FFCP PHASE1:Hg19::chr17:31107844..31107872,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4642|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=7598|TSSclassifier=N|UniProt=F2Z2U7|association_with_transcript=-213bp_to_ENST00000394649_5end|coexpression_cluster_id=C161|description=CAGE_peak_5_at_MYO1D_5end|id=chr17:31107844..31107872,-|ontology_enrichment_celltype=CL:0002590!3.64e-16!3;CL:0000222!2.22e-08!119;CL:0000680!2.83e-08!57;CL:0000056!2.83e-08!57;CL:0000355!2.83e-08!57;CL:0000183!6.58e-08!59;CL:0000393!1.05e-07!60;CL:0000211!1.05e-07!60;CL:0002580!2.50e-07!3;CL:0000187!3.11e-07!54;CL:0002504!3.34e-07!3;CL:1000279!3.34e-07!3;CL:1000280!3.34e-07!3|ontology_enrichment_celltype_v019=CL:0000077;5.42e-19;19!CL:0002097;1.48e-12;2!CL:0002262;3.06e-12;2!CL:1000398;3.06e-12;2!CL:0000174;8.31e-09;3!CL:0002590;9.31e-09;3!CL:0000213;4.50e-08;58!CL:0000215;4.50e-08;58|ontology_enrichment_celltype_v019_2=CL:0000077,5.29e-19,19;CL:0002097,1.48e-12,2;CL:0002262,3.62e-12,2;CL:1000398,3.62e-12,2;CL:0000213,1.12e-09,58;CL:0000215,1.12e-09,58;CL:0000174,8.31e-09,3;CL:0000222,8.60e-09,121;CL:0002590,9.66e-09,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:4231!6.42e-11!2;DOID:1907!6.42e-11!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005284!6.90e-10!5;UBERON:0001134!1.34e-07!61;UBERON:0002036!1.34e-07!61;UBERON:0003082!1.34e-07!61;UBERON:0002385!2.71e-07!63;UBERON:0001015!2.71e-07!63;UBERON:0000383!2.71e-07!63|ontology_enrichment_uberon_v019=UBERON:0007195;1.49e-23;1!UBERON:0003513;1.91e-13;7!UBERON:0001281;3.06e-12;2!UBERON:0003497;3.06e-12;2!UBERON:0003909;3.06e-12;2!UBERON:0003835;3.06e-12;2!UBERON:0002369;8.31e-09;3!UBERON:0001235;8.31e-09;3!UBERON:0006858;8.31e-09;3!UBERON:0001280;1.35e-08;3!UBERON:0004647;1.35e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.34e-23,1;UBERON:0003513,1.91e-13,7;UBERON:0001281,3.62e-12,2;UBERON:0003497,3.62e-12,2;UBERON:0003909,3.62e-12,2;UBERON:0003835,3.62e-12,2;UBERON:0002369,8.31e-09,3;UBERON:0001235,8.31e-09,3;UBERON:0006858,8.31e-09,3;UBERON:0001280,1.51e-08,3;UBERON:0004647,1.51e-08,3;UBERON:0005171,1.51e-08,3|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82303003295338,1.74306691720059,3.499054691372,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,5.37845022021834,0.762520775695299,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,1.75380354101505,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52322084867518,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0,55.9692553488556,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@MYO1D}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4642 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7598 | |||
|TSSclassifier=N | |||
|UniProt=F2Z2U7 | |||
|association_with_transcript=-213bp_to_ENST00000394649_5end | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_5_at_MYO1D_5end | |||
|id=chr17:31107844..31107872,- | |||
|ontology_enrichment_celltype=CL:0002590!3.64e-16!3;CL:0000222!2.22e-08!119;CL:0000680!2.83e-08!57;CL:0000056!2.83e-08!57;CL:0000355!2.83e-08!57;CL:0000183!6.58e-08!59;CL:0000393!1.05e-07!60;CL:0000211!1.05e-07!60;CL:0002580!2.50e-07!3;CL:0000187!3.11e-07!54;CL:0002504!3.34e-07!3;CL:1000279!3.34e-07!3;CL:1000280!3.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.42e-19;19!CL:0002097;1.48e-12;2!CL:0002262;3.06e-12;2!CL:1000398;3.06e-12;2!CL:0000174;8.31e-09;3!CL:0002590;9.31e-09;3!CL:0000213;4.50e-08;58!CL:0000215;4.50e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.29e-19,19;CL:0002097,1.48e-12,2;CL:0002262,3.62e-12,2;CL:1000398,3.62e-12,2;CL:0000213,1.12e-09,58;CL:0000215,1.12e-09,58;CL:0000174,8.31e-09,3;CL:0000222,8.60e-09,121;CL:0002590,9.66e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4231!6.42e-11!2;DOID:1907!6.42e-11!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005284!6.90e-10!5;UBERON:0001134!1.34e-07!61;UBERON:0002036!1.34e-07!61;UBERON:0003082!1.34e-07!61;UBERON:0002385!2.71e-07!63;UBERON:0001015!2.71e-07!63;UBERON:0000383!2.71e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.49e-23;1!UBERON:0003513;1.91e-13;7!UBERON:0001281;3.06e-12;2!UBERON:0003497;3.06e-12;2!UBERON:0003909;3.06e-12;2!UBERON:0003835;3.06e-12;2!UBERON:0002369;8.31e-09;3!UBERON:0001235;8.31e-09;3!UBERON:0006858;8.31e-09;3!UBERON:0001280;1.35e-08;3!UBERON:0004647;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.34e-23,1;UBERON:0003513,1.91e-13,7;UBERON:0001281,3.62e-12,2;UBERON:0003497,3.62e-12,2;UBERON:0003909,3.62e-12,2;UBERON:0003835,3.62e-12,2;UBERON:0002369,8.31e-09,3;UBERON:0001235,8.31e-09,3;UBERON:0006858,8.31e-09,3;UBERON:0001280,1.51e-08,3;UBERON:0004647,1.51e-08,3;UBERON:0005171,1.51e-08,3 | |||
|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82303003295338,1.74306691720059,3.499054691372,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,5.37845022021834,0.762520775695299,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,1.75380354101505,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52322084867518,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0,55.9692553488556,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@MYO1D | |||
}} |
Revision as of 12:58, 11 September 2013
Short description: | p5@MYO1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MYO1D_5end |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | -213bp_to_ENST00000394649_5end |
EntrezGene: | MYO1D |
HGNC: | 7598 |
UniProt: | F2Z2U7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.29e-19 | 19 |
cortical cell of adrenal gland | 1.48e-12 | 2 |
endothelial cell of sinusoid | 3.62e-12 | 2 |
endothelial cell of hepatic sinusoid | 3.62e-12 | 2 |
lining cell | 1.12e-09 | 58 |
barrier cell | 1.12e-09 | 58 |
steroid hormone secreting cell | 8.31e-09 | 3 |
mesodermal cell | 8.60e-09 | 121 |
smooth muscle cell of the brain vasculature | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.34e-23 | 1 |
trunk blood vessel | 1.91e-13 | 7 |
hepatic sinusoid | 3.62e-12 | 2 |
abdomen blood vessel | 3.62e-12 | 2 |
sinusoid | 3.62e-12 | 2 |
abdominal segment blood vessel | 3.62e-12 | 2 |
adrenal gland | 8.31e-09 | 3 |
adrenal cortex | 8.31e-09 | 3 |
adrenal/interrenal gland | 8.31e-09 | 3 |
liver parenchyma | 1.51e-08 | 3 |
liver lobule | 1.51e-08 | 3 |
hepatic duct | 1.51e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.