FFCP PHASE1:Hg19::chr17:27253079..27253097,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57649|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20816|TSSclassifier=N|UniProt=Q2TAK2|association_with_transcript=-389bp_to_uc002hdh.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_19_at_PHF12_5end|id=chr17:27253079..27253097,-|ontology_enrichment_celltype=CL:0000738!2.47e-31!140;CL:0002057!8.44e-30!42;CL:0000860!2.49e-27!45;CL:0002087!1.44e-26!119;CL:0000766!2.04e-24!76;CL:0000037!3.29e-24!172;CL:0000566!3.29e-24!172;CL:0000988!3.87e-22!182;CL:0002032!7.27e-22!165;CL:0000837!7.27e-22!165;CL:0002031!1.05e-20!124;CL:0002194!4.01e-17!63;CL:0000576!4.01e-17!63;CL:0000040!4.01e-17!63;CL:0000559!4.01e-17!63;CL:0002009!2.13e-16!65;CL:0000624!9.32e-16!6;CL:0000094!9.84e-16!8;CL:0000763!6.71e-15!112;CL:0000049!6.71e-15!112;CL:0000839!9.12e-15!70;CL:0000557!1.81e-14!71;CL:0000791!3.55e-12!18;CL:0000789!3.55e-12!18;CL:0002420!3.55e-12!18;CL:0002419!3.55e-12!18;CL:0000790!3.55e-12!18;CL:0000081!4.28e-11!11;CL:0000898!4.46e-09!3;CL:0000842!2.07e-08!3;CL:0000623!2.23e-08!3;CL:0000825!2.23e-08!3;CL:0000084!3.73e-08!25;CL:0000827!3.73e-08!25;CL:0000767!5.26e-08!3;CL:0000838!3.66e-07!52;CL:0000134!4.90e-07!358;CL:0000542!5.78e-07!53;CL:0000051!5.78e-07!53;CL:0000771!9.02e-07!2|ontology_enrichment_celltype_v019=CL:0000898;6.25e-26;3!CL:0000771;1.97e-18;2!CL:0000815;6.81e-18;2!CL:0000792;6.81e-18;2!CL:0002677;6.81e-18;2!CL:0000094;1.21e-17;8!CL:0000624;2.84e-13;6!CL:0000081;6.95e-13;11!CL:0000775;1.40e-12;3!CL:0000895;8.17e-10;1!CL:0000860;2.24e-08;33!CL:0002057;2.24e-08;33|ontology_enrichment_celltype_v019_2=CL:0000898,7.41e-26,3;CL:0000771,2.06e-18,2;CL:0000815,1.04e-17,2;CL:0000792,1.04e-17,2;CL:0002677,1.04e-17,2;CL:0000094,1.22e-17,8;CL:0000624,3.09e-13,6;CL:0000081,6.95e-13,11;CL:0000775,1.36e-12,3;CL:0000738,3.81e-11,136;CL:0000766,5.49e-10,72;CL:0000810,6.31e-10,1;CL:0000895,6.31e-10,1;CL:0002436,6.31e-10,1;CL:0002427,6.31e-10,1;CL:0002428,6.31e-10,1;CL:0002429,6.31e-10,1;CL:0002433,6.31e-10,1;CL:0002431,6.31e-10,1;CL:0002432,6.31e-10,1;CL:0000037,1.58e-08,168;CL:0000988,5.80e-08,177;CL:0002032,1.07e-07,161;CL:0000837,1.07e-07,161;CL:0002087,7.34e-07,115|ontology_enrichment_development_v019=CL:0002427;8.17e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.89e-17!102;UBERON:0003061!4.89e-17!102;UBERON:0002193!9.62e-15!112;UBERON:0002371!3.96e-12!80;UBERON:0001474!7.52e-11!86;UBERON:0004765!2.39e-08!101;UBERON:0001434!2.39e-08!101;UBERON:0002405!3.55e-08!115;UBERON:0000178!2.92e-07!15;UBERON:0000179!2.92e-07!15;UBERON:0000463!2.92e-07!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0.929119112685311,0.863077176966451,0,0.709446689665756,1.37898272294647,0,6.77132432971709,0.188242339542605,0.272906150057846,0.224723484445085,1.53041946185451,1.60464513538047,2.55734850319616,0,0.199463657621632,0.426224750532694,0,0,0,0.502497330513487,0,1.08594422352558,0,0,0,0,0,0.209658645508376,0.673971786878971,0.300353785683013,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0.786839080455332,0.786021525498329,0.616804496998528,0,2.28145586643513,2.8406868344084,1.94826728407911,0,2.06224135232386,0.886135578334485,2.16643091012012,0,0,0,0,0,1.33457906845854,1.33770414044857,1.04535523804977,0,2.68254345521345,2.40539211837841,2.27717722817553,0,0,0,0,0.127986611154418,0,0,0,0.604820229674197,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,1.15508732651774,0,0,0,0,0,5.99205619157746,0,14.0901274568252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,2.37285620900479,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57649 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20816 | |||
|TSSclassifier=N | |||
|UniProt=Q2TAK2 | |||
|association_with_transcript=-389bp_to_uc002hdh.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_19_at_PHF12_5end | |||
|id=chr17:27253079..27253097,- | |||
|ontology_enrichment_celltype=CL:0000738!2.47e-31!140;CL:0002057!8.44e-30!42;CL:0000860!2.49e-27!45;CL:0002087!1.44e-26!119;CL:0000766!2.04e-24!76;CL:0000037!3.29e-24!172;CL:0000566!3.29e-24!172;CL:0000988!3.87e-22!182;CL:0002032!7.27e-22!165;CL:0000837!7.27e-22!165;CL:0002031!1.05e-20!124;CL:0002194!4.01e-17!63;CL:0000576!4.01e-17!63;CL:0000040!4.01e-17!63;CL:0000559!4.01e-17!63;CL:0002009!2.13e-16!65;CL:0000624!9.32e-16!6;CL:0000094!9.84e-16!8;CL:0000763!6.71e-15!112;CL:0000049!6.71e-15!112;CL:0000839!9.12e-15!70;CL:0000557!1.81e-14!71;CL:0000791!3.55e-12!18;CL:0000789!3.55e-12!18;CL:0002420!3.55e-12!18;CL:0002419!3.55e-12!18;CL:0000790!3.55e-12!18;CL:0000081!4.28e-11!11;CL:0000898!4.46e-09!3;CL:0000842!2.07e-08!3;CL:0000623!2.23e-08!3;CL:0000825!2.23e-08!3;CL:0000084!3.73e-08!25;CL:0000827!3.73e-08!25;CL:0000767!5.26e-08!3;CL:0000838!3.66e-07!52;CL:0000134!4.90e-07!358;CL:0000542!5.78e-07!53;CL:0000051!5.78e-07!53;CL:0000771!9.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000898;6.25e-26;3!CL:0000771;1.97e-18;2!CL:0000815;6.81e-18;2!CL:0000792;6.81e-18;2!CL:0002677;6.81e-18;2!CL:0000094;1.21e-17;8!CL:0000624;2.84e-13;6!CL:0000081;6.95e-13;11!CL:0000775;1.40e-12;3!CL:0000895;8.17e-10;1!CL:0000860;2.24e-08;33!CL:0002057;2.24e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,7.41e-26,3;CL:0000771,2.06e-18,2;CL:0000815,1.04e-17,2;CL:0000792,1.04e-17,2;CL:0002677,1.04e-17,2;CL:0000094,1.22e-17,8;CL:0000624,3.09e-13,6;CL:0000081,6.95e-13,11;CL:0000775,1.36e-12,3;CL:0000738,3.81e-11,136;CL:0000766,5.49e-10,72;CL:0000810,6.31e-10,1;CL:0000895,6.31e-10,1;CL:0002436,6.31e-10,1;CL:0002427,6.31e-10,1;CL:0002428,6.31e-10,1;CL:0002429,6.31e-10,1;CL:0002433,6.31e-10,1;CL:0002431,6.31e-10,1;CL:0002432,6.31e-10,1;CL:0000037,1.58e-08,168;CL:0000988,5.80e-08,177;CL:0002032,1.07e-07,161;CL:0000837,1.07e-07,161;CL:0002087,7.34e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002427;8.17e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.89e-17!102;UBERON:0003061!4.89e-17!102;UBERON:0002193!9.62e-15!112;UBERON:0002371!3.96e-12!80;UBERON:0001474!7.52e-11!86;UBERON:0004765!2.39e-08!101;UBERON:0001434!2.39e-08!101;UBERON:0002405!3.55e-08!115;UBERON:0000178!2.92e-07!15;UBERON:0000179!2.92e-07!15;UBERON:0000463!2.92e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0.929119112685311,0.863077176966451,0,0.709446689665756,1.37898272294647,0,6.77132432971709,0.188242339542605,0.272906150057846,0.224723484445085,1.53041946185451,1.60464513538047,2.55734850319616,0,0.199463657621632,0.426224750532694,0,0,0,0.502497330513487,0,1.08594422352558,0,0,0,0,0,0.209658645508376,0.673971786878971,0.300353785683013,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0.786839080455332,0.786021525498329,0.616804496998528,0,2.28145586643513,2.8406868344084,1.94826728407911,0,2.06224135232386,0.886135578334485,2.16643091012012,0,0,0,0,0,1.33457906845854,1.33770414044857,1.04535523804977,0,2.68254345521345,2.40539211837841,2.27717722817553,0,0,0,0,0.127986611154418,0,0,0,0.604820229674197,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,1.15508732651774,0,0,0,0,0,5.99205619157746,0,14.0901274568252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,2.37285620900479,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@PHF12 | |||
}} |
Revision as of 12:48, 11 September 2013
Short description: | p19@PHF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_PHF12_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -389bp_to_uc002hdh.1_5end |
EntrezGene: | PHF12 |
HGNC: | 20816 |
UniProt: | Q2TAK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 7.41e-26 | 3 |
eosinophil | 2.06e-18 | 2 |
regulatory T cell | 1.04e-17 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.04e-17 | 2 |
naive regulatory T cell | 1.04e-17 | 2 |
granulocyte | 1.22e-17 | 8 |
CD4-positive, alpha-beta T cell | 3.09e-13 | 6 |
blood cell | 6.95e-13 | 11 |
neutrophil | 1.36e-12 | 3 |
leukocyte | 3.81e-11 | 136 |
myeloid leukocyte | 5.49e-10 | 72 |
CD4-positive, alpha-beta thymocyte | 6.31e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.31e-10 | 1 |
mature CD4 single-positive thymocyte | 6.31e-10 | 1 |
resting double-positive thymocyte | 6.31e-10 | 1 |
double-positive blast | 6.31e-10 | 1 |
CD69-positive double-positive thymocyte | 6.31e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.31e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.31e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.31e-10 | 1 |
hematopoietic stem cell | 1.58e-08 | 168 |
hematopoietic cell | 5.80e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.07e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-07 | 161 |
nongranular leukocyte | 7.34e-07 | 115 |
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