69e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.91e-12;20!UBERON:0002619;3.39e-11;22!UBERON:0000956;1.10e-09;25!UBERON:0000203;1.10e-09;25!UBERON:0001905;2.49e-08;2!UBERON:0002757;2.49e-08;2!UBERON:0010134;2.49e-08;2!UBERON:0005408;2.49e-08;2!UBERON:0001899;2.49e-08;2!UBERON:0000200;2.91e-08;6!UBERON:0002370;6.93e-08;2!UBERON:0005058;6.93e-08;2!UBERON:0009113;6.93e-08;2!UBERON:0001869;1.03e-07;32!UBERON:0001893;2.91e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.82e-12,20;UBERON:0002619,6.34e-11,22;UBERON:0000956,1.90e-09,25;UBERON:0000203,1.90e-09,25;UBERON:0002780,2.43e-09,41;UBERON:0001890,2.43e-09,41;UBERON:0003080,2.43e-09,41;UBERON:0006240,2.43e-09,41;UBERON:0000955,1.18e-08,68;UBERON:0006238,1.18e-08,68;UBERON:0007023,1.36e-08,114;UBERON:0001869,1.47e-08,32;UBERON:0002370,2.45e-08,4;UBERON:0005058,2.45e-08,4;UBERON:0009113,2.45e-08,4;UBERON:0003295,2.45e-08,4;UBERON:0005562,2.45e-08,4;UBERON:0001905,2.46e-08,2;UBERON:0002757,2.46e-08,2;UBERON:0010134,2.46e-08,2;UBERON:0005408,2.46e-08,2;UBERON:0001899,2.46e-08,2;UBERON:0000200,4.34e-08,6;UBERON:0001893,5.96e-08,34;UBERON:0003056,1.06e-07,61;UBERON:0002791,4.63e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.868043482863407,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,4.72103448273199,1.57204305099666,3.70082698199117,0,2.28145586643513,1.89379122293893,0,0,0,0,0.270803863765016,0,0,0,0.276350017785848,0,6.07974908964448,3.74557159325598,8.36284190439814,0.226618685395132,3.44898444241729,2.06176467289578,2.02415753615602,5.41561204350964,2.60433381542567,4.75226022224187,0.752875595388864,1.4078527226986,4.99722906209383,7.81364931745256,5.74789597844733,2.21767417547206,5.88368430723716,4.48955652036677,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.94064817373566,3.20857590699371,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,1.6541442089831,1.72571360654893,2.02782359826544,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0,0,0.844430541190656,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.952927101831156,0.822724546172388,0.648473311192717,1.62009431171434,3.17250070517708,0,0,0,0,0,0.924843963529383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0.211125408127993,0.996239941255349,1.38141957765574,0,0,0,0,0,0.537063524026827,0,0.493217028184668,0,0,2.90799823828566,0.463840490809256,1.99613798001194,0,0,0,0,0.254253650292766,0.472775363535873,0.689486746482929,0,0,0.885741385813839,0.844175070377856,0,0.663475559587348,0.591095237907095,0.658156191461918,0,0.278847488557207,0.230850775511391,0,0.23056390438806,0,0.108647371922008,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0.796118080530053,1.22206028986725,0,0,0,0.539209063845416,0,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0,0.568679216656392,0.300646838828985,0.414752765588989,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0.195984794828755,0.0870592065804026,0.34945333648406,0.343972064943233,0,0,0,0.387956065953678,0,1.80784592624426,0,0.19871461170299,1.01297273529406,0,0.0801588202515337,1.28071796843612,0.19980960958213,0.288180834308212,0,0,0,0,0.235694034616795,0.135904206073614,0.523014231561666,0,0,0,0.273810757783986,0,0,0,1.67569440763353,0.687481272035051,0.717873024576814,0.399358000997982,0.429226048136571,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0.169346664131569,0,0.681017030557878,0,0,0.415440338029185,0,0.77380195455795,0.668245123238271,2.0126081255956,0.0788057072991982,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0.517131825446202,0.39669780522807,0,0,0.961086713109252,0,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0.886068179966986,0.732157589411779,1.251909307065,0,0.887432412294818,0.124192805882767,1.52183498429854,0,0.151649117541648,0.856396000634902,0.705797459094515,0,0,0,0,0,0,0.251567901752575,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,3.78554694685953,0,0,0,0,0.231522474323834,0,0.358177682162975,0,0.438568099157414,0,0,0,0,0,0,1.38258436151731,0.389720617678777,0.531459361253452,0.163565394255844,0,0,0.633936370075881,0,0,0,0,0.184105950251841,0,0,0,0.215649622793364,0,0,0.33946505990805,0.212574920101683,0,0,0.318004350653419,0,0,0,0.3062454773532,0.899209151350433,0,1.11743701340006,1.43581454968528,0.252071696221718,1.03735878696327,0.322951291263702,0,0.588886311006154,0.235939446695481,0,0,0,0,1.19349733269765,0.601682626794058,0,0,0,0,0,1.01306376927592,0,1.86018116851066,0.697573912132975,0,0,1.48863353516788,0,0,8.57122937405259,12.1062139998777,0,0.227662191351298,0.0887023701626388,0,0,0.815636795721981,1.57854656550838,0,0,0.706437835654626,0.314231179832004,0,0,0,0,2.57315559035963,3.95034029331817,0.116241425368125,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0.237840181555137,0,0.87952413396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| |||
|short_description=p2@PLXDC1 | |||
}} |
Revision as of 13:16, 11 September 2013
Short description: | p2@PLXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PLXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 255bp_to_ENST00000461225, ENST00000539608, uc002hrj.1, uc002hrk.1_5end |
EntrezGene: | PLXDC1 |
HGNC: | 20945 |
UniProt: | B3KSI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.57e-39 | 18 |
alpha-beta T cell | 3.57e-39 | 18 |
immature T cell | 3.57e-39 | 18 |
mature T cell | 3.57e-39 | 18 |
immature alpha-beta T cell | 3.57e-39 | 18 |
T cell | 1.21e-30 | 25 |
pro-T cell | 1.21e-30 | 25 |
CD8-positive, alpha-beta T cell | 1.47e-29 | 11 |
lymphoid lineage restricted progenitor cell | 2.43e-18 | 52 |
lymphocyte | 6.69e-18 | 53 |
common lymphoid progenitor | 6.69e-18 | 53 |
CD4-positive, alpha-beta T cell | 7.60e-14 | 6 |
natural killer cell | 1.99e-10 | 3 |
pro-NK cell | 1.99e-10 | 3 |
single nucleate cell | 3.76e-10 | 3 |
mononuclear cell | 3.76e-10 | 3 |
nongranular leukocyte | 3.29e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.82e-12 | 20 |
regional part of cerebral cortex | 6.34e-11 | 22 |
cerebral cortex | 1.90e-09 | 25 |
pallium | 1.90e-09 | 25 |
regional part of forebrain | 2.43e-09 | 41 |
forebrain | 2.43e-09 | 41 |
anterior neural tube | 2.43e-09 | 41 |
future forebrain | 2.43e-09 | 41 |
brain | 1.18e-08 | 68 |
future brain | 1.18e-08 | 68 |
adult organism | 1.36e-08 | 114 |
cerebral hemisphere | 1.47e-08 | 32 |
thymus | 2.45e-08 | 4 |
hemolymphoid system gland | 2.45e-08 | 4 |
thymic region | 2.45e-08 | 4 |
pharyngeal gland | 2.45e-08 | 4 |
thymus primordium | 2.45e-08 | 4 |
pineal body | 2.46e-08 | 2 |
regional part of epithalamus | 2.46e-08 | 2 |
secretory circumventricular organ | 2.46e-08 | 2 |
circumventricular organ | 2.46e-08 | 2 |
epithalamus | 2.46e-08 | 2 |
gyrus | 4.34e-08 | 6 |
telencephalon | 5.96e-08 | 34 |
pre-chordal neural plate | 1.06e-07 | 61 |
regional part of telencephalon | 4.63e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.